BLASTX nr result
ID: Ophiopogon22_contig00026477
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00026477
(381 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020246063.1| nuclear pore complex protein NUP54 [Asparagu... 82 7e-16
gb|KFK44493.1| hypothetical protein AALP_AA1G264400 [Arabis alpina] 62 2e-08
ref|XP_021975993.1| nuclear pore complex protein NUP54-like [Hel... 60 2e-08
ref|XP_006484075.1| PREDICTED: nuclear pore complex protein NUP5... 60 6e-08
ref|XP_006438059.1| nuclear pore complex protein NUP54 [Citrus c... 60 6e-08
ref|XP_022545938.1| nuclear pore complex protein NUP54-like [Bra... 59 6e-08
ref|XP_021975992.1| nuclear pore complex protein NUP54-like [Hel... 60 6e-08
gb|OMO60470.1| Nucleoporin Nup54/Nup57/Nup44 [Corchorus capsularis] 60 6e-08
gb|OMO88180.1| Nucleoporin Nup54/Nup57/Nup44 [Corchorus olitorius] 60 6e-08
ref|XP_004252221.1| PREDICTED: nuclear pore complex protein NUP5... 60 8e-08
ref|XP_011041512.1| PREDICTED: nuclear pore complex protein NUP5... 60 8e-08
gb|PPD99179.1| hypothetical protein GOBAR_DD03794 [Gossypium bar... 60 8e-08
gb|KHG07379.1| Transcription elongation factor spt5 [Gossypium a... 60 8e-08
ref|XP_021631979.1| nuclear pore complex protein NUP54 [Manihot ... 60 8e-08
ref|XP_017619156.1| PREDICTED: nuclear pore complex protein NUP5... 60 8e-08
ref|XP_016692999.1| PREDICTED: nuclear pore complex protein NUP5... 60 8e-08
ref|XP_012479166.1| PREDICTED: nuclear pore complex protein NUP5... 60 8e-08
ref|XP_013657011.2| nuclear pore complex protein NUP54-like [Bra... 59 1e-07
emb|CDY54826.1| BnaC03g75780D [Brassica napus] 59 1e-07
ref|XP_009109834.1| PREDICTED: nuclear pore complex protein NUP5... 59 1e-07
>ref|XP_020246063.1| nuclear pore complex protein NUP54 [Asparagus officinalis]
gb|ONK58210.1| uncharacterized protein A4U43_C09F9620 [Asparagus officinalis]
Length = 403
Score = 82.4 bits (202), Expect = 7e-16
Identities = 55/122 (45%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSNXXXXXXXXXXXXXXXXXXXXXXXXXXG-- 176
PAFGAPSSTPAFGTPS+TPAFGTPS AFS+
Sbjct: 55 PAFGAPSSTPAFGTPSSTPAFGTPSALAFSSNLFQPQQQQQQQQSPFGGFGQPQATPPSM 114
Query: 177 FRDLDEFVVQ-AEDXXXXXXXXXXXXXXIIDAYKEEPANQKFAYRHLLFSVC-LALRIQQ 350
F + Q A IIDAYKEEPANQK+AYRHLLFSV A R++
Sbjct: 115 FNVQPQITTQMAPVAPISLSLADRDIQAIIDAYKEEPANQKYAYRHLLFSVIDPAARVKP 174
Query: 351 LG 356
+G
Sbjct: 175 VG 176
Score = 53.9 bits (128), Expect = 8e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFGAPSSTPAFGTPS+TPAFG PS++
Sbjct: 37 PAFGAPSSTPAFGTPSSTPAFGAPSST 63
>gb|KFK44493.1| hypothetical protein AALP_AA1G264400 [Arabis alpina]
Length = 363
Score = 61.6 bits (148), Expect = 2e-08
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PSSTPAFGTPS+TPAFGTPSTS+FS+
Sbjct: 9 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFSS 39
>ref|XP_021975993.1| nuclear pore complex protein NUP54-like [Helianthus annuus]
Length = 215
Score = 60.1 bits (144), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFG PSSTPAFGTPS+TPAFGTPSTS+F+
Sbjct: 27 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFA 56
Score = 54.3 bits (129), Expect = 3e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 18 PAFGTPSSTPAFGTPSSTPAFGTPSST 44
>ref|XP_006484075.1| PREDICTED: nuclear pore complex protein NUP54 [Citrus sinensis]
dbj|GAY44088.1| hypothetical protein CUMW_079550 [Citrus unshiu]
Length = 359
Score = 60.1 bits (144), Expect = 6e-08
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PSSTPAFGTPS+TPAFGTPSTS+F +
Sbjct: 9 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFGS 39
>ref|XP_006438059.1| nuclear pore complex protein NUP54 [Citrus clementina]
gb|ESR51299.1| hypothetical protein CICLE_v10031923mg [Citrus clementina]
Length = 359
Score = 60.1 bits (144), Expect = 6e-08
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PSSTPAFGTPS+TPAFGTPSTS+F +
Sbjct: 9 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFGS 39
>ref|XP_022545938.1| nuclear pore complex protein NUP54-like [Brassica napus]
Length = 230
Score = 59.3 bits (142), Expect = 6e-08
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PS+TPAFGTPS+TPAFGTPSTS+F++
Sbjct: 44 PAFGTPSATPAFGTPSSTPAFGTPSTSSFAS 74
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS TPAFGTPS++
Sbjct: 35 PAFGTPSSTPAFGTPSATPAFGTPSST 61
>ref|XP_021975992.1| nuclear pore complex protein NUP54-like [Helianthus annuus]
gb|OTG17038.1| hypothetical protein HannXRQ_Chr08g0207671 [Helianthus annuus]
Length = 383
Score = 60.1 bits (144), Expect = 6e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFG PSSTPAFGTPS+TPAFGTPSTS+F+
Sbjct: 27 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFA 56
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 18 PAFGTPSSTPAFGTPSSTPAFGTPSST 44
>gb|OMO60470.1| Nucleoporin Nup54/Nup57/Nup44 [Corchorus capsularis]
Length = 389
Score = 60.1 bits (144), Expect = 6e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFG PSSTPAFGTPS+TPAFGTPSTS+F+
Sbjct: 36 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFA 65
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 18 PAFGTPSSTPAFGTPSSTPAFGTPSST 44
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 27 PAFGTPSSTPAFGTPSSTPAFGTPSST 53
>gb|OMO88180.1| Nucleoporin Nup54/Nup57/Nup44 [Corchorus olitorius]
Length = 417
Score = 60.1 bits (144), Expect = 6e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFG PSSTPAFGTPS+TPAFGTPSTS+F+
Sbjct: 36 PAFGTPSSTPAFGTPSSTPAFGTPSTSSFA 65
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 18 PAFGTPSSTPAFGTPSSTPAFGTPSST 44
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 27 PAFGTPSSTPAFGTPSSTPAFGTPSST 53
>ref|XP_004252221.1| PREDICTED: nuclear pore complex protein NUP54 [Solanum
lycopersicum]
Length = 388
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAF 89
PAFG PSSTPAFGTPS+TPAFGTPSTS+F
Sbjct: 31 PAFGTPSSTPAFGTPSSTPAFGTPSTSSF 59
>ref|XP_011041512.1| PREDICTED: nuclear pore complex protein NUP54 [Populus euphratica]
Length = 389
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PSSTPAFGTPS+TPAFGTPST AF++
Sbjct: 36 PAFGTPSSTPAFGTPSSTPAFGTPSTPAFAS 66
>gb|PPD99179.1| hypothetical protein GOBAR_DD03794 [Gossypium barbadense]
Length = 390
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFGAPSSTPAFGTPS+TPAFGTPST +F+
Sbjct: 72 PAFGAPSSTPAFGTPSSTPAFGTPSTPSFA 101
Score = 53.9 bits (128), Expect = 8e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFGAPSSTPAFG PS+TPAFGTPS++
Sbjct: 63 PAFGAPSSTPAFGAPSSTPAFGTPSST 89
>gb|KHG07379.1| Transcription elongation factor spt5 [Gossypium arboreum]
Length = 390
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFGAPSSTPAFGTPS+TPAFGTPST +F+
Sbjct: 72 PAFGAPSSTPAFGTPSSTPAFGTPSTPSFA 101
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 45 PAFGTPSSTPAFGTPSSTPAFGTPSST 71
>ref|XP_021631979.1| nuclear pore complex protein NUP54 [Manihot esculenta]
gb|OAY32446.1| hypothetical protein MANES_13G018200 [Manihot esculenta]
Length = 401
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFGAPSSTPAFGTPS+TPAFGTPST +F+
Sbjct: 53 PAFGAPSSTPAFGTPSSTPAFGTPSTPSFA 82
>ref|XP_017619156.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
arboreum]
ref|XP_017618031.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
arboreum]
ref|XP_017646957.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
arboreum]
Length = 424
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFGAPSSTPAFGTPS+TPAFGTPST +F+
Sbjct: 72 PAFGAPSSTPAFGTPSSTPAFGTPSTPSFA 101
Score = 54.3 bits (129), Expect = 6e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS+TPAFGTPS++
Sbjct: 45 PAFGTPSSTPAFGTPSSTPAFGTPSST 71
>ref|XP_016692999.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
hirsutum]
ref|XP_016693000.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
hirsutum]
ref|XP_016693001.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
hirsutum]
ref|XP_016693002.1| PREDICTED: nuclear pore complex protein NUP54-like [Gossypium
hirsutum]
Length = 424
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFGAPSSTPAFGTPS+TPAFGTPST +F+
Sbjct: 72 PAFGAPSSTPAFGTPSSTPAFGTPSTPSFA 101
Score = 53.9 bits (128), Expect = 8e-06
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFGAPSSTPAFG PS+TPAFGTPS++
Sbjct: 63 PAFGAPSSTPAFGAPSSTPAFGTPSST 89
>ref|XP_012479166.1| PREDICTED: nuclear pore complex protein NUP54 [Gossypium raimondii]
ref|XP_012479167.1| PREDICTED: nuclear pore complex protein NUP54 [Gossypium raimondii]
ref|XP_012479168.1| PREDICTED: nuclear pore complex protein NUP54 [Gossypium raimondii]
ref|XP_012479169.1| PREDICTED: nuclear pore complex protein NUP54 [Gossypium raimondii]
ref|XP_012479170.1| PREDICTED: nuclear pore complex protein NUP54 [Gossypium raimondii]
gb|KJB30943.1| hypothetical protein B456_005G168700 [Gossypium raimondii]
gb|KJB30944.1| hypothetical protein B456_005G168700 [Gossypium raimondii]
Length = 425
Score = 59.7 bits (143), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFS 92
PAFGAPSSTPAFGTPS+TPAFGTPST +F+
Sbjct: 72 PAFGAPSSTPAFGTPSSTPAFGTPSTPSFA 101
>ref|XP_013657011.2| nuclear pore complex protein NUP54-like [Brassica napus]
Length = 385
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PS+TPAFGTPS+TPAFGTPSTS+F++
Sbjct: 35 PAFGTPSATPAFGTPSSTPAFGTPSTSSFAS 65
Score = 53.9 bits (128), Expect = 8e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS TPAFGTPS++
Sbjct: 26 PAFGTPSSTPAFGTPSATPAFGTPSST 52
>emb|CDY54826.1| BnaC03g75780D [Brassica napus]
Length = 386
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PS+TPAFGTPS+TPAFGTPSTS+F++
Sbjct: 35 PAFGTPSATPAFGTPSSTPAFGTPSTSSFAS 65
Score = 53.9 bits (128), Expect = 8e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS TPAFGTPS++
Sbjct: 26 PAFGTPSSTPAFGTPSATPAFGTPSST 52
>ref|XP_009109834.1| PREDICTED: nuclear pore complex protein NUP54 [Brassica rapa]
ref|XP_022545914.1| nuclear pore complex protein NUP54 [Brassica napus]
Length = 399
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTSAFSN 95
PAFG PS+TPAFGTPS+TPAFGTPSTS+F++
Sbjct: 44 PAFGTPSATPAFGTPSSTPAFGTPSTSSFAS 74
Score = 53.9 bits (128), Expect = 8e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 3 PAFGAPSSTPAFGTPSTTPAFGTPSTS 83
PAFG PSSTPAFGTPS TPAFGTPS++
Sbjct: 35 PAFGTPSSTPAFGTPSATPAFGTPSST 61