BLASTX nr result

ID: Ophiopogon22_contig00027238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00027238
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus o...   114   4e-27
ref|XP_010917669.1| PREDICTED: protein CHROMATIN REMODELING 35-l...    59   1e-07

>ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus officinalis]
 gb|ONK59645.1| uncharacterized protein A4U43_C08F8750 [Asparagus officinalis]
          Length = 928

 Score =  114 bits (286), Expect = 4e-27
 Identities = 67/123 (54%), Positives = 81/123 (65%)
 Frame = -2

Query: 369 PSSMYQQVGDVIDLEEPKVPESNTRNDVTSAIVVDSDDEDGNRHVQKMQPSSLDRFHDFR 190
           PS   +++ DVIDLEEP+  +  T  D  S IVVDSDDEDG++ VQK QPS     HDFR
Sbjct: 79  PSPGSKEMKDVIDLEEPQESKDKTGADTMSVIVVDSDDEDGSQQVQK-QPS----LHDFR 133

Query: 189 ARLSSQMEERLKRNRLSAGAASSALQVSVEQAIATEGKRLPSIQYEKAVLRNVTEKQLAS 10
           A L+SQM ERL++N+    A+ S L +S     A E K+LPSIQYEK VL N  EK LAS
Sbjct: 134 AWLNSQMAERLRKNKSPLVASDSILPLSCVPGNAIEAKKLPSIQYEKVVLHNAAEKHLAS 193

Query: 9   NLE 1
            LE
Sbjct: 194 KLE 196


>ref|XP_010917669.1| PREDICTED: protein CHROMATIN REMODELING 35-like isoform X1 [Elaeis
           guineensis]
 ref|XP_010917670.1| PREDICTED: protein CHROMATIN REMODELING 35-like isoform X1 [Elaeis
           guineensis]
          Length = 988

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
 Frame = -2

Query: 366 SSMYQQVGDVIDLEEPKVPESNTRNDVTSAIVVDSDDEDGN-RHVQKMQPSSLDRFHDFR 190
           S+M +++  +        P++    + TS I++DSDDEDG  R   K    S  + H+F+
Sbjct: 141 STMQKKMRHITSGSSYLCPKTKEHKNKTSVIIIDSDDEDGVCRKGTKNSCISECQVHEFQ 200

Query: 189 ARLSSQMEERLKRNRLSAG-------AASSALQVSVEQAIATEGKRLPSIQYEKAVLRNV 31
           A LSS++   L++  L A        AAS    V      A  GK  PS+QYE  VL  V
Sbjct: 201 AWLSSELHLCLRQAGLLAWDGHSNQPAASERKNVKFAHDFAATGKVPPSVQYEAVVLSKV 260

Query: 30  TEKQLASNLE 1
            EKQ   +LE
Sbjct: 261 MEKQPIQDLE 270


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