BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00021680
         (573 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indi...   149   3e-40
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   153   7e-40
gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   153   1e-39
gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposo...   149   4e-39
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     150   2e-38
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     150   2e-38
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...   149   3e-38
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-...   149   3e-38
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   149   3e-38
gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subc...   149   3e-38
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         149   3e-38
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   149   3e-38
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   149   3e-38
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   149   3e-38
gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japo...   149   3e-38
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   149   3e-38
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   149   3e-38
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] >g...   149   3e-38
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   149   3e-38
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   149   3e-38

>gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indica Group]
          Length = 360

 Score =  149 bits (376), Expect = 3e-40
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP + SV
Sbjct: 108 DERTCFVCGQPGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTIFSV 164

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GANIHVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 165 NQSTNWWVDTGANIHVCADISLFSSYQVARGSTVLMGNGSHLYVHGVGTVDLKFTSGKIV 224

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 225 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHRYFIGKGY 272


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score =  153 bits (387), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 113/171 (66%), Gaps = 6/171 (3%)
 Frame = +2

Query: 77  FCYVCGRSNHLAPQCFYRKKEPAKPAQ--KGNGTPKVNMIEGNPNSF----RLASSLPLV 238
           FC+VCGR+NH A  CF+R+++P       K +  P+ N+I  N +S     R   + P +
Sbjct: 148 FCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQANVITANASSDSPSNRYHVTSPEL 207

Query: 239 NSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSG 418
           N + +S DWW+DSGAN+HVC D+  FS+YQE    ++S+ + S  +++G G +EL ++SG
Sbjct: 208 NFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGRVELELSSG 267

Query: 419 KALNLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
             L L  V HV  +R+NLIS +LL++ GF++V ESN+ VI+++  F+GKG+
Sbjct: 268 NCLVLDEVFHVSEIRKNLISAALLVQQGFKVVFESNRVVISRHGSFVGKGY 318


>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score =  153 bits (387), Expect = 1e-39
 Identities = 72/171 (42%), Positives = 113/171 (66%), Gaps = 6/171 (3%)
 Frame = +2

Query: 77  FCYVCGRSNHLAPQCFYRKKEPAKPAQ--KGNGTPKVNMIEGNPNSF----RLASSLPLV 238
           FC+VCGR+NH A  CF+R+++P       K +  P+ N+I  N +S     R   + P +
Sbjct: 150 FCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQANVITANASSDSPSNRYHVTSPEL 209

Query: 239 NSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSG 418
           N + +S DWW+DSGAN+HVC D+  FS+YQE    ++S+ + S  +++G G +EL ++SG
Sbjct: 210 NFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGRVELELSSG 269

Query: 419 KALNLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
             L L  V HV  +R+NLIS +LL++ GF++V ESN+ VI+++  F+GKG+
Sbjct: 270 NCLVLDEVFHVSEIRKNLISAALLVQQGFKVVFESNRVVISRHGSFVGKGY 320


>gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 489

 Score =  149 bits (375), Expect = 4e-39
 Identities = 71/171 (41%), Positives = 112/171 (65%), Gaps = 6/171 (3%)
 Frame = +2

Query: 77  FCYVCGRSNHLAPQCFYRKKEPAKPAQ--KGNGTPKVNMIEGNPNSF----RLASSLPLV 238
           FC+VCGR+NH A  CF+R+++P       K +  P+ N+I  N +S     R   + P +
Sbjct: 150 FCFVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQDNVITANASSDSPSNRYHVTSPEL 209

Query: 239 NSVTSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSG 418
           N + +S DWW+DSGAN+HVC D+  FS+YQE    ++S+ + S  +++G G +EL ++S 
Sbjct: 210 NFIYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGRVELELSSR 269

Query: 419 KALNLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
             L L  V HV  +R+NLIS +LL++ GF++V ESN+ VI+++  F+GKG+
Sbjct: 270 NCLVLDEVFHVSEIRKNLISVALLVQQGFKVVFESNRVVISQHGFFVGKGY 320


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  150 bits (379), Expect = 2e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCSQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  150 bits (379), Expect = 2e-38
 Identities = 76/168 (45%), Positives = 106/168 (63%)
 Frame = +2

Query: 68   DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
            D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 652  DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 708

Query: 248  TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
              ST+WW+D+GANIHVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 709  NQSTNWWIDTGANIHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 768

Query: 428  NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
             L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 769  QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 816


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1151

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 109 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 165

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 166 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 225

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 226 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 273


>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|AAX95834.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA93156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1277

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 199 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPAVFSV 255

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 256 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 315

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 316 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 363


>gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1302

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
 emb|CAD41412.2| OSJNBb0078D11.12 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 1320

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score =  149 bits (377), Expect = 3e-38
 Identities = 75/168 (44%), Positives = 106/168 (63%)
 Frame = +2

Query: 68  DGKFCYVCGRSNHLAPQCFYRKKEPAKPAQKGNGTPKVNMIEGNPNSFRLASSLPLVNSV 247
           D + C+VCG+  HLA +C  RK      A  G  +   N+  GN        +LP V SV
Sbjct: 238 DERTCFVCGQVGHLARKCPQRK---GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 294

Query: 248 TSSTDWWLDSGANIHVCNDRSWFSTYQESRGGSISLADDSTKQIMGSGSIELNMTSGKAL 427
             ST+WW+D+GAN+HVC D S FS+YQ +RG ++ + + S   + G G+++L  TSGK +
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIV 354

Query: 428 NLRGVLHVPSLRRNLISESLLLRAGFRIVKESNKFVITKNNVFIGKGF 571
            L+ V HVPS+ RNL+S S L R GF++V ESNK V++K+  FIGKG+
Sbjct: 355 QLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGY 402