BLASTX nr result
ID: Ophiopogon22_contig00019088
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00019088
(1168 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP17738.1| unnamed protein product [Coffea canephora] 357 e-113
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 361 e-112
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 353 e-111
emb|CDP17739.1| unnamed protein product [Coffea canephora] 309 1e-98
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 304 5e-92
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 310 3e-91
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 310 3e-91
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 299 6e-89
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 299 2e-87
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 299 2e-87
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 296 5e-87
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 294 3e-86
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 290 3e-86
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 290 3e-86
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 293 4e-86
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 293 2e-85
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 291 2e-85
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 292 2e-85
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 292 3e-85
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 291 8e-85
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 357 bits (916), Expect = e-113
Identities = 181/385 (47%), Positives = 257/385 (66%), Gaps = 4/385 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G+I+++ DG R L VRYVP++ R++IS+ LES+GL+V++ +++VT GAL+++K
Sbjct: 351 GSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKG 410
Query: 988 DRDSSSYFPRGSAXXXXXXXXXXXXXXXXXR---LWHLRLGHTSMGSLRALSRRGLIDSA 818
R ++ Y+ +GS LWH+RLG SL+ L+++GL+
Sbjct: 411 VRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGT 470
Query: 817 LSCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDD 638
C L CEHC + K+ VKFGT +H G LD VH DVWGP+K SLGG +FV+F+DD
Sbjct: 471 KVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDD 530
Query: 637 CSRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLRE 458
SR VWV TM KDE+L++F KW+ VENQTGRKIK+L+ DN G +Y DPFQ++C
Sbjct: 531 FSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGG--EYKSDPFQKICQEC 588
Query: 457 GIQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPS 278
GI RHF + + +GV++ MN+TL+E VRC++ +GL R FWA+A+ YA HL+NRLPS
Sbjct: 589 GIVRHFIVRK-IPQQNGVSEHMNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPS 647
Query: 277 AVIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKL 101
+ IGGKTPLE+WSG+ A+DY LRIF S AY V + DP A++ +F+GF GV GY+L
Sbjct: 648 SAIGGKTPLEVWSGKLATDYDSLRIFDSTAYYHVNESKLDPRAKKALFMGFSAGVKGYRL 707
Query: 100 WDTISERIVLSSDVTFDEASVMKSI 26
W +++ ++S DVTFDE+ ++ I
Sbjct: 708 WYLEAKKTIISRDVTFDESVMLNKI 732
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 361 bits (927), Expect = e-112
Identities = 186/388 (47%), Positives = 254/388 (65%), Gaps = 3/388 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMK- 992
G+IR+K DG IR L VR+VPS+ RN+ISV ALE +G V V+++ GALVVMK
Sbjct: 115 GSIRLKNRDGAIRTLKDVRFVPSLSRNLISVGALEEKGFTVHAEGGVMKIISGALVVMKG 174
Query: 991 IDRDSSSYFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
+ +++ Y+ +G+ LWH+RLGH SL L ++GL+ +
Sbjct: 175 VRKNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQ 234
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
+C L CEHC GKK VKFGT +H G LD VH DVWGPSK ASL G ++V+FVDD
Sbjct: 235 ACKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDF 294
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR +WV M KDEVL +F KW+K +E QTGRKIK + DN G +Y+ DPF++ C G
Sbjct: 295 SRRIWVYAMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNGG--EYTSDPFKKACEESG 352
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RHF + T + +GVA+ MNRTLLE VRC++ +GL + FWA+A++YA HLINRLPS+
Sbjct: 353 IVRHFTVKHT-PQQNGVAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSS 411
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
IGGKTPLE W G+ A+DY L +FG AY V+ + DP A++ IF+G GV GY+LW
Sbjct: 412 AIGGKTPLEKWFGKPATDYDSLHVFGCTAYYHVKESKLDPRAKKAIFMGIASGVKGYRLW 471
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQ 14
+++ ++S DVTFDE++++ + ++Q
Sbjct: 472 CLETKKTIISRDVTFDESTMLGKVTTEQ 499
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 353 bits (906), Expect = e-111
Identities = 181/391 (46%), Positives = 253/391 (64%), Gaps = 3/391 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G+I+++ DG R L VRYVP + +N+IS+ ALES+GL V + +++ T GALV++K
Sbjct: 266 GSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVMLKG 325
Query: 988 DRDSSSYFPRGSAXXXXXXXXXXXXXXXXXR--LWHLRLGHTSMGSLRALSRRGLIDSAL 815
++ Y+ +GS LWH+RLGH SL+ L+++GL+
Sbjct: 326 VMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTK 385
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
+C L CEHC +GK+ VKFGT +H G LD VH DVWGP+K S+GG +FV+FVDD
Sbjct: 386 ACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDF 445
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VWV TM K++VLE+F KW+ VEN TGRKIKVLQ DN G +Y DPF +C G
Sbjct: 446 SRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGG--EYKSDPFLNVCQDCG 503
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RHF +T + +GV++ MN+TL+E V C++ + L R FWA+A+ YA HL+NRLPS+
Sbjct: 504 IVRHFTVRKT-PQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSS 562
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGFR-GVFGYKLW 98
I GKTPLE+WSG+ A+DY L +FGS AY V + DP A++ +F+GF GV GY+LW
Sbjct: 563 AIDGKTPLEVWSGKPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLW 622
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQVQS 5
++ ++S DVTFDE+ ++K + + S
Sbjct: 623 CLEKKKTIISRDVTFDESVMLKKVNPEGTDS 653
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 309 bits (792), Expect = 1e-98
Identities = 157/339 (46%), Positives = 221/339 (65%), Gaps = 4/339 (1%)
Frame = -1
Query: 1030 VIRVTKGALVVMKIDRDSSSYFPRGS---AXXXXXXXXXXXXXXXXXRLWHLRLGHTSMG 860
+++VT GALV++K R + Y+ +GS +LWH+RLGH
Sbjct: 5 ILKVTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGHAGEK 64
Query: 859 SLRALSRRGLIDSALSCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHA 680
SL+ L+++GL+ C L CEHC + K+ VKFGT +H G LD VH +VWGP+K
Sbjct: 65 SLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTP 124
Query: 679 SLGGCRWFVSFVDDCSRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKE 500
SLGG +FV+F+DD SR VWV TM KDEVLE+F KW+ VENQTGRKIK+L+ DN G
Sbjct: 125 SLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGG-- 182
Query: 499 KYSEDPFQELCLREGIQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWAD 320
+Y DPFQ++ GI +HF +T + +GV++ MN+TL+E V C++ + L R FWA+
Sbjct: 183 EYKSDPFQKIGQECGIVQHFTVRKT-PQQNGVSERMNKTLVEKVHCMLSNARLGRKFWAE 241
Query: 319 ALLYACHLINRLPSAVIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERY 140
+ YA HL+NRLPS+ IGGKTPLE+WSG+ +DY LRIF S AY V + DP A++
Sbjct: 242 TVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDYDSLRIFYSTAYYHVNESKLDPRAKKA 301
Query: 139 IFLGFR-GVFGYKLWDTISERIVLSSDVTFDEASVMKSI 26
IF+G GV GY+LW +++ ++S DVTF+E++++ +
Sbjct: 302 IFMGLNAGVKGYRLWCLEAKKTIISRDVTFNESAMLNKV 340
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 304 bits (779), Expect = 5e-92
Identities = 160/392 (40%), Positives = 239/392 (60%), Gaps = 6/392 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSD--VIRVTKGALVVM 995
G I++ M DG +R L VRY+P + +N+IS+ L+ G + D +++V+KGAL VM
Sbjct: 251 GQIKIAMDDGGVRTLTNVRYIPELRKNLISLGTLQENGYSYRSDRDRDILKVSKGALTVM 310
Query: 994 KIDRDSSSYFPRGSAXXXXXXXXXXXXXXXXXRLWHLRLGHTSMGSLRALSRRGLIDSAL 815
++ R + + + + +LWHLRLGH S + L +R L+
Sbjct: 311 RVKRTAGNIY-KLLGNTVVGDVASVESDNDATKLWHLRLGHLSERGMMELHKRSLLKGVC 369
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
SC + C++C +GK+ V+F + H+ G LD VH DVWGP++ AS+GG R+FV+F DD
Sbjct: 370 SCKMDLCKYCVLGKQCRVRFKPMKHKTEGILDYVHSDVWGPTREASMGGSRYFVTFTDDF 429
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR +WV M +K EV FK W+ VENQTGRKIK L+ DN +Y+ F++ C + G
Sbjct: 430 SRKLWVYFMKQKSEVFSKFKLWKAEVENQTGRKIKYLRSDNG--TEYTNSQFEKFCEQHG 487
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
IQRHF +T + +GVA+ MN +L E RCL L++GLS+ FWA+ + AC+LINR P A
Sbjct: 488 IQRHFSVRKT-PQQNGVAERMNMSLTERARCLQLKAGLSKGFWAETINMACYLINRSPRA 546
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRN---ASADPSAERYIFLGF-RGVFGY 107
+ GK E+W+G+ D LRIFG P + + + + DP +++ IF+G+ +GV G+
Sbjct: 547 SLEGKVAEEVWTGKPI-DLDNLRIFGCPTFVHISSEDRSKLDPKSKKCIFVGYSKGVKGF 605
Query: 106 KLWDTISERIVLSSDVTFDEASVMKSIGSQQV 11
KLWD +S+++VLS DV FDE ++K +V
Sbjct: 606 KLWDPVSKKMVLSRDVVFDEQFMLKQSRETEV 637
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 310 bits (795), Expect = 3e-91
Identities = 167/384 (43%), Positives = 232/384 (60%), Gaps = 4/384 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
GT+R+KM DG++R L VR++P M +N+IS+ L+ +G + V++V GAL V++
Sbjct: 829 GTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRG 888
Query: 988 DRDSSSYFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSALS 812
+ + YF GS+ LWH+RLGH S L LS+RGL+ +
Sbjct: 889 NLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCT 948
Query: 811 CNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDCS 632
L CEHC GK+ VKF T +H+ G +D H D+WGPS S GG R+ ++F+DD S
Sbjct: 949 GKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYS 1008
Query: 631 RHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 452
R VWV + K EVL FK+++ +ENQTG+KIK + DN ++ F E C EGI
Sbjct: 1009 RKVWVYFLKSKYEVLINFKQFKALIENQTGKKIKRFRTDNG--LEFCSGEFNEFCKNEGI 1066
Query: 451 QRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSAV 272
RH T + +GVA+ MNRTLLE RC+ +GL FWA+A+ AC+L+NR PS
Sbjct: 1067 VRHRTVRRT-PQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTA 1125
Query: 271 IGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW- 98
I KTP E+WSG A DYS LR+FG PAY V P A++ IFLG+ +GV GY+LW
Sbjct: 1126 IELKTPEEVWSGSPA-DYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWC 1184
Query: 97 -DTISERIVLSSDVTFDEASVMKS 29
D +S + ++S DVTFDE+S+++S
Sbjct: 1185 PDPVSSKFIISRDVTFDESSMLRS 1208
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 310 bits (795), Expect = 3e-91
Identities = 167/384 (43%), Positives = 232/384 (60%), Gaps = 4/384 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
GT+R+KM DG++R L VR++P M +N+IS+ L+ +G + V++V GAL V++
Sbjct: 850 GTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRG 909
Query: 988 DRDSSSYFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSALS 812
+ + YF GS+ LWH+RLGH S L LS+RGL+ +
Sbjct: 910 NLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCT 969
Query: 811 CNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDCS 632
L CEHC GK+ VKF T +H+ G +D H D+WGPS S GG R+ ++F+DD S
Sbjct: 970 GKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYS 1029
Query: 631 RHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 452
R VWV + K EVL FK+++ +ENQTG+KIK + DN ++ F E C EGI
Sbjct: 1030 RKVWVYFLKSKYEVLINFKQFKALIENQTGKKIKRFRTDNG--LEFCSGEFNEFCKNEGI 1087
Query: 451 QRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSAV 272
RH T + +GVA+ MNRTLLE RC+ +GL FWA+A+ AC+L+NR PS
Sbjct: 1088 VRHRTVRRT-PQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTA 1146
Query: 271 IGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW- 98
I KTP E+WSG A DYS LR+FG PAY V P A++ IFLG+ +GV GY+LW
Sbjct: 1147 IELKTPEEVWSGSPA-DYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWC 1205
Query: 97 -DTISERIVLSSDVTFDEASVMKS 29
D +S + ++S DVTFDE+S+++S
Sbjct: 1206 PDPVSSKFIISRDVTFDESSMLRS 1229
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 299 bits (765), Expect = 6e-89
Identities = 166/395 (42%), Positives = 229/395 (57%), Gaps = 7/395 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
GTI++K DG I+ L VR++P + RN+IS+ LES G K V++V+KGA+V++K
Sbjct: 33 GTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKA 92
Query: 988 DRDSSSYFPRGSAXXXXXXXXXXXXXXXXXRLWHLRLGHTSMGSLRALSRRGLIDSALSC 809
+R S Y +GS +LWH+RLGH S + LS++GL+ +
Sbjct: 93 NRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIG 152
Query: 808 NLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDCSR 629
L CEHC GK+ V F T HR G LD +H D+WGPSK S GGCR+ ++ +DD SR
Sbjct: 153 KLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSR 212
Query: 628 HVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGIQ 449
VWV + K+E FKKW+ VE QTG+K+K L+ DN ++ E F E C GI
Sbjct: 213 KVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNG--LEFCEGDFNEFCANHGIA 270
Query: 448 RHFFGEETCGR--LDGVAKMMNRTLLEMVRCLMLQSGL--SRPFWADALLYACHLINRLP 281
RH + G+ +GVA+ +NRT+LE RC++ +GL R W +A AC+LINR P
Sbjct: 271 RH---KTIPGKPQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSP 327
Query: 280 SAVIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGFRGVF-GYK 104
+ + K P EIWSG DYS LRIFG PAY V + P A + IFLG+ GY+
Sbjct: 328 HSSLNFKIPEEIWSGNPI-DYSNLRIFGCPAYAHVNDGKLAPRAIKCIFLGYASESKGYR 386
Query: 103 LW--DTISERIVLSSDVTFDEASVMKSIGSQQVQS 5
LW ++ S R++LS DVTF+E +++ S V S
Sbjct: 387 LWCSESKSRRLILSRDVTFNEDALLSSGKQSSVSS 421
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 299 bits (766), Expect = 2e-87
Identities = 164/389 (42%), Positives = 232/389 (59%), Gaps = 3/389 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
GT+++KM DG IR L VR++P++ R++IS+ L+ +G K +++VTKG+LVVMK
Sbjct: 342 GTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 401
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D S++ Y RG+ LWH+RLGH + L LS+RGL+D
Sbjct: 402 DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQS 461
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
L CEHC GK VKF T H G LD VH D+WGP++ S GG R+ ++ VDD
Sbjct: 462 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDY 521
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + K + +VFK+W+ VE QT RK+K+L+ DN ++ F+ C EG
Sbjct: 522 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEG 579
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH+ T + +GVA+ MNRT++ RCL+ +GL + FWA+A+ AC+LINR PS
Sbjct: 580 IVRHYTVPHT-PQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 638
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
I KTP+E+WSG A +YS LR+FG AY V N +P A + IFLG+ GV GYKLW
Sbjct: 639 AIDKKTPIEVWSGSPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 697
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQV 11
++++V+S +V F E+ ++ S V
Sbjct: 698 CPETKKVVISRNVVFHESVMLHDKPSTNV 726
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 299 bits (766), Expect = 2e-87
Identities = 164/389 (42%), Positives = 232/389 (59%), Gaps = 3/389 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
GT+++KM DG IR L VR++P++ R++IS+ L+ +G K +++VTKG+LVVMK
Sbjct: 549 GTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 608
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D S++ Y RG+ LWH+RLGH + L LS+RGL+D
Sbjct: 609 DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQS 668
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
L CEHC GK VKF T H G LD VH D+WGP++ S GG R+ ++ VDD
Sbjct: 669 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDY 728
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + K + +VFK+W+ VE QT RK+K+L+ DN ++ F+ C EG
Sbjct: 729 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEG 786
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH+ T + +GVA+ MNRT++ RCL+ +GL + FWA+A+ AC+LINR PS
Sbjct: 787 IVRHYTVPHT-PQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 845
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
I KTP+E+WSG A +YS LR+FG AY V N +P A + IFLG+ GV GYKLW
Sbjct: 846 AIDKKTPIEVWSGSPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLW 904
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQV 11
++++V+S +V F E+ ++ S V
Sbjct: 905 CPETKKVVISRNVVFHESVMLHDKPSTNV 933
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 296 bits (759), Expect = 5e-87
Identities = 158/378 (41%), Positives = 226/378 (59%), Gaps = 3/378 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G++++K DG+ R L VR++P M RN+IS+ L++EG K V++V+KG+LV M
Sbjct: 335 GSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIG 394
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D +S++ Y RGS LWH+RLGH S + L +R L+D
Sbjct: 395 DMNSANLYVLRGSTLHGSVTAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCT 454
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
N+ CE C GK VKF T VHR G LD VH D+WGPS+ SLGG R+ ++ +DD
Sbjct: 455 QGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 514
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + KD+ FK+W+ +E QT +++KVL+ DNAG ++ D F + C +EG
Sbjct: 515 SRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAG--EFCSDAFDDYCRKEG 572
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH T + +GVA+ MNRT++ RC++ + +++ FWA+A AC+LINR PS
Sbjct: 573 IVRHHTIPYT-PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSI 631
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
+ KTP+EIWSG A DYS LR+FG AY V N +P A + +FLG+ GV GYKLW
Sbjct: 632 PLNKKTPIEIWSGMPA-DYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLW 690
Query: 97 DTISERIVLSSDVTFDEA 44
+ + + +S V F+E+
Sbjct: 691 NPETNKTFMSRSVVFNES 708
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 294 bits (753), Expect = 3e-86
Identities = 164/389 (42%), Positives = 232/389 (59%), Gaps = 3/389 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
GT+++KM DG IR L VR++P++ R++IS+ L+ +G K +++VTKG+LVVMK
Sbjct: 251 GTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 310
Query: 988 D-RDSSSYFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D + ++ Y RG+ LWH+RLGH S L LS+RGL+D
Sbjct: 311 DIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQS 370
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
L CEHC GK VKF T H G LD VH D+WGP++ S GG R+ ++ VDD
Sbjct: 371 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDY 430
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + K + +VFK+W+ VE QT RK+K+L+ DN G E S+ F+ C EG
Sbjct: 431 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDN-GMELCSK-IFKSYCKSEG 488
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH+ T + +GVA+ MNRT++ RC++ + L + FWA+A+ AC+LINR PS
Sbjct: 489 IVRHYTVPHT-PQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSY 547
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
I KTP+E+WSG A +YS LR+FG AY V N +P + IFLG+ GV GYKLW
Sbjct: 548 AIDKKTPIEVWSGSPA-NYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLW 606
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQV 11
++++V+S +V F E+ ++ S V
Sbjct: 607 CPETKKVVISRNVVFHESIMLHDKPSTNV 635
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 290 bits (742), Expect = 3e-86
Identities = 159/389 (40%), Positives = 228/389 (58%), Gaps = 3/389 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G +++KM DG I L VR++P++ R++IS+ L+ +G K +++VTKG+LVVMK
Sbjct: 174 GIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 233
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D S++ Y RG+ LWH+RLGH S L LS+RGL+D
Sbjct: 234 DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQS 293
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
L CEHC GK VKF T H G LD VH D+WGP++ S GG R+ ++ VDD
Sbjct: 294 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDY 353
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + K + +VFK+W+ VE QT RK+K+L+ DN ++ F+ C EG
Sbjct: 354 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEG 411
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH+ ++ +GVA+ MNRT++ RC++ +GL + FWA A+ C+LINR PS
Sbjct: 412 IVRHYTPQQ-----NGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSY 466
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
I KTP+++WSG A +YS LR+FG AY V N +P A + IFLG+ GV GYKLW
Sbjct: 467 AIDKKTPIKVWSGFPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLW 525
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQV 11
++++V+S +V F E+ ++ S V
Sbjct: 526 CPETKKVVISRNVVFHESVMLHDKPSTNV 554
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
Length = 944
Score = 290 bits (742), Expect = 3e-86
Identities = 159/389 (40%), Positives = 228/389 (58%), Gaps = 3/389 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G +++KM DG I L VR++P++ R++IS+ L+ +G K +++VTKG+LVVMK
Sbjct: 174 GIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 233
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D S++ Y RG+ LWH+RLGH S L LS+RGL+D
Sbjct: 234 DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQS 293
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
L CEHC GK VKF T H G LD VH D+WGP++ S GG R+ ++ VDD
Sbjct: 294 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDY 353
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + K + +VFK+W+ VE QT RK+K+L+ DN ++ F+ C EG
Sbjct: 354 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNG--MEFCSKIFKSYCKSEG 411
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH+ ++ +GVA+ MNRT++ RC++ +GL + FWA A+ C+LINR PS
Sbjct: 412 IVRHYTPQQ-----NGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSY 466
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
I KTP+++WSG A +YS LR+FG AY V N +P A + IFLG+ GV GYKLW
Sbjct: 467 AIDKKTPIKVWSGFPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLW 525
Query: 97 DTISERIVLSSDVTFDEASVMKSIGSQQV 11
++++V+S +V F E+ ++ S V
Sbjct: 526 CPETKKVVISRNVVFHESVMLHDKPSTNV 554
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1175
Score = 293 bits (750), Expect = 4e-86
Identities = 154/378 (40%), Positives = 224/378 (59%), Gaps = 3/378 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G++++K DGM R L VR++P M RN+IS+ L++EG K V++V+KG+LV M
Sbjct: 230 GSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIG 289
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D +S++ Y RGS +WH+RLGH S + L +R L+D
Sbjct: 290 DMNSANLYVLRGSTLHGYVTAAVVSKDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCT 349
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
N+ CEHC GK VKF T VHR G LD VH D+WGPS+ SLGG R+ ++ +DD
Sbjct: 350 QGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 409
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR VW + KD+ FK+W+ ++ QT +++KVL+ DN G + D F + C +EG
Sbjct: 410 SRKVWPYFLKHKDDTFAAFKEWKVMIKRQTEKEVKVLRTDNGG--GFCSDAFDDYCRKEG 467
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I H T + +GVA+ MNRT++ RC++ + +++ FWA+A AC+LINR PS
Sbjct: 468 IVMHHTIPYT-PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAAKTACYLINRSPSI 526
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
+ KTP+E+WSG A +YS LR+FG AY V N +P A + +FLG+ GV GYKLW
Sbjct: 527 SLNKKTPIEVWSGMPA-NYSQLRVFGCTAYAHVNNGKLEPRAIKCLFLGYGSGVKGYKLW 585
Query: 97 DTISERIVLSSDVTFDEA 44
+ + + +S V F+E+
Sbjct: 586 NPETNKTFMSRSVVFNES 603
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 293 bits (749), Expect = 2e-85
Identities = 161/392 (41%), Positives = 229/392 (58%), Gaps = 6/392 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G++++K DGM R L VRY+P M RN+IS+ L++EG K V++V+KG+LV +K
Sbjct: 333 GSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKG 392
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR--LWHLRLGHTSMGSLRALSRRGLIDSA 818
D +S+ Y RG + LWH+RLGH S + L +R L+
Sbjct: 393 DLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGC 452
Query: 817 LSCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDD 638
S + CEHC GK V+F T VH G LD VH D+WGPSK SLGG R+ ++ +DD
Sbjct: 453 TSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDD 512
Query: 637 CSRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLRE 458
SR VW + KD+ FK W+ +E QT RK+K+L+ DN G ++ F + C +E
Sbjct: 513 YSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGG--EFCSHAFNDYCRQE 570
Query: 457 GIQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPS 278
GI RH T + +GVA+ MNRT++ RC++ + +++ FWA+A AC+LINR PS
Sbjct: 571 GIVRHHTIPHT-PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 629
Query: 277 AVIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKL 101
+ KTP+E+WSG A DYS L++FG AY V N +P A + +FLG+ GV GYKL
Sbjct: 630 IPLNKKTPIEVWSGTPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKL 688
Query: 100 WDTISERIVLSSDVTFDEASVM--KSIGSQQV 11
W+ + + +S V F+E SVM S+ S+ V
Sbjct: 689 WNPETGKTFMSRSVVFNE-SVMFTNSLPSEHV 719
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 291 bits (744), Expect = 2e-85
Identities = 154/377 (40%), Positives = 223/377 (59%), Gaps = 3/377 (0%)
Frame = -1
Query: 1165 TIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKID 986
++++K DGM R L VR++P M RN+IS+ L++EG K V++V+KG+LV M D
Sbjct: 276 SVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGD 335
Query: 985 RDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSALS 812
+S++ Y RGS LWH+RLGH S + L +R L+D
Sbjct: 336 MNSTNLYVLRGSTLHGSITAAAVSKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQ 395
Query: 811 CNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDCS 632
N+ CEHC GK VKF T VHR G LD VH D+WGPS+ SLGG + ++ +DD S
Sbjct: 396 GNMKFCEHCVFGKHKRVKFNTSVHRSKGILDYVHADLWGPSRKPSLGGACYMLTIIDDYS 455
Query: 631 RHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREGI 452
R VW + KD+ FK+W+ +E QT +++KVL+ D+ G ++ D F + C +EGI
Sbjct: 456 RKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDSGG--EFCSDAFDDYCRKEGI 513
Query: 451 QRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSAV 272
RH T + +GVA+ MNRT++ RC++ + +++ FWA+ AC+LINR PS
Sbjct: 514 VRHHTIPYT-PQQNGVAERMNRTIISNTRCMLSNARMNKRFWAEVANTACYLINRSPSIP 572
Query: 271 IGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLWD 95
+ KTP+E+WSG A DYS LR+FG AY V N +P A + +FLG+ GV GYKLW+
Sbjct: 573 LNKKTPIEVWSGMPA-DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWN 631
Query: 94 TISERIVLSSDVTFDEA 44
+ + +S V F+E+
Sbjct: 632 PKTNKTFMSRSVVFNES 648
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 292 bits (748), Expect = 2e-85
Identities = 161/392 (41%), Positives = 229/392 (58%), Gaps = 6/392 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G++++K DGM R L VRY+P M RN+IS+ L++EG K V++V+KG+LV +K
Sbjct: 333 GSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKG 392
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR--LWHLRLGHTSMGSLRALSRRGLIDSA 818
D +S+ Y RG + LWH+RLGH S + L +R L+
Sbjct: 393 DLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGC 452
Query: 817 LSCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDD 638
S + CEHC GK V+F T VH G LD VH D+WGPSK SLGG R+ ++ +DD
Sbjct: 453 TSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDD 512
Query: 637 CSRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLRE 458
SR VW + KD+ FK W+ +E QT RK+K+L+ DN G ++ F + C +E
Sbjct: 513 YSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGG--EFCSHAFNDYCRQE 570
Query: 457 GIQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPS 278
GI RH T + +GVA+ MNRT++ RC++ + +++ FWA+A AC+LINR PS
Sbjct: 571 GIVRHHTIPHT-PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 629
Query: 277 AVIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKL 101
+ KTP+E+WSG A DYS L++FG AY V N +P A + +FLG+ GV GYKL
Sbjct: 630 IPLNKKTPIEVWSGMPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKL 688
Query: 100 WDTISERIVLSSDVTFDEASVM--KSIGSQQV 11
W+ + + +S V F+E SVM S+ S+ V
Sbjct: 689 WNPETGKTFMSRSVVFNE-SVMFTNSLPSEHV 719
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 292 bits (748), Expect = 3e-85
Identities = 161/392 (41%), Positives = 229/392 (58%), Gaps = 6/392 (1%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G++++K DGM R L VRY+P M RN+IS+ L++EG K V++V+KG+LV +K
Sbjct: 333 GSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKG 392
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR--LWHLRLGHTSMGSLRALSRRGLIDSA 818
D +S+ Y RG + LWH+RLGH S + L +R L+
Sbjct: 393 DVNSAKLYVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGC 452
Query: 817 LSCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDD 638
S + CEHC GK V+F T VH G LD VH D+WGPSK SLGG R+ ++ +DD
Sbjct: 453 TSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDD 512
Query: 637 CSRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLRE 458
SR VW + KD+ FK W+ +E QT RK+K+L+ DN G ++ F + C +E
Sbjct: 513 YSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGG--EFCSHAFNDYCRQE 570
Query: 457 GIQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPS 278
GI RH T + +GVA+ MNRT++ RC++ + +++ FWA+A AC+LINR PS
Sbjct: 571 GIVRHHTIPHT-PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 629
Query: 277 AVIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKL 101
+ KTP+E+WSG A DYS L++FG AY V N +P A + +FLG+ GV GYKL
Sbjct: 630 IPLNKKTPIEVWSGTPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKL 688
Query: 100 WDTISERIVLSSDVTFDEASVM--KSIGSQQV 11
W+ + + +S V F+E SVM S+ S+ V
Sbjct: 689 WNPETGKTFMSRSVVFNE-SVMFTNSLPSEHV 719
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 291 bits (744), Expect = 8e-85
Identities = 157/377 (41%), Positives = 223/377 (59%), Gaps = 3/377 (0%)
Frame = -1
Query: 1168 GTIRVKMVDGMIRELHGVRYVPSMGRNVISVRALESEGLKVKLVSDVIRVTKGALVVMKI 989
G++++K DGM R L VR++P M RN+IS+ L++EG K V++V+KG+LV M
Sbjct: 335 GSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIG 394
Query: 988 DRDSSS-YFPRGSAXXXXXXXXXXXXXXXXXR-LWHLRLGHTSMGSLRALSRRGLIDSAL 815
D +S++ Y RGS LWH+RLGH S + L +R L+D
Sbjct: 395 DMNSANLYVLRGSTLHGSVTAAAVTKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCT 454
Query: 814 SCNLTSCEHCSVGKKATVKFGTVVHRPSGFLDLVHVDVWGPSKHASLGGCRWFVSFVDDC 635
N+ CEHC GK VKF T VHR G LD VH D+WGPS+ SLGG R+ ++ +DD
Sbjct: 455 QGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 514
Query: 634 SRHVWVATMSRKDEVLEVFKKWRKCVENQTGRKIKVLQFDNAGKEKYSEDPFQELCLREG 455
SR W + KD+ FK+ + +E QT +++KVL DN G ++ D F + C +EG
Sbjct: 515 SRKEWPYFLKHKDDTFAAFKERKVMIERQTEKEVKVLCTDNGG--EFCSDAFDDYCRKEG 572
Query: 454 IQRHFFGEETCGRLDGVAKMMNRTLLEMVRCLMLQSGLSRPFWADALLYACHLINRLPSA 275
I RH T + +GVA+ MNRT++ RC++ + +++ FWA+A AC+LINR PS
Sbjct: 573 IVRHHTIPYT-PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSI 631
Query: 274 VIGGKTPLEIWSGRAASDYSLLRIFGSPAYCRVRNASADPSAERYIFLGF-RGVFGYKLW 98
+ KTP+EIWSG A DYS LR+FG AY V N +P A + +FLG+ GV GYKLW
Sbjct: 632 PLNKKTPIEIWSGMPA-DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLW 690
Query: 97 DTISERIVLSSDVTFDE 47
+ + + +S +V F+E
Sbjct: 691 NPETNKTFMSRNVIFNE 707