BLASTX nr result

ID: Ophiopogon22_contig00020168 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00020168
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259980.1| uncharacterized protein LOC109836484 isoform...    76   5e-13
ref|XP_020259977.1| E3 ubiquitin-protein ligase RNF6 isoform X1 ...    76   5e-13
ref|XP_020259981.1| uncharacterized protein LOC109836484 isoform...    65   4e-09
ref|XP_020259979.1| E3 ubiquitin-protein ligase RNF6 isoform X2 ...    64   6e-09

>ref|XP_020259980.1| uncharacterized protein LOC109836484 isoform X3 [Asparagus
           officinalis]
 gb|ONK70930.1| uncharacterized protein A4U43_C04F2980 [Asparagus officinalis]
          Length = 725

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 51/105 (48%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
 Frame = -3

Query: 476 IDASLAWFLQEKDGHNASXXXXXXXXXRDLSSSSIQSRFRQNLQNPGRGANHARVPTSIR 297
           IDAS+A  LQE DGH+AS         RDL SSS++SR     QN GR    +RVPTS R
Sbjct: 538 IDASIALLLQENDGHSASISRQNRARRRDLPSSSLRSRL---WQNSGRETFRSRVPTSSR 594

Query: 296 QAQVRR-------DVRRLXXXXXXXXXXXXARVNNILHIQRDFNE 183
            AQ+RR       D+ R             ARVNNILH+QRDFNE
Sbjct: 595 LAQMRRELHMTMMDLNRRFDIIGTASFGDAARVNNILHMQRDFNE 639


>ref|XP_020259977.1| E3 ubiquitin-protein ligase RNF6 isoform X1 [Asparagus officinalis]
 ref|XP_020259978.1| E3 ubiquitin-protein ligase RNF6 isoform X1 [Asparagus officinalis]
          Length = 741

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 51/105 (48%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
 Frame = -3

Query: 476 IDASLAWFLQEKDGHNASXXXXXXXXXRDLSSSSIQSRFRQNLQNPGRGANHARVPTSIR 297
           IDAS+A  LQE DGH+AS         RDL SSS++SR     QN GR    +RVPTS R
Sbjct: 554 IDASIALLLQENDGHSASISRQNRARRRDLPSSSLRSRL---WQNSGRETFRSRVPTSSR 610

Query: 296 QAQVRR-------DVRRLXXXXXXXXXXXXARVNNILHIQRDFNE 183
            AQ+RR       D+ R             ARVNNILH+QRDFNE
Sbjct: 611 LAQMRRELHMTMMDLNRRFDIIGTASFGDAARVNNILHMQRDFNE 655


>ref|XP_020259981.1| uncharacterized protein LOC109836484 isoform X4 [Asparagus
           officinalis]
          Length = 715

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
 Frame = -3

Query: 449 QEKDGHNASXXXXXXXXXRDLSSSSIQSRFRQNLQNPGRGANHARVPTSIRQAQVRR--- 279
           +E DGH+AS         RDL SSS++SR     QN GR    +RVPTS R AQ+RR   
Sbjct: 537 EENDGHSASISRQNRARRRDLPSSSLRSRL---WQNSGRETFRSRVPTSSRLAQMRRELH 593

Query: 278 ----DVRRLXXXXXXXXXXXXARVNNILHIQRDFNE 183
               D+ R             ARVNNILH+QRDFNE
Sbjct: 594 MTMMDLNRRFDIIGTASFGDAARVNNILHMQRDFNE 629


>ref|XP_020259979.1| E3 ubiquitin-protein ligase RNF6 isoform X2 [Asparagus officinalis]
          Length = 731

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
 Frame = -3

Query: 449 QEKDGHNASXXXXXXXXXRDLSSSSIQSRFRQNLQNPGRGANHARVPTSIRQAQVRR--- 279
           +E DGH+AS         RDL SSS++SR     QN GR    +RVPTS R AQ+RR   
Sbjct: 553 RENDGHSASISRQNRARRRDLPSSSLRSRL---WQNSGRETFRSRVPTSSRLAQMRRELH 609

Query: 278 ----DVRRLXXXXXXXXXXXXARVNNILHIQRDFNE 183
               D+ R             ARVNNILH+QRDFNE
Sbjct: 610 MTMMDLNRRFDIIGTASFGDAARVNNILHMQRDFNE 645


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