BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00020082
         (357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241481.1| protein Rf1, mitochondrial-like isoform X1 [...    79   7e-21
ref|XP_008806535.1| PREDICTED: protein Rf1, mitochondrial-like [...    80   5e-20
ref|XP_008802945.1| PREDICTED: protein Rf1, mitochondrial-like [...    72   3e-19
ref|XP_020257989.1| protein Rf1, mitochondrial-like [Asparagus o...    79   4e-19
gb|ONK76255.1| uncharacterized protein A4U43_C03F25650 [Asparagu...    79   4e-19
ref|XP_007035007.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-18
ref|XP_008802946.1| PREDICTED: protein Rf1, mitochondrial-like [...    63   1e-17
ref|XP_010935652.1| PREDICTED: protein Rf1, mitochondrial-like [...    69   2e-17
ref|XP_008802326.1| PREDICTED: protein Rf1, mitochondrial-like [...    64   2e-17
ref|XP_021291759.1| pentatricopeptide repeat-containing protein ...    76   2e-17
ref|XP_010933042.1| PREDICTED: protein Rf1, mitochondrial-like [...    64   2e-17
ref|XP_020692405.1| pentatricopeptide repeat-containing protein ...    73   3e-17
ref|XP_019709165.1| PREDICTED: protein Rf1, mitochondrial-like [...    66   5e-17
gb|OVA07561.1| Pentatricopeptide repeat [Macleaya cordata]             67   2e-16
gb|OEL35303.1| Protein Rf1, mitochondrial [Dichanthelium oligosa...    66   4e-16
ref|XP_004986451.2| protein Rf1, mitochondrial [Setaria italica]       68   4e-15
ref|XP_020573669.1| pentatricopeptide repeat-containing protein ...    71   4e-15
pdb|5I9G|C Chain C, Crystal Structure Of Designed Pentatricopept...    62   4e-15
pdb|5I9D|A Chain A, Crystal Structure Of Designed Pentatricopept...    61   6e-15
pdb|5I9H|A Chain A, Crystal Structure Of Designed Pentatricopept...    61   7e-15

>ref|XP_020241481.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241482.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241483.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241484.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241485.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241486.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241487.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241488.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241489.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
          Length = 846

 Score = 79.0 bits (193), Expect(2) = 7e-21
 Identities = 38/74 (51%), Positives = 52/74 (70%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           + T+R +L GLCKN CIDEA+DLFQ +  Q++  D+E FNI++  GM R G+T   K LF
Sbjct: 678 ISTYRVILNGLCKNKCIDEAIDLFQRMVSQKYTIDVEAFNIMI-SGMFRVGRTQAAKDLF 736

Query: 314 EAIFAKGLVPDVVT 355
             + +K LVP+VVT
Sbjct: 737 SDMLSKKLVPNVVT 750



 Score = 49.3 bits (116), Expect(2) = 7e-21
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           KGLK T + Y+T+L+GLYQA RV  A+KMH +MI   V  DI
Sbjct: 637 KGLKQTNVIYHTMLTGLYQAGRVSDARKMHDKMIRDKVARDI 678


>ref|XP_008806535.1| PREDICTED: protein Rf1, mitochondrial-like [Phoenix dactylifera]
          Length = 673

 Score = 80.1 bits (196), Expect(2) = 5e-20
 Identities = 43/74 (58%), Positives = 53/74 (71%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           L T   MLGGLCKN  IDEAMD+FQ +S Q +  ++  FNIL+D GMLRAGK    + LF
Sbjct: 486 LSTCHIMLGGLCKNRYIDEAMDVFQYISSQNYKLEVTTFNILID-GMLRAGKFKGARDLF 544

Query: 314 EAIFAKGLVPDVVT 355
            AI +KGL+P+VVT
Sbjct: 545 NAITSKGLMPNVVT 558



 Score = 45.1 bits (105), Expect(2) = 5e-20
 Identities = 21/41 (51%), Positives = 31/41 (75%)
 Frame = +1

Query: 10  GLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           GL+ TTITYNT+++ L++  RV  AK++  +MI AGV PD+
Sbjct: 446 GLRPTTITYNTIINALFRVGRVGDAKELLGKMIAAGVCPDL 486


>ref|XP_008802945.1| PREDICTED: protein Rf1, mitochondrial-like [Phoenix dactylifera]
          Length = 771

 Score = 71.6 bits (174), Expect(2) = 3e-19
 Identities = 38/83 (45%), Positives = 51/83 (61%)
 Frame = +2

Query: 107 LMLGYLPISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAG 286
           L  G  P  L T+  +L GLCKN CIDEAM LFQ         D+ CFN L+D G+++AG
Sbjct: 591 LAAGICP-DLRTYNMILDGLCKNQCIDEAMKLFQDTLSSNVNLDVVCFNTLID-GLVKAG 648

Query: 287 KTVEVKHLFEAIFAKGLVPDVVT 355
           +    K++F+ I AK L P+V+T
Sbjct: 649 RFEAAKNIFDTIHAKDLKPNVIT 671



 Score = 50.8 bits (120), Expect(2) = 3e-19
 Identities = 22/43 (51%), Positives = 33/43 (76%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           HKG++ T ITYNT+L+GLY+  RV  A+K+  +M+ AG+ PD+
Sbjct: 557 HKGVQPTVITYNTVLTGLYRVGRVADAEKLRDKMLAAGICPDL 599



 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+  ++ G  KN  +DEAMDLF+ +  +   PDI  ++ ++D G+   GK  +V+ L + 
Sbjct: 356 TYSVLINGFVKNQKMDEAMDLFEKMQREGVKPDIVTYSTILD-GLCHLGKMEDVRGLLDE 414

Query: 320 IFAKGLVPDVVT 355
           + ++G+ PDVVT
Sbjct: 415 MMSRGIHPDVVT 426


>ref|XP_020257989.1| protein Rf1, mitochondrial-like [Asparagus officinalis]
          Length = 781

 Score = 79.3 bits (194), Expect(2) = 4e-19
 Identities = 38/76 (50%), Positives = 52/76 (68%)
 Frame = +2

Query: 128 ISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKH 307
           ++  T+  +L GLCKN CIDEAM+LFQS+  Q++  D+E FNI++  GM RAG+T   K 
Sbjct: 589 LNSSTYHIILDGLCKNRCIDEAMNLFQSMLTQKYTTDVEAFNIMI-SGMFRAGRTKAAKD 647

Query: 308 LFEAIFAKGLVPDVVT 355
            F  +  K LVPD+VT
Sbjct: 648 FFSDMLVKELVPDIVT 663



 Score = 42.7 bits (99), Expect(2) = 4e-19
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMI 108
           +K LK T +TYNT+L+GLY+  RV  A+KM  +MI
Sbjct: 549 NKELKQTNVTYNTMLTGLYRVGRVSDARKMRDKMI 583


>gb|ONK76255.1| uncharacterized protein A4U43_C03F25650 [Asparagus officinalis]
          Length = 778

 Score = 79.3 bits (194), Expect(2) = 4e-19
 Identities = 38/76 (50%), Positives = 52/76 (68%)
 Frame = +2

Query: 128 ISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKH 307
           ++  T+  +L GLCKN CIDEAM+LFQS+  Q++  D+E FNI++  GM RAG+T   K 
Sbjct: 589 LNSSTYHIILDGLCKNRCIDEAMNLFQSMLTQKYTTDVEAFNIMI-SGMFRAGRTKAAKD 647

Query: 308 LFEAIFAKGLVPDVVT 355
            F  +  K LVPD+VT
Sbjct: 648 FFSDMLVKELVPDIVT 663



 Score = 42.7 bits (99), Expect(2) = 4e-19
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMI 108
           +K LK T +TYNT+L+GLY+  RV  A+KM  +MI
Sbjct: 549 NKELKQTNVTYNTMLTGLYRVGRVSDARKMRDKMI 583


>ref|XP_007035007.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial [Theobroma cacao]
 gb|EOY05933.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 609

 Score = 76.6 bits (187), Expect(2) = 3e-18
 Identities = 43/80 (53%), Positives = 53/80 (66%)
 Frame = +2

Query: 116 GYLPISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTV 295
           G  PI L T+  ML GLCKN  I+EAMDLF SL    + P +E F+IL+D GM +AG+  
Sbjct: 435 GQFPI-LSTYTVMLDGLCKNGHIEEAMDLFHSLESTEYKPGVEFFSILID-GMCKAGRLE 492

Query: 296 EVKHLFEAIFAKGLVPDVVT 355
           E + +F  I  KGLVPDVVT
Sbjct: 493 EARKMFIEISEKGLVPDVVT 512



 Score = 42.7 bits (99), Expect(2) = 3e-18
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRM 105
           KG+K TT+TYNTL+  L QA+RV  A+KM   M
Sbjct: 399 KGIKPTTVTYNTLIGALCQARRVSTAQKMFNEM 431


>ref|XP_008802946.1| PREDICTED: protein Rf1, mitochondrial-like [Phoenix dactylifera]
          Length = 775

 Score = 62.8 bits (151), Expect(2) = 1e-17
 Identities = 36/83 (43%), Positives = 47/83 (56%)
 Frame = +2

Query: 107 LMLGYLPISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAG 286
           L  G  P +L T+  +L GLCKN  IDEAM LFQ         DI CFN ++D G+++A 
Sbjct: 595 LAAGICP-NLRTYNIILDGLCKNQYIDEAMKLFQDALSSNVNLDIVCFNSMID-GLVKAE 652

Query: 287 KTVEVKHLFEAIFAKGLVPDVVT 355
           +    K +F  I  K L PDV+T
Sbjct: 653 RFKAAKDIFNTIHVKDLKPDVIT 675



 Score = 54.3 bits (129), Expect(2) = 1e-17
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           HKG++HT ITYNT+L+GLY+  RV  A+ +H +M+ AG+ P++
Sbjct: 561 HKGVQHTVITYNTMLAGLYRVGRVADAENLHDKMLAAGICPNL 603


>ref|XP_010935652.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
          Length = 796

 Score = 68.6 bits (166), Expect(2) = 2e-17
 Identities = 38/75 (50%), Positives = 48/75 (64%)
 Frame = +2

Query: 131 SLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHL 310
           +L T+ T+L  LCKN CIDEAM LFQ         +I+ F+IL+D G+ +AGK    K+L
Sbjct: 623 NLRTYNTILYELCKNQCIDEAMKLFQDTLSSTVSLNIDSFSILID-GLFKAGKVEAAKNL 681

Query: 311 FEAIFAKGLVPDVVT 355
           F AI  K L PDVVT
Sbjct: 682 FNAIPTKDLKPDVVT 696



 Score = 48.1 bits (113), Expect(2) = 2e-17
 Identities = 20/41 (48%), Positives = 33/41 (80%)
 Frame = +1

Query: 10  GLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           G++HTT+ YNT+L+G+Y+A RV  A+K+  +M+ AGV P++
Sbjct: 584 GVQHTTVVYNTILAGMYRAGRVADAEKLFDKMLAAGVWPNL 624



 Score = 54.3 bits (129), Expect(2) = 5e-09
 Identities = 26/72 (36%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ G  KN  +DEA++LF  +  Q   PD+  ++IL+D G+   G+  +V+ L + 
Sbjct: 381 TYSTLINGFIKNQKMDEAVELFNQMQQQGVKPDVVTYSILLD-GLCHLGRVQDVRCLLDE 439

Query: 320 IFAKGLVPDVVT 355
           + + G+ PDVVT
Sbjct: 440 MASHGIHPDVVT 451



 Score = 33.9 bits (76), Expect(2) = 5e-09
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPD 129
           KG K   I+YNTL+ G  Q  R+  A+K+   M D G+ P+
Sbjct: 338 KGEKPDIISYNTLMQGYCQESRLVDARKVFDSMSDKGLAPN 378


>ref|XP_008802326.1| PREDICTED: protein Rf1, mitochondrial-like [Phoenix dactylifera]
          Length = 765

 Score = 63.9 bits (154), Expect(2) = 2e-17
 Identities = 37/74 (50%), Positives = 44/74 (59%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           L T+  +L  LCKN  IDEAM LFQ         DI CFN L+D G+ +AGK    K+LF
Sbjct: 593 LYTYNIILDALCKNQRIDEAMKLFQDTLSFNVNLDIVCFNTLID-GLFKAGKVEAAKNLF 651

Query: 314 EAIFAKGLVPDVVT 355
            AI  K L P+VVT
Sbjct: 652 NAIPTKDLKPNVVT 665



 Score = 52.8 bits (125), Expect(2) = 2e-17
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           HKG++HTTI  NT+L+G+Y+ +RV  A+K+  +M+ AGV PD+
Sbjct: 551 HKGVQHTTIVCNTILAGMYRVRRVADAEKLFEKMLAAGVRPDL 593


>ref|XP_021291759.1| pentatricopeptide repeat-containing protein At1g63330-like
           [Herrania umbratica]
          Length = 644

 Score = 75.9 bits (185), Expect(2) = 2e-17
 Identities = 42/80 (52%), Positives = 52/80 (65%)
 Frame = +2

Query: 116 GYLPISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTV 295
           G  PI L T+  ML GLCKN  I+EAMDLF SL    + P +E F+I++D GM + GK  
Sbjct: 470 GQFPI-LSTYTVMLDGLCKNGHIEEAMDLFHSLESTEYKPGVELFSIVID-GMCKVGKLK 527

Query: 296 EVKHLFEAIFAKGLVPDVVT 355
           E + +F  I  KGLVPDVVT
Sbjct: 528 EARKMFVEISEKGLVPDVVT 547



 Score = 40.8 bits (94), Expect(2) = 2e-17
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRM 105
           KG+K TT+TYNTL+  L QA+++  A+KM   M
Sbjct: 434 KGIKPTTVTYNTLIGALCQARQISTAQKMFNEM 466


>ref|XP_010933042.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
          Length = 769

 Score = 63.5 bits (153), Expect(2) = 2e-17
 Identities = 38/83 (45%), Positives = 47/83 (56%)
 Frame = +2

Query: 107 LMLGYLPISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAG 286
           L  G  P SL T+  +L GL KN  IDEAM LFQ         DI CFNI++D G+++AG
Sbjct: 589 LAAGICP-SLHTYSIILDGLGKNQYIDEAMKLFQGALSSNVNLDIVCFNIMID-GLVKAG 646

Query: 287 KTVEVKHLFEAIFAKGLVPDVVT 355
                K +F  I  K L PDV+T
Sbjct: 647 MFKAAKDIFNTIHTKDLKPDVIT 669



 Score = 52.8 bits (125), Expect(2) = 2e-17
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           HKG++HT ITYNT+L+GLY   RV  A+K+  +M+ AG+ P +
Sbjct: 555 HKGVQHTVITYNTMLAGLYHVGRVADAEKLRNKMLAAGICPSL 597


>ref|XP_020692405.1| pentatricopeptide repeat-containing protein At1g63330-like
           [Dendrobium catenatum]
 ref|XP_020692406.1| pentatricopeptide repeat-containing protein At1g63330-like
           [Dendrobium catenatum]
 ref|XP_020692407.1| pentatricopeptide repeat-containing protein At1g63330-like
           [Dendrobium catenatum]
 ref|XP_020692408.1| pentatricopeptide repeat-containing protein At1g63330-like
           [Dendrobium catenatum]
 ref|XP_020692409.1| pentatricopeptide repeat-containing protein At1g63330-like
           [Dendrobium catenatum]
 gb|PKU67666.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 648

 Score = 72.8 bits (177), Expect(2) = 3e-17
 Identities = 33/71 (46%), Positives = 50/71 (70%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           ++T+  ++ GLCKN C+DEAMD+FQ +  Q F  +++ FN +MD G+ +AGK   V+ LF
Sbjct: 450 IETYHAIIRGLCKNHCVDEAMDIFQVMQSQNFKAEVKTFNFMMD-GLYKAGKYKLVRDLF 508

Query: 314 EAIFAKGLVPD 346
           + + AKGL PD
Sbjct: 509 DGLPAKGLSPD 519



 Score = 43.1 bits (100), Expect(2) = 3e-17
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           KG +HT    N +L+ LY+  RV  AK+ H +M+ AGV PDI
Sbjct: 409 KGFEHTATICNVVLTELYRVGRVADAKRTHEKMVAAGVTPDI 450


>ref|XP_019709165.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
          Length = 716

 Score = 66.2 bits (160), Expect(2) = 5e-17
 Identities = 37/83 (44%), Positives = 48/83 (57%)
 Frame = +2

Query: 107 LMLGYLPISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAG 286
           L  G  P SL T+  +L GLCKN  IDEAM LFQ +       DI CFN ++D G ++AG
Sbjct: 590 LAAGICP-SLHTYNIILDGLCKNQYIDEAMKLFQGVLSSNVNLDIVCFNTMID-GFIKAG 647

Query: 287 KTVEVKHLFEAIFAKGLVPDVVT 355
           +    K++F  I  K L PD +T
Sbjct: 648 RFKAAKNIFNTIPTKDLKPDAIT 670



 Score = 48.9 bits (115), Expect(2) = 5e-17
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           HKG+KHT I YN +L+GLY+  RV  A+K+  +M+ AG+ P +
Sbjct: 556 HKGVKHTVIIYNAMLAGLYRVGRVAEAEKLCGKMLAAGICPSL 598


>gb|OVA07561.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 520

 Score = 67.4 bits (163), Expect(2) = 2e-16
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           L T+ TML GLCKN  IDEA++LF S+    F   I  F+IL+D G+ + GK    + LF
Sbjct: 353 LVTYTTMLDGLCKNHRIDEAIELFHSMEGNGFEAHIYIFSILID-GLWKVGKVENARKLF 411

Query: 314 EAIFAKGLVPDVVT 355
             I  KGLVPDVVT
Sbjct: 412 REISNKGLVPDVVT 425



 Score = 45.8 bits (107), Expect(2) = 2e-16
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           HKGLK T ++YNTL+ GL+ A RV  A+ +   M   G  PD++ +
Sbjct: 311 HKGLKPTEVSYNTLIGGLFHAGRVRTAQSLFKDMQSCGQSPDLVTY 356



 Score = 47.4 bits (111), Expect(2) = 6e-07
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = +2

Query: 143 HRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEAI 322
           +  ++ G CKN  +DEAM LF+ +  +   P    +N L+ GG+  AG+    + LF+ +
Sbjct: 286 YNALINGYCKNCRLDEAMQLFKKMKHKGLKPTEVSYNTLI-GGLFHAGRVRTAQSLFKDM 344

Query: 323 FAKGLVPDVVT 355
            + G  PD+VT
Sbjct: 345 QSCGQSPDLVT 355



 Score = 33.5 bits (75), Expect(2) = 6e-07
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 10  GLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPD 129
           G K T + YN ++ G     R++ A K+   M+D G+ PD
Sbjct: 243 GNKPTVLAYNVMIGGFCLTGRLEEAAKLFDSMVDRGLEPD 282



 Score = 43.5 bits (101), Expect(2) = 8e-07
 Identities = 23/72 (31%), Positives = 43/72 (59%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ +++ GLCK+  + EAM LF  +S Q   P +  ++ L+ G    +G+  E   LF+ 
Sbjct: 154 TYNSIIHGLCKSGRLSEAMRLFGQMSSQGTSPSVVTYSSLIHGHG-NSGQLSEAIGLFDQ 212

Query: 320 IFAKGLVPDVVT 355
           + ++G+ P+V+T
Sbjct: 213 MSSRGISPNVIT 224



 Score = 37.0 bits (84), Expect(2) = 8e-07
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +1

Query: 10  GLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDII 135
           G+   TIT NTL+SGL +  +VD+A ++  +M+     PD++
Sbjct: 76  GIHPNTITCNTLISGLCRIGKVDLALELQKKMVKWNCKPDVV 117


>gb|OEL35303.1| Protein Rf1, mitochondrial [Dichanthelium oligosanthes]
          Length = 264

 Score = 66.2 bits (160), Expect(2) = 4e-16
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           + T+  +  GLC+N C+DEA+ +FQSL  + F  ++  FNI++   +L+ G+  E K LF
Sbjct: 89  MSTYNIVRKGLCENRCVDEALRMFQSLCSKEFQLEVRTFNIMI-SALLKVGRLGEAKGLF 147

Query: 314 EAIFAKGLVPDVVT 355
            AI   GLVPDVV+
Sbjct: 148 SAISCNGLVPDVVS 161



 Score = 45.8 bits (107), Expect(2) = 4e-16
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +1

Query: 4   HKGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGV 120
           +K +K   ITYNT+L GL+QA R+  AKK++ RM+ +G+
Sbjct: 47  YKDVKPDAITYNTMLQGLFQAGRIAAAKKLYIRMVGSGI 85


>ref|XP_004986451.2| protein Rf1, mitochondrial [Setaria italica]
          Length = 796

 Score = 67.8 bits (164), Expect(2) = 4e-15
 Identities = 35/76 (46%), Positives = 51/76 (67%)
 Frame = +2

Query: 128 ISLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKH 307
           + +DT+R +LGGLC N CIDEAM +FQ L  +    D+  FNI++   +L+ G+  E K 
Sbjct: 620 LKMDTYRIVLGGLCHNRCIDEAMRMFQILCPKEL--DVSIFNIMI-RALLKVGRIDEAKG 676

Query: 308 LFEAIFAKGLVPDVVT 355
           LF AI + GLVP++V+
Sbjct: 677 LFSAISSNGLVPNIVS 692



 Score = 40.8 bits (94), Expect(2) = 4e-15
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAG 117
           K +K  +ITYN +L GL+QA R   A++++ RM+++G
Sbjct: 581 KDIKPNSITYNIILQGLFQAGRTSAARELYDRMVESG 617


>ref|XP_020573669.1| pentatricopeptide repeat-containing protein At1g63400-like
           [Phalaenopsis equestris]
 ref|XP_020573670.1| pentatricopeptide repeat-containing protein At1g63400-like
           [Phalaenopsis equestris]
 ref|XP_020573671.1| pentatricopeptide repeat-containing protein At1g63400-like
           [Phalaenopsis equestris]
 ref|XP_020573672.1| pentatricopeptide repeat-containing protein At1g63400-like
           [Phalaenopsis equestris]
          Length = 691

 Score = 71.2 bits (173), Expect(2) = 4e-15
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = +2

Query: 134 LDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLF 313
           +DT+  ++ GLCKN C DEAMD+FQS+  Q     ++ FN +MD G+ +AG+   VK LF
Sbjct: 493 IDTYHAIIRGLCKNNCFDEAMDVFQSMLSQNSEIAVKTFNFMMD-GLYKAGRFKLVKDLF 551

Query: 314 EAIFAKGLVPDVVT 355
           + + AKGL PD  T
Sbjct: 552 DGLSAKGLSPDAFT 565



 Score = 37.4 bits (85), Expect(2) = 4e-15
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDI 132
           +G + T    N +L+ LY+  RV  A++ H +M+ AGV PDI
Sbjct: 452 RGFEQTATICNAILNELYRVGRVADARRTHQKMMAAGVSPDI 493


>pdb|5I9G|C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score = 61.2 bits (147), Expect(2) = 4e-15
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 298 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 356

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 357 MVEKGIKPDVVT 368



 Score = 47.4 bits (111), Expect(2) = 4e-15
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K + +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 255 KGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 299



 Score = 61.2 bits (147), Expect(2) = 7e-15
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 181

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 182 MVEKGIKPDVVT 193



 Score = 46.6 bits (109), Expect(2) = 7e-15
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 80  KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 124



 Score = 62.0 bits (149), Expect(2) = 1e-14
 Identities = 32/75 (42%), Positives = 48/75 (64%)
 Frame = +2

Query: 131 SLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHL 310
           S+ T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   L
Sbjct: 260 SVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKL 318

Query: 311 FEAIFAKGLVPDVVT 355
           FE +  KG+ PDVVT
Sbjct: 319 FEEMVEKGIKPDVVT 333



 Score = 45.1 bits (105), Expect(2) = 1e-14
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K + +TYNTL+ GL +A ++D A K+   M++ G+ P ++ +
Sbjct: 220 KGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTY 264



 Score = 59.7 bits (143), Expect(2) = 2e-14
 Identities = 31/75 (41%), Positives = 47/75 (62%)
 Frame = +2

Query: 131 SLDTHRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHL 310
           S+ T+ T++ GLCK   +DEA+ LF+ +  +   P +  +N L+D G+ +AGK  E   L
Sbjct: 225 SVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLID-GLCKAGKLDEALKL 283

Query: 311 FEAIFAKGLVPDVVT 355
           FE +  KG+ PDVVT
Sbjct: 284 FEEMVEKGIKPDVVT 298



 Score = 46.6 bits (109), Expect(2) = 2e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194



 Score = 61.2 bits (147), Expect(2) = 3e-14
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 88  TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 146

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 147 MVEKGIKPDVVT 158



 Score = 44.7 bits (104), Expect(2) = 3e-14
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           +G+  T +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 89



 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 30/72 (41%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 216

Query: 320 IFAKGLVPDVVT 355
           +  KG+ P VVT
Sbjct: 217 MVEKGIKPSVVT 228



 Score = 46.6 bits (109), Expect(2) = 4e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 115 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 159



 Score = 57.8 bits (138), Expect(2) = 8e-14
 Identities = 29/72 (40%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 391

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PD +T
Sbjct: 392 MVEKGIKPDELT 403



 Score = 46.6 bits (109), Expect(2) = 8e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 290 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 334



 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 53  TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 111

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 112 MVEKGIKPDVVT 123



 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   P +  +N L+D G+ +AGK  E   LFE 
Sbjct: 193 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLID-GLCKAGKLDEALKLFEE 251

Query: 320 IFAKGLVPDVVT 355
           +  KG+ P VVT
Sbjct: 252 MVEKGIKPSVVT 263


>pdb|5I9D|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score = 61.2 bits (147), Expect(2) = 6e-15
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 298 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 356

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 357 MVEKGIKPDVVT 368



 Score = 47.0 bits (110), Expect(2) = 6e-15
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 255 KGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 299



 Score = 61.2 bits (147), Expect(2) = 7e-15
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 181

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 182 MVEKGIKPDVVT 193



 Score = 46.6 bits (109), Expect(2) = 7e-15
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 80  KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 124



 Score = 61.2 bits (147), Expect(2) = 3e-14
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 88  TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 146

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 147 MVEKGIKPDVVT 158



 Score = 44.7 bits (104), Expect(2) = 3e-14
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           +G+  T +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 89



 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 30/72 (41%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   P++  +N L+D G+ +AGK  E   LFE 
Sbjct: 228 TYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLID-GLCKAGKLDEALKLFEE 286

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 287 MVEKGIKPDVVT 298



 Score = 46.6 bits (109), Expect(2) = 4e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194



 Score = 61.2 bits (147), Expect(2) = 8e-14
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 263 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 321

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 322 MVEKGIKPDVVT 333



 Score = 57.8 bits (138), Expect(2) = 8e-14
 Identities = 29/72 (40%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 391

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PD +T
Sbjct: 392 MVEKGIKPDELT 403



 Score = 46.6 bits (109), Expect(2) = 8e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 290 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 334



 Score = 43.1 bits (100), Expect(2) = 8e-14
 Identities = 16/45 (35%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TY+TL+ GL +A ++D A K+   M++ G+ P+++ +
Sbjct: 220 KGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTY 264



 Score = 57.4 bits (137), Expect(2) = 1e-13
 Identities = 29/72 (40%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  ++ L+D G+ +AGK  E   LFE 
Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLID-GLCKAGKLDEALKLFEE 216

Query: 320 IFAKGLVPDVVT 355
           +  KG+ P+VVT
Sbjct: 217 MVEKGIKPNVVT 228



 Score = 46.6 bits (109), Expect(2) = 1e-13
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 115 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 159



 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 53  TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 111

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 112 MVEKGIKPDVVT 123



 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/72 (38%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   P++  ++ L+D G+ +AGK  E   LFE 
Sbjct: 193 TYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLID-GLCKAGKLDEALKLFEE 251

Query: 320 IFAKGLVPDVVT 355
           +  KG+ P+VVT
Sbjct: 252 MVEKGIKPNVVT 263


>pdb|5I9H|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
          Length = 460

 Score = 61.2 bits (147), Expect(2) = 7e-15
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 181

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 182 MVEKGIKPDVVT 193



 Score = 61.2 bits (147), Expect(2) = 7e-15
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 298 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 356

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 357 MVEKGIKPDVVT 368



 Score = 46.6 bits (109), Expect(2) = 7e-15
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 80  KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 124



 Score = 46.6 bits (109), Expect(2) = 7e-15
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 255 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 299



 Score = 60.8 bits (146), Expect(2) = 1e-14
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 228 TYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 286

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 287 MVEKGIKPDVVT 298



 Score = 46.6 bits (109), Expect(2) = 1e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194



 Score = 61.2 bits (147), Expect(2) = 3e-14
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 88  TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 146

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 147 MVEKGIKPDVVT 158



 Score = 44.7 bits (104), Expect(2) = 3e-14
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           +G+  T +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 89



 Score = 61.2 bits (147), Expect(2) = 4e-14
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 263 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 321

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 322 MVEKGIKPDVVT 333



 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 30/72 (41%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +  L+D G+ +AGK  E   LFE 
Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLID-GLCKAGKLDEALKLFEE 216

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 217 MVEKGIKPDVVT 228



 Score = 46.6 bits (109), Expect(2) = 4e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 115 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 159



 Score = 44.3 bits (103), Expect(2) = 4e-14
 Identities = 17/45 (37%), Positives = 30/45 (66%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TY TL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 185 KGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 229



 Score = 57.8 bits (138), Expect(2) = 8e-14
 Identities = 29/72 (40%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 391

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PD +T
Sbjct: 392 MVEKGIKPDELT 403



 Score = 46.6 bits (109), Expect(2) = 8e-14
 Identities = 18/45 (40%), Positives = 31/45 (68%)
 Frame = +1

Query: 7   KGLKHTTITYNTLLSGLYQAKRVDVAKKMHTRMIDAGVPPDIIRH 141
           KG+K   +TYNTL+ GL +A ++D A K+   M++ G+ PD++ +
Sbjct: 290 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 334



 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +N L+D G+ +AGK  E   LFE 
Sbjct: 53  TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID-GLCKAGKLDEALKLFEE 111

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 112 MVEKGIKPDVVT 123



 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 30/72 (41%), Positives = 45/72 (62%)
 Frame = +2

Query: 140 THRTMLGGLCKNMCIDEAMDLFQSLSFQRFGPDIECFNILMDGGMLRAGKTVEVKHLFEA 319
           T+ T++ GLCK   +DEA+ LF+ +  +   PD+  +  L+D G+ +AGK  E   LFE 
Sbjct: 193 TYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLID-GLCKAGKLDEALKLFEE 251

Query: 320 IFAKGLVPDVVT 355
           +  KG+ PDVVT
Sbjct: 252 MVEKGIKPDVVT 263