BLASTX nr result

ID: Ophiopogon22_contig00027585 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00027585
         (580 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020104091.1| fasciclin-like arabinogalactan protein 21 [A...    62   1e-07
ref|XP_010939965.1| PREDICTED: fasciclin-like arabinogalactan pr...    59   8e-07
ref|XP_008787970.1| PREDICTED: fasciclin-like arabinogalactan pr...    56   9e-06

>ref|XP_020104091.1| fasciclin-like arabinogalactan protein 21 [Ananas comosus]
          Length = 429

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
 Frame = +2

Query: 254 LVATLDPFPFLDTAASSYPLH-YSLSSRIAVNPPQQAQPGTP---LASILSNLGFQELSM 421
           LVA    F    +AAS+Y L  ++ S      PPQ A+       LA ILSNLGFQEL+M
Sbjct: 8   LVALALLFSATSSAASAYALPPFNQSPSPPPPPPQSAEEAHEVLLLAPILSNLGFQELAM 67

Query: 422 GFPFVASILPSPWSSPVTMLAPSDDS 499
             P ++S + S WS P+T+ APSDDS
Sbjct: 68  AVPALSSPVLSTWSGPLTLFAPSDDS 93


>ref|XP_010939965.1| PREDICTED: fasciclin-like arabinogalactan protein 21 [Elaeis
           guineensis]
          Length = 390

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = +2

Query: 320 SLSSRIAVNPPQQAQPGTPLASILSNLGFQELSMGFPFVASILPSPWSSPVTMLAPSDDS 499
           S +S     PPQ+      LA ILSNLGFQEL+M  P + S + S WS P+T+ APSDD+
Sbjct: 22  STASGSPAPPPQEPHQAFLLAPILSNLGFQELAMAVPAIYSPVLSAWSGPLTLFAPSDDT 81


>ref|XP_008787970.1| PREDICTED: fasciclin-like arabinogalactan protein 21 [Phoenix
           dactylifera]
          Length = 394

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +2

Query: 347 PPQQAQPGTPLASILSNLGFQELSMGFPFVASILPSPWSSPVTMLAPSDDS 499
           PPQ+      LA ILSNLGFQEL+M  P + S + S WS P+T+ A SDDS
Sbjct: 31  PPQEPHQAFLLAPILSNLGFQELAMAVPALYSPVLSAWSGPLTLFASSDDS 81


Top