BLASTX nr result
ID: Ophiopogon22_contig00026193
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00026193
(430 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA63792.1| Retrovirus-related Pol polyprotein from transposo... 94 4e-27
ref|XP_012701436.1| uncharacterized protein LOC105914402 [Setari... 88 2e-26
gb|PKA64299.1| Retrovirus-related Pol polyprotein from transposo... 83 5e-26
gb|PKI35327.1| hypothetical protein CRG98_044277 [Punica granatum] 90 5e-26
ref|XP_020190442.1| uncharacterized protein LOC109776199 [Aegilo... 84 7e-26
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 85 1e-25
ref|XP_020167355.1| uncharacterized protein LOC109752848 [Aegilo... 88 1e-25
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 90 2e-25
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa] 90 2e-25
gb|PKI55365.1| hypothetical protein CRG98_024216 [Punica granatum] 88 2e-25
gb|PKI60653.1| hypothetical protein CRG98_018954 [Punica granatum] 91 2e-25
ref|XP_020197777.1| uncharacterized protein LOC109783596 [Aegilo... 89 3e-25
ref|XP_020182317.1| uncharacterized protein LOC109767985 [Aegilo... 89 3e-25
gb|PKI67820.1| hypothetical protein CRG98_011793 [Punica granatum] 83 4e-25
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 89 6e-25
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 89 6e-25
gb|PKA61094.1| Retrovirus-related Pol polyprotein from transposo... 92 7e-25
ref|XP_020188800.1| uncharacterized protein LOC109774489 [Aegilo... 86 9e-25
ref|XP_018824623.1| PREDICTED: uncharacterized protein LOC108994... 79 9e-25
ref|XP_020198559.1| uncharacterized protein LOC109784385 [Aegilo... 93 1e-24
>gb|PKA63792.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 500
Score = 94.0 bits (232), Expect(2) = 4e-27
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 45 LLIGLSFFQH--HLQPAYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNT 218
+L GL F +H H A+SD DWA DRR GF+ FLG+NLIS SSKKQ V+RS+T
Sbjct: 320 ILYGLQFHRHSSHTLHAFSDADWAGSPTDRRSTGGFAIFLGNNLISWSSKKQPTVSRSST 379
Query: 219 KS*YKAMANATCELIWVQSLLPELGVSLSSS 311
++ YKA+ANAT EL+W+QSLL EL + ++ +
Sbjct: 380 EAEYKAIANATAELVWLQSLLNELHLPVTGT 410
Score = 55.1 bits (131), Expect(2) = 4e-27
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y TAN VFHARTKH+EID++ V+ERVA
Sbjct: 415 CDNIGATYLTANPVFHARTKHVEIDFHFVRERVA 448
>ref|XP_012701436.1| uncharacterized protein LOC105914402 [Setaria italica]
Length = 993
Score = 87.8 bits (216), Expect(3) = 2e-26
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +3
Query: 78 LQPAYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCE 257
L A+SD DWA D +DRR GF+ FLGSNLI+ S++KQ V+RS+T++ YKA+ANAT E
Sbjct: 837 LVSAFSDADWAGDVDDRRSTGGFAVFLGSNLIAWSARKQATVSRSSTEAEYKAVANATAE 896
Query: 258 LIWVQSLLPELGV 296
++W+Q LL ELG+
Sbjct: 897 IMWIQILLYELGI 909
Score = 54.3 bits (129), Expect(3) = 2e-26
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y +AN VFHARTKHIE+DY+ V+ERVA
Sbjct: 919 CDNIGAKYLSANPVFHARTKHIEVDYHFVRERVA 952
Score = 24.6 bits (52), Expect(3) = 2e-26
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 8 AVKCILSYLKHTITHRLVIFPTS 76
AVK IL YLKHT+ L I TS
Sbjct: 812 AVKRILRYLKHTMKIGLRISKTS 834
>gb|PKA64299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 392
Score = 82.8 bits (203), Expect(3) = 5e-26
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +3
Query: 45 LLIGLSFFQHHLQP----AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARS 212
+L GL+ HH P A+SD DW DRR GF+ FLG NL+S +SKKQ V+RS
Sbjct: 212 ILYGLTI--HHHTPFTFHAFSDADWGGSPEDRRSTGGFAIFLGKNLVSWTSKKQPTVSRS 269
Query: 213 NTKS*YKAMANATCELIWVQSLLPELGV 296
+T+ YKA+ANA ELIW+QSLL EL +
Sbjct: 270 STEVEYKAIANANAELIWLQSLLIELQI 297
Score = 55.1 bits (131), Expect(3) = 5e-26
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y TAN +FHARTKHIEID++ V+ERVA
Sbjct: 307 CDNIGATYLTANPIFHARTKHIEIDFHFVRERVA 340
Score = 27.7 bits (60), Expect(3) = 5e-26
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 8 AVKCILSYLKHTITHRLVI 64
AVKCIL YLK TI + L I
Sbjct: 200 AVKCILRYLKSTILYGLTI 218
>gb|PKI35327.1| hypothetical protein CRG98_044277 [Punica granatum]
Length = 150
Score = 90.1 bits (222), Expect(3) = 5e-26
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +3
Query: 90 YSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIWV 269
+SD DWA + +DRR V GF FLGSN +S SSKKQ VARS+T+S YK++ANAT E++W+
Sbjct: 40 FSDTDWAGNPDDRRSVSGFIVFLGSNPVSWSSKKQRTVARSSTESEYKSLANATAEILWL 99
Query: 270 QSLLPELGVS 299
QSLL ELGVS
Sbjct: 100 QSLLRELGVS 109
Score = 49.3 bits (116), Expect(3) = 5e-26
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYY 409
CDNI V Y TAN +FHARTKHIEIDY+
Sbjct: 118 CDNISVFYLTANPIFHARTKHIEIDYH 144
Score = 26.2 bits (56), Expect(3) = 5e-26
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 5 IAVKCILSYLKHTITHRLVIFPTSLAT 85
+AVK IL YLK TIT+ L I P +++
Sbjct: 10 MAVKHILRYLKGTITYGLHIRPGPISS 36
>ref|XP_020190442.1| uncharacterized protein LOC109776199 [Aegilops tauschii subsp.
tauschii]
Length = 340
Score = 84.3 bits (207), Expect(3) = 7e-26
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
A+SD DWA +DRR G++ F G NLI+ S++KQ V+RS+T++ YKA+ANA ELIW
Sbjct: 184 AFSDADWAGSLDDRRSTGGYAVFFGRNLIAWSARKQATVSRSSTEAEYKAVANAMAELIW 243
Query: 267 VQSLLPELGVS 299
VQS+L ELGVS
Sbjct: 244 VQSMLRELGVS 254
Score = 54.3 bits (129), Expect(3) = 7e-26
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y ++N VFHARTKHIE+DY+ V+ERVA
Sbjct: 263 CDNIAATYLSSNPVFHARTKHIEVDYHFVRERVA 296
Score = 26.6 bits (57), Expect(3) = 7e-26
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 8 AVKCILSYLKHTITHRLVIFPTS 76
AVK IL YL HT+T+ L + TS
Sbjct: 156 AVKRILRYLSHTVTYGLHLRSTS 178
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gb|AAP54977.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1031
Score = 84.7 bits (208), Expect(3) = 1e-25
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +3
Query: 78 LQPAYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCE 257
L A+SD DWA +DRR GF+ F+G NL+S S++KQ V+RS+T++ YKA+ANAT E
Sbjct: 875 LVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAE 934
Query: 258 LIWVQSLLPELGVSL 302
++W+Q+LL ELG+ +
Sbjct: 935 IMWIQTLLHELGIQV 949
Score = 56.2 bits (134), Expect(3) = 1e-25
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y TAN VFHARTKHIE+DY+ V+ERVA
Sbjct: 957 CDNIGAKYMTANPVFHARTKHIEVDYHFVRERVA 990
Score = 23.1 bits (48), Expect(3) = 1e-25
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 5 IAVKCILSYLKHTI 46
+A K IL YLKHT+
Sbjct: 849 VAAKRILRYLKHTV 862
>ref|XP_020167355.1| uncharacterized protein LOC109752848 [Aegilops tauschii subsp.
tauschii]
Length = 336
Score = 87.8 bits (216), Expect(3) = 1e-25
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
A+SD DWA +DRR G++ F G NLI+ S++KQ V+RS+T++ YKA+ANAT ELIW
Sbjct: 178 AFSDADWAGSLDDRRSTGGYAVFFGDNLIAWSARKQATVSRSSTEAEYKAVANATAELIW 237
Query: 267 VQSLLPELGVS 299
VQSLL ELGVS
Sbjct: 238 VQSLLRELGVS 248
Score = 51.6 bits (122), Expect(3) = 1e-25
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y ++N VFHAR KHIE+DY+ V+ERVA
Sbjct: 257 CDNIGATYLSSNPVFHARIKHIEVDYHFVRERVA 290
Score = 24.6 bits (52), Expect(3) = 1e-25
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 8 AVKCILSYLKHTITHRLVIFPTS 76
AVK IL YL HT+++ L + TS
Sbjct: 150 AVKRILRYLSHTVSNGLHLRSTS 172
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 90.1 bits (222), Expect(2) = 2e-25
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
A+SD DWA S+DRR GF+ FLG NLIS S++KQ V+RS+T++ YKA+ANAT E+IW
Sbjct: 763 AFSDADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIW 822
Query: 267 VQSLLPELGVS 299
+Q+LL ELGVS
Sbjct: 823 IQTLLKELGVS 833
Score = 53.5 bits (127), Expect(2) = 2e-25
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERV 427
CDNI Y +AN VFHARTKHIE+DY+ V+ERV
Sbjct: 842 CDNIGATYLSANPVFHARTKHIEVDYHFVRERV 874
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa]
Length = 1087
Score = 90.1 bits (222), Expect(2) = 2e-25
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
A+SD DWA S+DRR GF+ FLG NLIS S++KQ V+RS+T++ YKA+ANAT E+IW
Sbjct: 929 AFSDADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIW 988
Query: 267 VQSLLPELGVS 299
+Q+LL ELGVS
Sbjct: 989 IQTLLKELGVS 999
Score = 53.5 bits (127), Expect(2) = 2e-25
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERV 427
CDNI Y +AN VFHARTKHIE+DY+ V+ERV
Sbjct: 1008 CDNIGATYLSANPVFHARTKHIEVDYHFVRERV 1040
>gb|PKI55365.1| hypothetical protein CRG98_024216 [Punica granatum]
Length = 577
Score = 87.8 bits (216), Expect(2) = 2e-25
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +3
Query: 90 YSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIWV 269
+SD DWA + +DRR V GF FLGSN +S SSKK +VA+S+T+S YK++ANAT E++W+
Sbjct: 415 FSDADWAGNPDDRRSVGGFIIFLGSNPVSYSSKKHRIVAQSSTESEYKSLANATAEILWL 474
Query: 270 QSLLPELGVS 299
QSLL ELGVS
Sbjct: 475 QSLLQELGVS 484
Score = 55.8 bits (133), Expect(2) = 2e-25
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQER 424
CDNIF +Y AN +FHARTKHIEIDY+ V+ER
Sbjct: 493 CDNIFAIYLMANPIFHARTKHIEIDYHFVRER 524
>gb|PKI60653.1| hypothetical protein CRG98_018954 [Punica granatum]
Length = 147
Score = 90.5 bits (223), Expect(3) = 2e-25
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +3
Query: 90 YSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIWV 269
+SD +WA + +DRR V GF FLGSN +S SSKKQ +VARS+TKS YK++ANAT E++W+
Sbjct: 40 FSDANWAGNPDDRRSVSGFVIFLGSNPVSWSSKKQRIVARSSTKSEYKSLANATAEILWL 99
Query: 270 QSLLPELGVS 299
QSLL ELG+S
Sbjct: 100 QSLLKELGIS 109
Score = 48.5 bits (114), Expect(3) = 2e-25
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQ 418
CDNI +Y T N +FHARTKHIEIDY+ ++
Sbjct: 118 CDNISAIYLTVNPIFHARTKHIEIDYHFLK 147
Score = 24.6 bits (52), Expect(3) = 2e-25
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 8 AVKCILSYLKHTITHRLVIFPTSLAT 85
AVK IL Y K TIT L I P+S ++
Sbjct: 11 AVKRILQYPKGTITGGLHIHPSSTSS 36
>ref|XP_020197777.1| uncharacterized protein LOC109783596 [Aegilops tauschii subsp.
tauschii]
Length = 1355
Score = 89.0 bits (219), Expect(2) = 3e-25
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
AYSD DWA +DRR G++ F GS LI+ S++KQ V+RS+T++ YK +ANAT E+IW
Sbjct: 1199 AYSDADWAGSPDDRRSTGGYAVFFGSTLIAWSARKQATVSRSSTEAEYKVVANATAEIIW 1258
Query: 267 VQSLLPELGVSLSSSDFM 320
+QSLL ELG+S S S +
Sbjct: 1259 IQSLLQELGISQSQSPIL 1276
Score = 53.9 bits (128), Expect(2) = 3e-25
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y +AN VFHARTKHIE+DY+ V+ERV+
Sbjct: 1278 CDNIGATYLSANPVFHARTKHIEVDYHFVRERVS 1311
>ref|XP_020182317.1| uncharacterized protein LOC109767985 [Aegilops tauschii subsp.
tauschii]
Length = 331
Score = 89.4 bits (220), Expect(2) = 3e-25
Identities = 41/70 (58%), Positives = 57/70 (81%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
AYSD DWAD +DRR GF+ FLG+NL+S S++KQ V+RS+T++ YKA+ANAT E++W
Sbjct: 178 AYSDADWADCPDDRRSTGGFAVFLGTNLVSWSARKQATVSRSSTEAEYKALANATAEVMW 237
Query: 267 VQSLLPELGV 296
+Q+LL ELG+
Sbjct: 238 IQTLLYELGI 247
Score = 53.5 bits (127), Expect(2) = 3e-25
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y +AN VFHARTKHIE+D++ V+ERVA
Sbjct: 257 CDNIGATYLSANPVFHARTKHIEVDFHFVRERVA 290
>gb|PKI67820.1| hypothetical protein CRG98_011793 [Punica granatum]
Length = 193
Score = 83.2 bits (204), Expect(3) = 4e-25
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +3
Query: 90 YSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIWV 269
+SDVDWA + +DRR + F FLGSN +S SKKQ +ARS+T+S YK++ANAT E++W+
Sbjct: 31 FSDVDWAGNPDDRRSISDFIVFLGSNPVSWRSKKQRTIARSSTESAYKSLANATAEILWL 90
Query: 270 QSLLPELGVS 299
QSLL EL VS
Sbjct: 91 QSLLRELEVS 100
Score = 52.0 bits (123), Expect(3) = 4e-25
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQER 424
CDNI +Y T N +FH RTKHIEIDY+ V+ER
Sbjct: 109 CDNISTIYLTTNHIFHVRTKHIEIDYHFVRER 140
Score = 27.3 bits (59), Expect(3) = 4e-25
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 5 IAVKCILSYLKHTITHRLVIFPTSLAT 85
+AVK IL YLK TIT+ L I P+ +++
Sbjct: 1 MAVKHILRYLKGTITYGLRIRPSPISS 27
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gb|ABF94109.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1247
Score = 89.4 bits (220), Expect(2) = 6e-25
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +3
Query: 39 TPLLIGLSFFQHHLQPAYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNT 218
T L + LS + L AYSD DWA +DRR GF+ FLG NL+S S++KQ V+RS+T
Sbjct: 1079 TRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSST 1138
Query: 219 KS*YKAMANATCELIWVQSLLPELGVSLSS 308
+S YKA+ANAT E++WVQ+LL EL V S
Sbjct: 1139 ESEYKALANATAEIMWVQTLLAELQVESPS 1168
Score = 52.4 bits (124), Expect(2) = 6e-25
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDN+ Y +AN VFHARTKHIE+DY+ V+ERV+
Sbjct: 1174 CDNLGAKYLSANPVFHARTKHIEVDYHFVRERVS 1207
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gb|AAP52036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1058
Score = 89.4 bits (220), Expect(2) = 6e-25
Identities = 42/71 (59%), Positives = 57/71 (80%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
AYSD DWAD +D+R GF+ FLGSNLIS +++KQ V+RS+T++ YKA+ANAT E++W
Sbjct: 899 AYSDADWADCLDDKRSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMW 958
Query: 267 VQSLLPELGVS 299
V+ LL ELG+S
Sbjct: 959 VRKLLEELGIS 969
Score = 52.4 bits (124), Expect(2) = 6e-25
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y + N VFHARTKHIEIDY+ V+E+VA
Sbjct: 978 CDNIGATYLSVNPVFHARTKHIEIDYHFVREQVA 1011
>gb|PKA61094.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 387
Score = 92.0 bits (227), Expect(2) = 7e-25
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Frame = +3
Query: 45 LLIGLSFFQH--HLQPAYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNT 218
+L G F +H H A+SD DWA NDRR GF+ FLG+NLIS SSKKQ V+RS+T
Sbjct: 212 ILYGPQFHRHSSHTLHAFSDADWAGSPNDRRSTGGFAIFLGNNLISWSSKKQSTVSRSST 271
Query: 219 KS*YKAMANATCELIWVQSLLPELGVSLSSS 311
++ YKA+ANA EL+W+QSLL EL + ++ +
Sbjct: 272 EAEYKAIANAIAELVWLQSLLNELHLPVTGT 302
Score = 49.7 bits (117), Expect(2) = 7e-25
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI TAN VFHA TKH+EID++ V+ERVA
Sbjct: 307 CDNIGATNLTANPVFHAHTKHVEIDFHFVRERVA 340
>ref|XP_020188800.1| uncharacterized protein LOC109774489 [Aegilops tauschii subsp.
tauschii]
Length = 499
Score = 86.3 bits (212), Expect(3) = 9e-25
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +3
Query: 90 YSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIWV 269
+SDVDWA S+DRR GF FLG NL+S SS+K+ V+RS+T+ YKA+AN T E+IW+
Sbjct: 345 FSDVDWAGCSDDRRSTGGFDVFLGPNLVSWSSRKRATVSRSSTECEYKAIANGTAEIIWI 404
Query: 270 QSLLPELGVSLS 305
QS+L ELG+ +S
Sbjct: 405 QSVLGELGIFMS 416
Score = 51.6 bits (122), Expect(3) = 9e-25
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDN+ Y +AN VFHARTKHIE+D++ ++ERVA
Sbjct: 423 CDNLGATYLSANPVFHARTKHIEVDFHFLRERVA 456
Score = 23.5 bits (49), Expect(3) = 9e-25
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 292 VFLSHPLILWCE 327
+F+S P ILWC+
Sbjct: 413 IFMSRPPILWCD 424
>ref|XP_018824623.1| PREDICTED: uncharacterized protein LOC108994009 [Juglans regia]
Length = 227
Score = 78.6 bits (192), Expect(3) = 9e-25
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = +3
Query: 87 AYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCELIW 266
AYSD DW +DRR G+ NF G N+++ SSKKQ VA S+T++ Y+A+AN T ELIW
Sbjct: 82 AYSDADWGGSPDDRRSTTGYCNFFGHNIVTWSSKKQTKVAWSSTEAEYQAIANTTAELIW 141
Query: 267 VQSLLPELGV 296
+QSL EL +
Sbjct: 142 LQSLYRELDI 151
Score = 52.8 bits (125), Expect(3) = 9e-25
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
CDNI Y TAN VFHARTKHIE+DY+ V+E V+
Sbjct: 161 CDNIGATYLTANLVFHARTKHIELDYHFVREHVS 194
Score = 30.0 bits (66), Expect(3) = 9e-25
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 8 AVKCILSYLKHTITHRLVIFPT 73
AVK IL YLKHT+ H ++I P+
Sbjct: 54 AVKHILRYLKHTVDHGILIRPS 75
>ref|XP_020198559.1| uncharacterized protein LOC109784385 [Aegilops tauschii subsp.
tauschii]
Length = 642
Score = 92.8 bits (229), Expect(2) = 1e-24
Identities = 44/73 (60%), Positives = 59/73 (80%)
Frame = +3
Query: 78 LQPAYSDVDWADDSNDRRFVDGFSNFLGSNLISRSSKKQCMVARSNTKS*YKAMANATCE 257
L PAYSD DWA ++DRR GF+ FLG+NLIS S++KQ V+RS+TK+ YKA+ANAT E
Sbjct: 502 LVPAYSDADWAGCADDRRSTGGFAVFLGTNLISCSARKQATVSRSSTKAEYKALANATAE 561
Query: 258 LIWVQSLLPELGV 296
++W+Q+LL ELG+
Sbjct: 562 VMWIQTLLYELGI 574
Score = 47.8 bits (112), Expect(2) = 1e-24
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 329 CDNIFVVYHTANSVFHARTKHIEIDYYLVQERVA 430
C NI Y +AN VFHARTKHIE+D++ ++R+A
Sbjct: 584 CGNIGATYLSANHVFHARTKHIEVDFHFAEKRIA 617