BLASTX nr result
ID: Ophiopogon22_contig00020303
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00020303
(511 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020257911.1| pentatricopeptide repeat-containing protein ... 77 3e-14
ref|XP_008803620.1| PREDICTED: pentatricopeptide repeat-containi... 64 7e-09
ref|XP_010940322.1| PREDICTED: pentatricopeptide repeat-containi... 64 9e-09
ref|XP_020112944.1| pentatricopeptide repeat-containing protein ... 62 2e-08
gb|PKA65183.1| Pentatricopeptide repeat-containing protein [Apos... 62 3e-08
gb|OAY75201.1| Pentatricopeptide repeat-containing protein, mito... 62 3e-08
ref|XP_009401166.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_010935506.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_020590437.1| pentatricopeptide repeat-containing protein ... 57 3e-06
gb|PKU79412.1| Pentatricopeptide repeat-containing protein [Dend... 56 4e-06
ref|XP_020686427.1| pentatricopeptide repeat-containing protein ... 56 4e-06
ref|XP_020686426.1| pentatricopeptide repeat-containing protein ... 56 4e-06
ref|XP_020686425.1| pentatricopeptide repeat-containing protein ... 56 4e-06
>ref|XP_020257911.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Asparagus officinalis]
ref|XP_020257912.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Asparagus officinalis]
ref|XP_020257913.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Asparagus officinalis]
gb|ONK76135.1| uncharacterized protein A4U43_C03F24310 [Asparagus officinalis]
Length = 178
Score = 76.6 bits (187), Expect = 3e-14
Identities = 39/53 (73%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDK-DGDEGEEQASAA 356
LVK +R+R AKRVVTGLRKKF KDFVGGWLELEK+VGLDK DG E +E+ A
Sbjct: 126 LVKEKRVRAAKRVVTGLRKKFEKDFVGGWLELEKIVGLDKNDGGEEDEKVVEA 178
>ref|XP_008803620.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Phoenix dactylifera]
Length = 386
Score = 64.3 bits (155), Expect = 7e-09
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQASAA 356
L+K ++R AKRVV+GL+KKF +DF G W +LEKVVG++ DG EG EQA AA
Sbjct: 336 LMKNSKVRAAKRVVSGLKKKFPEDFTGDWKKLEKVVGVNVDG-EGSEQAVAA 386
>ref|XP_010940322.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Elaeis guineensis]
Length = 388
Score = 63.9 bits (154), Expect = 9e-09
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQASAA 356
L+K ++R AKRVV+GL+KKF DF G W +LEKVVG+D DGD G EQA A
Sbjct: 338 LMKKSKVRAAKRVVSGLKKKFPADFTGDWRKLEKVVGVDVDGD-GAEQAGVA 388
>ref|XP_020112944.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Ananas comosus]
Length = 301
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQAS 362
L++ ++R AKR VTGLRKKF +DF G W LEKVVGL KDG G + A+
Sbjct: 244 LMRAGKVRAAKRAVTGLRKKFPEDFTGEWKSLEKVVGLSKDGGGGSDPAA 293
>gb|PKA65183.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 380
Score = 62.4 bits (150), Expect = 3e-08
Identities = 33/52 (63%), Positives = 37/52 (71%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQASAA 356
L+KG R R AKRVVTGLRKKF K+FVG W LEK+VGL D +E QA A
Sbjct: 330 LMKGSRKRDAKRVVTGLRKKFPKEFVGSWKRLEKMVGLSSD-EEAPLQAEVA 380
>gb|OAY75201.1| Pentatricopeptide repeat-containing protein, mitochondrial [Ananas
comosus]
Length = 387
Score = 62.4 bits (150), Expect = 3e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQAS 362
L++ ++R AKR VTGLRKKF +DF G W LEKVVGL KDG G + A+
Sbjct: 330 LMRAGKVRAAKRAVTGLRKKFPEDFTGEWKSLEKVVGLSKDGGGGSDPAA 379
>ref|XP_009401166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Musa acuminata subsp. malaccensis]
Length = 382
Score = 58.5 bits (140), Expect = 7e-07
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQASAA 356
LVK ++R AKRVV GL+KKF +DFVG W +LEKVVGL D +EG + A
Sbjct: 332 LVKASKLRDAKRVVGGLKKKFPEDFVGEWKKLEKVVGLSAD-EEGSDNTMTA 382
>ref|XP_010935506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Elaeis guineensis]
Length = 386
Score = 58.5 bits (140), Expect = 7e-07
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKDGDEGEEQASAA 356
L+K ++R AKRV++GL+KKF K F G W +LEKVVG++ +G EG EQ AA
Sbjct: 336 LMKNSKVRAAKRVISGLKKKFPKYFTGDWKKLEKVVGVNVNG-EGSEQVVAA 386
>ref|XP_020590437.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Phalaenopsis equestris]
Length = 370
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKD 389
L+K ++R AKRVVTGLRKKF +DF G W +LE VVGL D
Sbjct: 322 LMKASKIRAAKRVVTGLRKKFPEDFSGSWKKLENVVGLSND 362
>gb|PKU79412.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 373
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKD 389
L+K ++R AKRVVTGLRKKF ++F G W++LE VVGL D
Sbjct: 325 LMKDSKIRAAKRVVTGLRKKFPEEFSGSWMKLENVVGLSND 365
>ref|XP_020686427.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like isoform X3 [Dendrobium catenatum]
Length = 377
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKD 389
L+K ++R AKRVVTGLRKKF ++F G W++LE VVGL D
Sbjct: 325 LMKDSKIRAAKRVVTGLRKKFPEEFSGSWMKLENVVGLSND 365
>ref|XP_020686426.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like isoform X2 [Dendrobium catenatum]
Length = 403
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKD 389
L+K ++R AKRVVTGLRKKF ++F G W++LE VVGL D
Sbjct: 325 LMKDSKIRAAKRVVTGLRKKFPEEFSGSWMKLENVVGLSND 365
>ref|XP_020686425.1| pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like isoform X1 [Dendrobium catenatum]
Length = 409
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -1
Query: 511 LVKGERMRVAKRVVTGLRKKFSKDFVGGWLELEKVVGLDKD 389
L+K ++R AKRVVTGLRKKF ++F G W++LE VVGL D
Sbjct: 325 LMKDSKIRAAKRVVTGLRKKFPEEFSGSWMKLENVVGLSND 365