BLASTX nr result

ID: Ophiopogon22_contig00022212 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00022212
         (332 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257840.1| LOW QUALITY PROTEIN: U-box domain-containing...    58   2e-07

>ref|XP_020257840.1| LOW QUALITY PROTEIN: U-box domain-containing protein 30-like
           [Asparagus officinalis]
          Length = 442

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 34/55 (61%), Positives = 37/55 (67%)
 Frame = -2

Query: 166 MKLDTATQVIDVETAVKDGIFXXXXXXXXXXXGPVTAAACEKVDLKEMIDELDSA 2
           MKLDTATQVIDVETAVKDGIF             V +    KVDLK+MI+ELDSA
Sbjct: 1   MKLDTATQVIDVETAVKDGIFGGGGGGGGAPV--VRSPPANKVDLKKMIEELDSA 53


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