BLASTX nr result

ID: Ophiopogon22_contig00017358 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00017358
         (549 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    60   3e-07
gb|PHT49932.1| hypothetical protein CQW23_09679 [Capsicum baccatum]    54   6e-06
gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]    56   8e-06

>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/58 (51%), Positives = 36/58 (62%)
 Frame = -1

Query: 174 MSSAIKFDIQKFDGVINFSRWQVRMNAILTQHXXXXXXXXXXXKPSTMKDEDWQELDE 1
           MS+  KFDI+KFDG I FS W+V+M A+LTQ+           KP  M DE W ELDE
Sbjct: 1   MSTVTKFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDE 58


>gb|PHT49932.1| hypothetical protein CQW23_09679 [Capsicum baccatum]
          Length = 134

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = -1

Query: 159 KFDIQKFDGVINFSRWQVRMNAILTQHXXXXXXXXXXXKPSTMKDEDWQELDE 1
           KFDI+KFDG I+F+ W+V+M A+LTQ+           KP+T  +E W+E DE
Sbjct: 4   KFDIEKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPATTTEEQWEETDE 56


>gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]
          Length = 553

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = -1

Query: 165 AIKFDIQKFDGVINFSRWQVRMNAILTQHXXXXXXXXXXXKPSTMKDEDWQELDE 1
           ++KFDI+KFDG I+F+ W+V+M A+LTQ+           KP+T  +E W+E+DE
Sbjct: 2   SMKFDIEKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPATTTEEQWEEMDE 56


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