BLASTX nr result
ID: Ophiopogon22_contig00016097
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00016097
(621 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK79251.1| uncharacterized protein A4U43_C01F4460 [Asparagus... 123 1e-31
gb|ONK65320.1| uncharacterized protein A4U43_C07F35910 [Asparagu... 123 4e-30
ref|XP_020252872.1| RNA polymerase sigma factor sigD, chloroplas... 110 6e-27
ref|XP_020272724.1| RNA polymerase sigma factor sigD, chloroplas... 110 7e-27
ref|XP_020254230.1| RNA polymerase sigma factor sigD, chloroplas... 110 3e-25
ref|XP_010922212.1| PREDICTED: RNA polymerase sigma factor sigD,... 80 4e-14
ref|XP_020100505.1| RNA polymerase sigma factor sigD, chloroplas... 76 1e-12
ref|XP_008806591.1| PREDICTED: RNA polymerase sigma factor sigD,... 75 2e-12
ref|XP_020692146.1| RNA polymerase sigma factor sigD, chloroplas... 69 3e-10
ref|XP_018680387.1| PREDICTED: RNA polymerase sigma factor sigD,... 68 7e-10
ref|XP_018680386.1| PREDICTED: RNA polymerase sigma factor sigD,... 68 7e-10
ref|XP_009397071.1| PREDICTED: RNA polymerase sigma factor sigD,... 68 8e-10
ref|XP_009397070.1| PREDICTED: RNA polymerase sigma factor sigD,... 68 8e-10
ref|XP_009397069.1| PREDICTED: RNA polymerase sigma factor sigD,... 68 8e-10
>gb|ONK79251.1| uncharacterized protein A4U43_C01F4460 [Asparagus officinalis]
Length = 216
Score = 123 bits (309), Expect = 1e-31
Identities = 83/201 (41%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Frame = +2
Query: 20 MPACSVNRXXXXXXXXXXXXXXXXXXXQFPQXXXXXXXXXXXKQNSNVIVSDDSFTIXXX 199
MP+CS+NR Q PQ KQ+SN+++SDDSFTI
Sbjct: 1 MPSCSLNRSLATLSLPLTHSISSKTSVQIPQSPS--------KQSSNLVISDDSFTIAAI 52
Query: 200 XXXXXXXXXXXXXXXXXXXXXXXXXQIGDGQDVCFGEGGVAAXXXXXXXXXXXTTELYDN 379
Q+ G GG ++
Sbjct: 53 VEAVSLANAAAEAAKDAVSSALVLEQLEIG-------GGDGCRRRRRMRKRKRMMGVFSY 105
Query: 380 SDDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDS-QCTTTAGRTER 556
+DD ++KG LS+SERSRYLTRRQEAEFS+ LKVGAMLEDTDS TTA ER
Sbjct: 106 FEDDEGLGGNVVKGSLSKSERSRYLTRRQEAEFSVSLKVGAMLEDTDSISNNTTAEAIER 165
Query: 557 RGKTDKACLRARECRERITLS 619
RGK DKACLRARECRERITLS
Sbjct: 166 RGKADKACLRARECRERITLS 186
>gb|ONK65320.1| uncharacterized protein A4U43_C07F35910 [Asparagus officinalis]
Length = 368
Score = 123 bits (309), Expect = 4e-30
Identities = 83/201 (41%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Frame = +2
Query: 20 MPACSVNRXXXXXXXXXXXXXXXXXXXQFPQXXXXXXXXXXXKQNSNVIVSDDSFTIXXX 199
MP+CS+NR Q PQ KQ+SN+++SDDSFTI
Sbjct: 1 MPSCSLNRSLATLSLPLTHSISSKTSVQIPQSPS--------KQSSNLVISDDSFTIAAI 52
Query: 200 XXXXXXXXXXXXXXXXXXXXXXXXXQIGDGQDVCFGEGGVAAXXXXXXXXXXXTTELYDN 379
Q+ G GG ++
Sbjct: 53 VEAVSLANAAAEAAKDAVSSALVLEQLEIG-------GGDGCRRRRRMRKRKRMMGVFSY 105
Query: 380 SDDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDS-QCTTTAGRTER 556
+DD ++KG LS+SERSRYLTRRQEAEFS+ LKVGAMLEDTDS TTA ER
Sbjct: 106 FEDDEGLGGNVVKGSLSKSERSRYLTRRQEAEFSVSLKVGAMLEDTDSISNNTTAEAIER 165
Query: 557 RGKTDKACLRARECRERITLS 619
RGK DKACLRARECRERITLS
Sbjct: 166 RGKADKACLRARECRERITLS 186
>ref|XP_020252872.1| RNA polymerase sigma factor sigD, chloroplastic-like [Asparagus
officinalis]
Length = 188
Score = 110 bits (276), Expect = 6e-27
Identities = 59/80 (73%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +2
Query: 383 DDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDS-QCTTTAGRTERR 559
+DD ++KG LS+SERSRYLTRRQEAEFS+ LKVGAMLEDTDS TTA ERR
Sbjct: 79 EDDEGLGGNVVKGSLSKSERSRYLTRRQEAEFSVSLKVGAMLEDTDSISNNTTAEAIERR 138
Query: 560 GKTDKACLRARECRERITLS 619
GK DKACLRARECRERITLS
Sbjct: 139 GKADKACLRARECRERITLS 158
>ref|XP_020272724.1| RNA polymerase sigma factor sigD, chloroplastic-like [Asparagus
officinalis]
Length = 193
Score = 110 bits (276), Expect = 7e-27
Identities = 59/80 (73%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +2
Query: 383 DDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDS-QCTTTAGRTERR 559
+DD ++KG LS+SERSRYLTRRQEAEFS+ LKVGAMLEDTDS TTA ERR
Sbjct: 79 EDDEGLGGNVVKGSLSKSERSRYLTRRQEAEFSVSLKVGAMLEDTDSISNNTTAEAIERR 138
Query: 560 GKTDKACLRARECRERITLS 619
GK DKACLRARECRERITLS
Sbjct: 139 GKADKACLRARECRERITLS 158
>ref|XP_020254230.1| RNA polymerase sigma factor sigD, chloroplastic-like [Asparagus
officinalis]
Length = 388
Score = 110 bits (276), Expect = 3e-25
Identities = 59/80 (73%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +2
Query: 383 DDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDS-QCTTTAGRTERR 559
+DD ++KG LS+SERSRYLTRRQEAEFS+ LKVGAMLEDTDS TTA ERR
Sbjct: 79 EDDEGLGGNVVKGSLSKSERSRYLTRRQEAEFSVSLKVGAMLEDTDSISNNTTAEAIERR 138
Query: 560 GKTDKACLRARECRERITLS 619
GK DKACLRARECRERITLS
Sbjct: 139 GKADKACLRARECRERITLS 158
>ref|XP_010922212.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Elaeis
guineensis]
Length = 455
Score = 80.5 bits (197), Expect = 4e-14
Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 10/92 (10%)
Frame = +2
Query: 374 DNSDDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDT----------DS 523
D++ DD D LI+G SRSERSRYLT R+EAEFS YLK AMLE DS
Sbjct: 135 DDNKDDEDSNSYLIEGCSSRSERSRYLTTREEAEFSRYLKQEAMLETAGKQIRECSPLDS 194
Query: 524 QCTTTAGRTERRGKTDKACLRARECRERITLS 619
C A R +RR +++ L+ARECRERITLS
Sbjct: 195 GCAAIAARMKRR-HSERTLLKARECRERITLS 225
>ref|XP_020100505.1| RNA polymerase sigma factor sigD, chloroplastic [Ananas comosus]
Length = 430
Score = 76.3 bits (186), Expect = 1e-12
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +2
Query: 374 DNSDDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDSQ----CTTTA 541
D+ ++D R + + R S+ E+SRYLTRRQEA+FS+YLK AMLE ++Q +TT+
Sbjct: 115 DDEEEDGRMFRAVEQRRFSKVEKSRYLTRRQEAQFSLYLKEEAMLEKENNQMGEFTSTTS 174
Query: 542 GRTERRGKTDKACLRARECRERITLS 619
RR DKA LRARE RERI LS
Sbjct: 175 AELIRRSSRDKALLRARESRERIILS 200
>ref|XP_008806591.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Phoenix
dactylifera]
Length = 449
Score = 75.5 bits (184), Expect = 2e-12
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 12/93 (12%)
Frame = +2
Query: 377 NSDDDVDP--ARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDT----------D 520
N DD+ D +R L++G SRSERSRYLT R+EAEFS YLK AMLE D
Sbjct: 128 NDDDEADEYSSRYLMEGCSSRSERSRYLTPREEAEFSHYLKQEAMLETAGKQIRDCSPLD 187
Query: 521 SQCTTTAGRTERRGKTDKACLRARECRERITLS 619
S C + +RR +++ L+ARECRERITLS
Sbjct: 188 SGCAAISASMKRR-NSERTLLKARECRERITLS 219
>ref|XP_020692146.1| RNA polymerase sigma factor sigD, chloroplastic [Dendrobium
catenatum]
Length = 425
Score = 69.3 bits (168), Expect = 3e-10
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 374 DNSDDDVDPARRLIKGRLSRSERSRYLTRRQEAEFSIYLKVGAMLEDTDSQCTTT-AGRT 550
D S D L + LS++ERSRYLT QEAEFS LKV AM+E + T++ A R
Sbjct: 113 DLSGKDNAEGSGLAESCLSKTERSRYLTWDQEAEFSSCLKVVAMMEVPSGRKTSSGAARM 172
Query: 551 ERRGKTDKACLRARECRERITLS 619
RR + D+A L+ARECRERIT S
Sbjct: 173 RRRRRNDRALLKARECRERITKS 195
>ref|XP_018680387.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X5 [Musa acuminata subsp. malaccensis]
Length = 364
Score = 68.2 bits (165), Expect = 7e-10
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 11/93 (11%)
Frame = +2
Query: 374 DNSDDDVDPARRLI-KGRLSRSERSRYLTRRQEAEFSIYLKVGAMLE----------DTD 520
D+S++D +R L+ K SRSERS+YLT RQEAEFS YLK AM++ D
Sbjct: 149 DDSEEDGIASRFLLGKTCSSRSERSKYLTSRQEAEFSRYLKEEAMMDAEAQLLRGCSSLD 208
Query: 521 SQCTTTAGRTERRGKTDKACLRARECRERITLS 619
S+ GR +RR ++KA LRARE RERITLS
Sbjct: 209 SENVAQYGRMKRR--SEKAFLRARESRERITLS 239
>ref|XP_018680386.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X4 [Musa acuminata subsp. malaccensis]
Length = 377
Score = 68.2 bits (165), Expect = 7e-10
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 11/93 (11%)
Frame = +2
Query: 374 DNSDDDVDPARRLI-KGRLSRSERSRYLTRRQEAEFSIYLKVGAMLE----------DTD 520
D+S++D +R L+ K SRSERS+YLT RQEAEFS YLK AM++ D
Sbjct: 149 DDSEEDGIASRFLLGKTCSSRSERSKYLTSRQEAEFSRYLKEEAMMDAEAQLLRGCSSLD 208
Query: 521 SQCTTTAGRTERRGKTDKACLRARECRERITLS 619
S+ GR +RR ++KA LRARE RERITLS
Sbjct: 209 SENVAQYGRMKRR--SEKAFLRARESRERITLS 239
>ref|XP_009397071.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X3 [Musa acuminata subsp. malaccensis]
Length = 468
Score = 68.2 bits (165), Expect = 8e-10
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 11/93 (11%)
Frame = +2
Query: 374 DNSDDDVDPARRLI-KGRLSRSERSRYLTRRQEAEFSIYLKVGAMLE----------DTD 520
D+S++D +R L+ K SRSERS+YLT RQEAEFS YLK AM++ D
Sbjct: 149 DDSEEDGIASRFLLGKTCSSRSERSKYLTSRQEAEFSRYLKEEAMMDAEAQLLRGCSSLD 208
Query: 521 SQCTTTAGRTERRGKTDKACLRARECRERITLS 619
S+ GR +RR ++KA LRARE RERITLS
Sbjct: 209 SENVAQYGRMKRR--SEKAFLRARESRERITLS 239
>ref|XP_009397070.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 472
Score = 68.2 bits (165), Expect = 8e-10
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 11/93 (11%)
Frame = +2
Query: 374 DNSDDDVDPARRLI-KGRLSRSERSRYLTRRQEAEFSIYLKVGAMLE----------DTD 520
D+S++D +R L+ K SRSERS+YLT RQEAEFS YLK AM++ D
Sbjct: 149 DDSEEDGIASRFLLGKTCSSRSERSKYLTSRQEAEFSRYLKEEAMMDAEAQLLRGCSSLD 208
Query: 521 SQCTTTAGRTERRGKTDKACLRARECRERITLS 619
S+ GR +RR ++KA LRARE RERITLS
Sbjct: 209 SENVAQYGRMKRR--SEKAFLRARESRERITLS 239
>ref|XP_009397069.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 481
Score = 68.2 bits (165), Expect = 8e-10
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 11/93 (11%)
Frame = +2
Query: 374 DNSDDDVDPARRLI-KGRLSRSERSRYLTRRQEAEFSIYLKVGAMLE----------DTD 520
D+S++D +R L+ K SRSERS+YLT RQEAEFS YLK AM++ D
Sbjct: 149 DDSEEDGIASRFLLGKTCSSRSERSKYLTSRQEAEFSRYLKEEAMMDAEAQLLRGCSSLD 208
Query: 521 SQCTTTAGRTERRGKTDKACLRARECRERITLS 619
S+ GR +RR ++KA LRARE RERITLS
Sbjct: 209 SENVAQYGRMKRR--SEKAFLRARESRERITLS 239