BLASTX nr result

ID: Ophiopogon22_contig00022268 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00022268
         (735 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK62815.1| uncharacterized protein A4U43_C07F8420 [Asparagus...   155   1e-39
ref|XP_020275710.1| nuclear pore complex protein NUP214 [Asparag...   155   1e-39

>gb|ONK62815.1| uncharacterized protein A4U43_C07F8420 [Asparagus officinalis]
          Length = 1725

 Score =  155 bits (393), Expect = 1e-39
 Identities = 104/216 (48%), Positives = 126/216 (58%), Gaps = 15/216 (6%)
 Frame = -3

Query: 730  SSSSQYLLNEGMQNSHSQLLMEAQSNSGSKWAKDVLITSNIPGSQSHAEIGTERTSTLPX 551
            SSSS YLLNEG+Q+SHS++++E QSNSGSKWA+D+                TER STL  
Sbjct: 1020 SSSSWYLLNEGIQDSHSKVVVEPQSNSGSKWAQDI----------------TERNSTLSQ 1063

Query: 550  XXXXXXXXXXXXXXXRKELFSSPDITSTEATLLGDMSNPFAAKTVVSSRHTS-TFLTSTS 374
                           RK+LF SP I+S EA  +G +SNPF AKTV SSR+TS TF    S
Sbjct: 1064 SMSPSITTADSFERSRKDLFGSPPISSLEAMPVGHLSNPFTAKTVASSRNTSLTFSGPIS 1123

Query: 373  PMNLRQ-ALVNNQASKNLNLTSGASAPSLSMLGSTKHFPDSSDSVSSITND-------TV 218
            PMN  Q   V NQAS N+N TSG + P L  L S KH  DSS  +SSITN+       T+
Sbjct: 1124 PMNTGQIGDVRNQASTNMNQTSGGNTPVLPNLVSMKHVADSSVGISSITNENIFSPFSTL 1183

Query: 217  PVFTSA------TEFNRSPYRNQSSESTLNVTSHRK 128
            P  TSA      TEFN++   NQS+ES LN  S+ K
Sbjct: 1184 PCHTSAQLNGKTTEFNKTTIGNQSNESILNSASYPK 1219


>ref|XP_020275710.1| nuclear pore complex protein NUP214 [Asparagus officinalis]
          Length = 1743

 Score =  155 bits (393), Expect = 1e-39
 Identities = 104/216 (48%), Positives = 126/216 (58%), Gaps = 15/216 (6%)
 Frame = -3

Query: 730  SSSSQYLLNEGMQNSHSQLLMEAQSNSGSKWAKDVLITSNIPGSQSHAEIGTERTSTLPX 551
            SSSS YLLNEG+Q+SHS++++E QSNSGSKWA+D+                TER STL  
Sbjct: 1058 SSSSWYLLNEGIQDSHSKVVVEPQSNSGSKWAQDI----------------TERNSTLSQ 1101

Query: 550  XXXXXXXXXXXXXXXRKELFSSPDITSTEATLLGDMSNPFAAKTVVSSRHTS-TFLTSTS 374
                           RK+LF SP I+S EA  +G +SNPF AKTV SSR+TS TF    S
Sbjct: 1102 SMSPSITTADSFERSRKDLFGSPPISSLEAMPVGHLSNPFTAKTVASSRNTSLTFSGPIS 1161

Query: 373  PMNLRQ-ALVNNQASKNLNLTSGASAPSLSMLGSTKHFPDSSDSVSSITND-------TV 218
            PMN  Q   V NQAS N+N TSG + P L  L S KH  DSS  +SSITN+       T+
Sbjct: 1162 PMNTGQIGDVRNQASTNMNQTSGGNTPVLPNLVSMKHVADSSVGISSITNENIFSPFSTL 1221

Query: 217  PVFTSA------TEFNRSPYRNQSSESTLNVTSHRK 128
            P  TSA      TEFN++   NQS+ES LN  S+ K
Sbjct: 1222 PCHTSAQLNGKTTEFNKTTIGNQSNESILNSASYPK 1257


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