BLASTX nr result
ID: Ophiopogon22_contig00022691
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00022691
(351 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp... 212 2e-61
gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus... 212 2e-61
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ... 195 1e-55
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub... 194 3e-55
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 194 4e-55
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana... 182 3e-51
dbj|BAF07835.1| Os02g0152800, partial [Oryza sativa Japonica Gro... 173 2e-49
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi... 173 1e-47
ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V sub... 173 1e-47
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 173 1e-47
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 172 2e-47
ref|XP_023871679.1| DNA-directed RNA polymerase V subunit 1 [Que... 167 8e-46
ref|XP_020162274.1| DNA-directed RNA polymerase V subunit 1 [Aeg... 167 2e-45
gb|OVA16557.1| RNA polymerase [Macleaya cordata] 166 3e-45
ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V sub... 165 5e-45
dbj|GAV75269.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol... 165 5e-45
ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub... 164 1e-44
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub... 164 1e-44
gb|OMO87191.1| RNA polymerase, alpha subunit [Corchorus olitorius] 164 1e-44
gb|OMP00131.1| RNA polymerase, alpha subunit [Corchorus capsularis] 164 2e-44
>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
Length = 1945
Score = 212 bits (540), Expect = 2e-61
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +3
Query: 3 GTCRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSV 182
GTCR+LLPLEALNILKEIPEETKKRL AKG+F Q+GY+LQYLPVPPNCLLVPEISDGKSV
Sbjct: 176 GTCRTLLPLEALNILKEIPEETKKRLVAKGYFPQDGYILQYLPVPPNCLLVPEISDGKSV 235
Query: 183 MSSDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
MSSD+SISLLKRVL+KIELIKRSRSGSPNFESHEVECNDLQL I EYMHLRG+ KA
Sbjct: 236 MSSDISISLLKRVLSKIELIKRSRSGSPNFESHEVECNDLQLVIAEYMHLRGSAKA 291
>gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
Length = 1833
Score = 212 bits (540), Expect = 2e-61
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +3
Query: 3 GTCRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSV 182
GTCR+LLPLEALNILKEIPEETKKRL AKG+F Q+GY+LQYLPVPPNCLLVPEISDGKSV
Sbjct: 176 GTCRTLLPLEALNILKEIPEETKKRLVAKGYFPQDGYILQYLPVPPNCLLVPEISDGKSV 235
Query: 183 MSSDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
MSSD+SISLLKRVL+KIELIKRSRSGSPNFESHEVECNDLQL I EYMHLRG+ KA
Sbjct: 236 MSSDISISLLKRVLSKIELIKRSRSGSPNFESHEVECNDLQLVIAEYMHLRGSAKA 291
>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
Length = 1673
Score = 195 bits (496), Expect = 1e-55
Identities = 94/113 (83%), Positives = 105/113 (92%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR LLP EALNILKEIPEETKKRL+AKG+F Q G++LQYLPVPPNCL VPE+SDGKS+MS
Sbjct: 176 CRPLLPYEALNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMS 235
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
SD+SISLLKRVLNKIELIKRSRSG PNF+SHEVE NDLQ +I++YMHLRGTPK
Sbjct: 236 SDISISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPK 288
>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
Length = 1708
Score = 194 bits (493), Expect = 3e-55
Identities = 93/113 (82%), Positives = 105/113 (92%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR LLP EALNILKEIP+ETKKRL+AKG+F Q G++LQYLPVPPNCL VPE+SDGKS+MS
Sbjct: 176 CRPLLPYEALNILKEIPQETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMS 235
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
SD+SISLLKRVLNKIELIKRSRSG PNF+SHEVE NDLQ +I++YMHLRGTPK
Sbjct: 236 SDISISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPK 288
>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
subunit 1-like [Phoenix dactylifera]
Length = 1656
Score = 194 bits (492), Expect = 4e-55
Identities = 94/113 (83%), Positives = 105/113 (92%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR LLP EALNILKEIPEETKKRL+AKG+F Q G++LQYLPVPPNCL VPEISDGK++MS
Sbjct: 134 CRPLLPYEALNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEISDGKNIMS 193
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
SD+SISLLKRVLNKIELIKRSRSG PNF+SHEVE NDLQL+I++YM LRGTPK
Sbjct: 194 SDISISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQLSISQYMRLRGTPK 246
>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
Length = 1800
Score = 182 bits (463), Expect = 3e-51
Identities = 85/113 (75%), Positives = 100/113 (88%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR LLP EALNILKEIPEET+++L+ KG+F Q GY++Q+LPVPPNCL VPE SDGKS+MS
Sbjct: 179 CRPLLPCEALNILKEIPEETRRKLATKGYFPQTGYIMQHLPVPPNCLYVPEFSDGKSIMS 238
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SI+LLKRVLNKIE+IKRSRSGSPNFESHEVE DLQ ++ +YMHLRGT K
Sbjct: 239 FDISIALLKRVLNKIEMIKRSRSGSPNFESHEVESTDLQSSVAQYMHLRGTTK 291
>dbj|BAF07835.1| Os02g0152800, partial [Oryza sativa Japonica Group]
dbj|BAS77022.1| Os02g0152800, partial [Oryza sativa Japonica Group]
Length = 488
Score = 173 bits (438), Expect = 2e-49
Identities = 80/113 (70%), Positives = 102/113 (90%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP EALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 178 CRTLLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMS 237
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK+VL KIE IK+SR+GSPNFESHEVE DLQL+I +Y+HLRGT +
Sbjct: 238 YDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTR 290
>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
Length = 1867
Score = 173 bits (438), Expect = 1e-47
Identities = 80/113 (70%), Positives = 102/113 (90%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP EALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 178 CRTLLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMS 237
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK+VL KIE IK+SR+GSPNFESHEVE DLQL+I +Y+HLRGT +
Sbjct: 238 YDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTR 290
>ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza sativa
Japonica Group]
Length = 1962
Score = 173 bits (438), Expect = 1e-47
Identities = 80/113 (70%), Positives = 102/113 (90%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP EALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 178 CRTLLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMS 237
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK+VL KIE IK+SR+GSPNFESHEVE DLQL+I +Y+HLRGT +
Sbjct: 238 YDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTR 290
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 173 bits (438), Expect = 1e-47
Identities = 80/113 (70%), Positives = 102/113 (90%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP EALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 178 CRTLLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMS 237
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK+VL KIE IK+SR+GSPNFESHEVE DLQL+I +Y+HLRGT +
Sbjct: 238 YDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTR 290
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza
brachyantha]
Length = 1993
Score = 172 bits (436), Expect = 2e-47
Identities = 79/113 (69%), Positives = 102/113 (90%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP EALNILK+IP+ETK++L+A+G+ AQ GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 178 CRTLLPEEALNILKKIPDETKRKLAARGYIAQPGYVMKYLPVPPNCLYIPEFTDGQSIMS 237
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK+VL KIE IK+SR+GSPNFESHEVE +DLQL+I +Y+HLRGT +
Sbjct: 238 YDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESSDLQLSIAQYIHLRGTTR 290
>ref|XP_023871679.1| DNA-directed RNA polymerase V subunit 1 [Quercus suber]
gb|POE86758.1| dna-directed rna polymerase v subunit 1 [Quercus suber]
Length = 2041
Score = 167 bits (424), Expect = 8e-46
Identities = 78/113 (69%), Positives = 98/113 (86%)
Frame = +3
Query: 12 RSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSS 191
R+LLP E + +LK IP ET+K+LSAKG+F Q+GY+LQYLPVPPNCL VPEISDG SVMSS
Sbjct: 175 RTLLPCEVMEMLKRIPAETRKKLSAKGYFPQDGYILQYLPVPPNCLSVPEISDGVSVMSS 234
Query: 192 DVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
D SIS+LK+VL ++E+IK SRSG+PNF+SHEVE NDLQ+A+ +Y+ +RGT KA
Sbjct: 235 DPSISMLKKVLRQVEIIKSSRSGTPNFQSHEVEANDLQVAVNQYLQVRGTAKA 287
>ref|XP_020162274.1| DNA-directed RNA polymerase V subunit 1 [Aegilops tauschii subsp.
tauschii]
Length = 1947
Score = 167 bits (422), Expect = 2e-45
Identities = 77/113 (68%), Positives = 99/113 (87%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP+EA NILK+IP++TKK+L+A+GF AQ GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 180 CRTLLPVEAFNILKKIPDDTKKKLAARGFIAQPGYVMKYLPVPPNCLYIPEFTDGQSIMS 239
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK++L KIE IK+SRSGSPNFESH+ E DLQL+I +Y+ LRGT K
Sbjct: 240 YDISISLLKKILQKIEQIKKSRSGSPNFESHDSESADLQLSIGQYIQLRGTTK 292
>gb|OVA16557.1| RNA polymerase [Macleaya cordata]
Length = 1742
Score = 166 bits (420), Expect = 3e-45
Identities = 78/114 (68%), Positives = 95/114 (83%)
Frame = +3
Query: 9 CRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMS 188
CR+LLP E L ILK IP ETKK+LS KG+F Q+GY+LQ LPVPPNCL VP+ISDG S+MS
Sbjct: 87 CRTLLPCEVLEILKRIPAETKKKLSGKGYFPQDGYILQKLPVPPNCLSVPDISDGTSIMS 146
Query: 189 SDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
SD+S+S+LK+VL + E+IK SRSG PNFESHEVE +LQ AI +Y+H+RGT KA
Sbjct: 147 SDLSVSMLKKVLKQAEIIKTSRSGPPNFESHEVEATELQSAIAQYLHVRGTTKA 200
>ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Brachypodium
distachyon]
gb|KQJ92654.1| hypothetical protein BRADI_4g45065v3 [Brachypodium distachyon]
Length = 1954
Score = 165 bits (418), Expect = 5e-45
Identities = 73/112 (65%), Positives = 102/112 (91%)
Frame = +3
Query: 12 RSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSS 191
R+LLP EALNILK+IP++T+K+L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS
Sbjct: 179 RTLLPEEALNILKKIPDDTRKKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSY 238
Query: 192 DVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
D+SISLLK++L++IE IK+SR+G+PNFESHE E +DLQ++I +Y+HLRGT K
Sbjct: 239 DISISLLKKILHRIEQIKKSRAGTPNFESHEAESSDLQISIAQYIHLRGTTK 290
>dbj|GAV75269.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/DUF3223 domain-containing
protein [Cephalotus follicularis]
Length = 1964
Score = 165 bits (418), Expect = 5e-45
Identities = 75/115 (65%), Positives = 98/115 (85%)
Frame = +3
Query: 3 GTCRSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSV 182
G+ R+LLP E + ILK IP+ET+KRL+ KG+F Q+GYV+ YLPVPPNCL VPE+SDG SV
Sbjct: 173 GSTRTLLPCEVMEILKRIPQETRKRLAGKGYFPQDGYVIHYLPVPPNCLSVPEVSDGVSV 232
Query: 183 MSSDVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPK 347
MSSD+SIS+LK+V+ ++E+IK SRSG+PNFESHEVE NDLQ A+ +Y+ +RGT +
Sbjct: 233 MSSDLSISMLKKVIKQVEIIKSSRSGTPNFESHEVEANDLQSAVDQYLQVRGTSR 287
>ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1444
Score = 164 bits (416), Expect = 1e-44
Identities = 80/113 (70%), Positives = 98/113 (86%)
Frame = +3
Query: 12 RSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSS 191
R LLP EAL IL+++PEET+K+L+ KG+F QNG++++ LPVPPNCL VPEISDGK VMSS
Sbjct: 176 RPLLPSEALKILEKLPEETQKKLAGKGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSS 235
Query: 192 DVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
D+S SLLK++L KIELIKRSRSGSP+FES+EVE NDLQ +I YM+LRGT KA
Sbjct: 236 DISKSLLKKILGKIELIKRSRSGSPSFESYEVETNDLQSSIALYMNLRGTTKA 288
>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1738
Score = 164 bits (416), Expect = 1e-44
Identities = 80/113 (70%), Positives = 98/113 (86%)
Frame = +3
Query: 12 RSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSS 191
R LLP EAL IL+++PEET+K+L+ KG+F QNG++++ LPVPPNCL VPEISDGK VMSS
Sbjct: 176 RPLLPSEALKILEKLPEETQKKLAGKGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSS 235
Query: 192 DVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
D+S SLLK++L KIELIKRSRSGSP+FES+EVE NDLQ +I YM+LRGT KA
Sbjct: 236 DISKSLLKKILGKIELIKRSRSGSPSFESYEVETNDLQSSIALYMNLRGTTKA 288
>gb|OMO87191.1| RNA polymerase, alpha subunit [Corchorus olitorius]
Length = 1956
Score = 164 bits (415), Expect = 1e-44
Identities = 77/113 (68%), Positives = 95/113 (84%)
Frame = +3
Query: 12 RSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSS 191
R+LLP E +NILK+IP ET+++LS KGFF Q GY+L YLPVPPNCL VP+ISDG SVMSS
Sbjct: 174 RTLLPCEVVNILKKIPAETRRKLSGKGFFPQEGYILHYLPVPPNCLSVPDISDGVSVMSS 233
Query: 192 DVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
D+S S+LK+VL + E+I +SRSG+PNFESHEVE NDLQ A+ EY+ +RGT KA
Sbjct: 234 DLSTSMLKKVLKQTEIISKSRSGTPNFESHEVEANDLQFAVEEYLQVRGTVKA 286
>gb|OMP00131.1| RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 1928
Score = 164 bits (414), Expect = 2e-44
Identities = 77/113 (68%), Positives = 95/113 (84%)
Frame = +3
Query: 12 RSLLPLEALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSS 191
R+LLP E +NILK+IP ET+++LS KGFF Q GY+L YLPVPPNCL VP+ISDG SVMSS
Sbjct: 174 RTLLPCEVVNILKKIPAETRRKLSGKGFFPQEGYILHYLPVPPNCLSVPDISDGVSVMSS 233
Query: 192 DVSISLLKRVLNKIELIKRSRSGSPNFESHEVECNDLQLAITEYMHLRGTPKA 350
D+S S+LK+VL + E+I +SRSG+PNFESHEVE NDLQ A+ EY+ +RGT KA
Sbjct: 234 DLSTSMLKKVLKQTEIISKSRSGTPNFESHEVEANDLQYAVEEYLQVRGTVKA 286