BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00015920
         (2362 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen...   231   9e-64
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   228   1e-62
gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagu...   219   9e-62
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]       234   5e-61
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   233   2e-60
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   233   2e-60
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     232   3e-60
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...   223   2e-59
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   228   3e-59
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   228   4e-59
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   225   9e-58
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     224   1e-57
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   215   2e-57
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]   216   2e-57
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   224   3e-57
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   223   4e-57
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     223   4e-57
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   223   4e-57
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     221   2e-56
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                 220   3e-56

>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 502

 Score =  231 bits (590), Expect = 9e-64
 Identities = 118/193 (61%), Positives = 145/193 (75%), Gaps = 2/193 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKHTSIRLLL++  Q+D+E+EQMDVKT FLHG+LEE IYM QP+G+++ G E  VC L+K
Sbjct: 71   VKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKEDLVCRLRK 130

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVY--IKQDLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FDT+M    + RC Y+ CVY  + +D E   LLLYVDD+LIA +D
Sbjct: 131  SLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEIILLLLYVDDMLIACKD 190

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
            M  IEE+K  L  EFDMKDLGA + ILGIEI RDR  GK+ LSQE YIL+VL+RF+MD A
Sbjct: 191  MSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQEKYILRVLERFNMDGA 250

Query: 1826 RPVSTRMADHLPL 1788
            + VS  +A H  L
Sbjct: 251  KVVSIPLAAHYQL 263


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 503

 Score =  228 bits (582), Expect = 1e-62
 Identities = 120/212 (56%), Positives = 153/212 (72%), Gaps = 4/212 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            V+HTSIR+LLA V  FDLELEQ+DVKT FLHGELEE+IYM QP+G++    E  VC L+K
Sbjct: 71   VRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKK 130

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQDLEST--YLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD+FM    + R +Y+ C+Y +Q  + T  YLLLYVDD+LIA+RD
Sbjct: 131  SLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRD 190

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
               I ++K  L  EF+MK+LGA +KILG+EI RDR VGKL LSQ+ YI ++L RF+M+  
Sbjct: 191  KSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNC 250

Query: 1826 RPVSTRMADHLPL--DRIAFIKEEKLRLHHLP 1737
            +PVST +A H  L  D     KEE  R+ H+P
Sbjct: 251  KPVSTPLAAHFKLSSDLCPQTKEEMERMSHVP 282


>gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagus officinalis]
          Length = 299

 Score =  219 bits (559), Expect = 9e-62
 Identities = 116/193 (60%), Positives = 145/193 (75%), Gaps = 2/193 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            +KHTSIR+L A+V  F+LELEQ+DVKT FLHGEL+E+I+M QP+G+I  G E  VC L+K
Sbjct: 51   IKHTSIRVLFAMVAHFNLELEQLDVKTAFLHGELDEQIFMHQPEGFIVEGKEDHVCRLKK 110

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQ--DLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWY  FDTFM    + R +Y+SCVY K+  D    YLLLYVDD+LIAA+D
Sbjct: 111  SLYGLKQSPRQWYLRFDTFMFEHGYSRNKYDSCVYHKKLNDGFFVYLLLYVDDMLIAAKD 170

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
            M  I E+K+ L+ EF+MK+LGAT+KILG+EI R+R  G L LSQE YI KVL+RF M  A
Sbjct: 171  MSEINELKSQLKHEFEMKNLGATKKILGMEIHRNRREGSLFLSQEKYIKKVLERFGMLDA 230

Query: 1826 RPVSTRMADHLPL 1788
            +PV T +A H  L
Sbjct: 231  KPVKTLLAAHFRL 243


>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1212

 Score =  234 bits (598), Expect = 5e-61
 Identities = 122/197 (61%), Positives = 148/197 (75%), Gaps = 2/197 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH +IR+LLA+V+  DL LEQ+DVKT FLHG LEE+IYM QP+G+ID  NE  VCLLQK
Sbjct: 782  VKHKTIRVLLAMVSTLDLYLEQLDVKTAFLHGNLEEQIYMSQPEGFIDSENEDHVCLLQK 841

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQ--DLESTYLLLYVDDILIAARD 2007
             LYGLKQ  RQWYK FD+FM   +F R +Y++CVY K+  D    YLLLYVDD+LIAA+D
Sbjct: 842  FLYGLKQSPRQWYKRFDSFMVSHDFARNQYDNCVYSKKLSDGSYIYLLLYVDDMLIAAKD 901

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
            +  I  +K LL  EF+MKDLGA +KILG+EI RDR VG L +SQ+ YI KVL+ F MDKA
Sbjct: 902  LAEINSLKALLSSEFEMKDLGAAKKILGMEIWRDRKVGLLYVSQQKYIEKVLQSFQMDKA 961

Query: 1826 RPVSTRMADHLPLDRIA 1776
            +PVST +A H  LD  A
Sbjct: 962  KPVSTPLAAHFKLDASA 978


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  233 bits (595), Expect = 2e-60
 Identities = 122/212 (57%), Positives = 159/212 (75%), Gaps = 4/212 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR+LLA+V + DLELEQ+DVKT FLHGELEE IYM+QP+G+   G E  VCLL+K
Sbjct: 1411 VKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKK 1470

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQ--DLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD+FM    + RC+Y++CVY ++  D    YLLLYVDD+LIA+++
Sbjct: 1471 SLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKN 1530

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
            M  I ++K+ L  EF+MKDLGA +KILG++I RDR  GKL +SQ+NYI KVL+RF MDKA
Sbjct: 1531 MSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKA 1590

Query: 1826 RPVSTRMADHLPL--DRIAFIKEEKLRLHHLP 1737
            + VST +A H  L  +      EEK ++ H+P
Sbjct: 1591 KTVSTPLAPHFKLSAELSPQSDEEKQQMSHIP 1622


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  233 bits (595), Expect = 2e-60
 Identities = 122/212 (57%), Positives = 159/212 (75%), Gaps = 4/212 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR+LLA+V + DLELEQ+DVKT FLHGELEE IYM+QP+G+   G E  VCLL+K
Sbjct: 1390 VKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKK 1449

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQ--DLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD+FM    + RC+Y++CVY ++  D    YLLLYVDD+LIA+++
Sbjct: 1450 SLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKN 1509

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
            M  I ++K+ L  EF+MKDLGA +KILG++I RDR  GKL +SQ+NYI KVL+RF MDKA
Sbjct: 1510 MSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKA 1569

Query: 1826 RPVSTRMADHLPL--DRIAFIKEEKLRLHHLP 1737
            + VST +A H  L  +      EEK ++ H+P
Sbjct: 1570 KTVSTPLAPHFKLSAELSPQSDEEKQQMSHIP 1601


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  232 bits (592), Expect = 3e-60
 Identities = 116/193 (60%), Positives = 148/193 (76%), Gaps = 2/193 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKHTSIRLLL++  Q+D+E+EQMDVKT FLHG+LEE IYM QP+G+++ G E  VC L+K
Sbjct: 871  VKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKK 930

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVY--IKQDLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FDT+M    + RC+Y+ CVY  + +D +   LLLYVDD+LIA RD
Sbjct: 931  SLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRD 990

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
            ML I+++K  L  EFDMKDLGA +KILGIEI RDR  GK+ LSQE YI+K+L+RF+M +A
Sbjct: 991  MLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKILERFNMAEA 1050

Query: 1826 RPVSTRMADHLPL 1788
            + VS  +A H  L
Sbjct: 1051 KVVSIPLAAHFRL 1063


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score =  223 bits (567), Expect = 2e-59
 Identities = 117/209 (55%), Positives = 149/209 (71%), Gaps = 2/209 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            V+HTSIR+LLA V  FDLELEQ+DVKT FLHGELEE+IYM+Q  G+I  G E  VC L+K
Sbjct: 254  VRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQSDGFIAPGKEHLVCRLKK 313

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK--QDLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK F +FM   N+ + +Y+ C+Y +  Q+    YLLLYVDD+LIA+RD
Sbjct: 314  SLYGLKQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRD 373

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
               I+++KT L  EFDMK+LGA +KILG+EI RDR  GKL LSQ+ YI +VL RF+M+  
Sbjct: 374  KSLIKKLKTELSNEFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNMNNC 433

Query: 1826 RPVSTRMADHLPLDRIAFIKEEKLRLHHL 1740
            +PVST +A H  L    F    K  + H+
Sbjct: 434  KPVSTPLAAHFKLSS-EFCPNTKEEMEHI 461


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  228 bits (582), Expect = 3e-59
 Identities = 120/212 (56%), Positives = 153/212 (72%), Gaps = 4/212 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            V+HTSIR+LLA V  FDLELEQ+DVKT FLHGELEE+IYM QP+G++    E  VC L+K
Sbjct: 600  VRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKK 659

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQDLEST--YLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD+FM    + R +Y+ C+Y +Q  + T  YLLLYVDD+LIA+RD
Sbjct: 660  SLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRD 719

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
               I ++K  L  EF+MK+LGA +KILG+EI RDR VGKL LSQ+ YI ++L RF+M+  
Sbjct: 720  KSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNC 779

Query: 1826 RPVSTRMADHLPL--DRIAFIKEEKLRLHHLP 1737
            +PVST +A H  L  D     KEE  R+ H+P
Sbjct: 780  KPVSTPLAAHFKLSSDLCPQTKEEMERMSHVP 811


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  228 bits (580), Expect = 4e-59
 Identities = 117/189 (61%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR LL++V   D ELEQMDVKT FLHGELEE IYM+QP+G++  G E  VC L+K
Sbjct: 647  VKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKK 706

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F R  Y++CVY+K  D  + YLLLYVDD+LIAA+D 
Sbjct: 707  SLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLKVVDGSAIYLLLYVDDMLIAAKDK 766

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              IE++K  L  EF+MKDLGA +KILG+EITR+R  GKL LSQ+ YI KVL+RF+M  A+
Sbjct: 767  SEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAK 826

Query: 1823 PVSTRMADH 1797
            PVST +A H
Sbjct: 827  PVSTPLAAH 835


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  225 bits (574), Expect = 9e-58
 Identities = 113/194 (58%), Positives = 144/194 (74%), Gaps = 2/194 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH SIR+LLA+V+ F+LEL+Q+DVKT FLHG LEE+IYMKQP+G++D      VC L+K
Sbjct: 1204 VKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKK 1263

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK--QDLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD FM    F+R +Y+SCVY K   D    YLLLYVDD+LIAA++
Sbjct: 1264 SLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKN 1323

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
               I ++K LL  EF+MKDLGA +KILG+EI RDR  G L +SQ+ YI K+++ FHMD +
Sbjct: 1324 RAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAFHMDHS 1383

Query: 1826 RPVSTRMADHLPLD 1785
            +PVST +A H   D
Sbjct: 1384 KPVSTPLAQHFKFD 1397


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  224 bits (572), Expect = 1e-57
 Identities = 118/192 (61%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            +KH+SIR LL++V   D ELEQMDVKT FLHGELEE IYM+QP+G++  G E  V  L+K
Sbjct: 784  LKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKK 843

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F R  Y+SCVY+K  D  S YLLLYVDD+LIAA+D 
Sbjct: 844  SLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLKVVDGSSIYLLLYVDDMLIAAKDK 903

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              IE++K  L  EF+MKDLGA +KILG+EITR+R  GKL LSQ+ YI KVL+RF+M  A+
Sbjct: 904  SEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAK 963

Query: 1823 PVSTRMADHLPL 1788
            PVST +A H  L
Sbjct: 964  PVSTPLAAHFRL 975


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 530

 Score =  215 bits (547), Expect = 2e-57
 Identities = 110/212 (51%), Positives = 151/212 (71%), Gaps = 4/212 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH +IR+LLA+V+  D++LEQ++VK  FLHG LEE++YM QP G+++ G +  VCLL+K
Sbjct: 282  VKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVCLLKK 341

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQ--DLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD FM   NFVR E+++CVY ++  D    YLLLYVDD+LIAA+ 
Sbjct: 342  SLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAAKS 401

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
               I+ +K +L  EF+MKDLG  +KILG+EI RDR  G L +SQ+ YI K+L+ F M+ +
Sbjct: 402  KTDIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQMENS 461

Query: 1826 RPVSTRMADHLPLD--RIAFIKEEKLRLHHLP 1737
            +PVST +A H  LD   +    EEK  ++ +P
Sbjct: 462  KPVSTPLATHFKLDASTLPSTNEEKEYMNTVP 493


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score =  216 bits (551), Expect = 2e-57
 Identities = 107/194 (55%), Positives = 146/194 (75%), Gaps = 3/194 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            V+HTSIR +L +V  FD++LEQMDV+TTFLHG+LEE +YM QP+G+I  G E  VC L+K
Sbjct: 250  VRHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDLEELVYMVQPEGFIQPGQEHLVCKLRK 309

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK---QDLESTYLLLYVDDILIAAR 2010
            +LYGLKQ  RQWYK FD+++    + RCEY+  VY+K    D    +LLLYVDD+LIAA+
Sbjct: 310  SLYGLKQSPRQWYKCFDSYIIRIGYKRCEYDCFVYVKSLDDDSSFIFLLLYVDDMLIAAK 369

Query: 2009 DMLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDK 1830
             M+ + ++K+LL KEFDMK+L A +KI+G+EI RDR   +L LSQ +Y+ +V +RF+MD 
Sbjct: 370  SMVEVNKLKSLLSKEFDMKELDAAKKIIGMEIHRDRASRRLWLSQYSYVKRVFERFNMDD 429

Query: 1829 ARPVSTRMADHLPL 1788
            A+PVST +A+H  L
Sbjct: 430  AKPVSTPLANHFRL 443


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  224 bits (571), Expect = 3e-57
 Identities = 118/192 (61%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR LL++V   D ELEQMDVKT FLHGELEE IYM+QPKG++  G E  VC L+K
Sbjct: 1112 VKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKK 1171

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F R  Y+SCVY+K  D  + YLLLYVDD+LIAA+D 
Sbjct: 1172 SLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAKDK 1231

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              I ++K  L  EF+MKDLGA +KILG+EITR R   KL LSQ+ YI KVL+RF+M  A+
Sbjct: 1232 SEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAK 1291

Query: 1823 PVSTRMADHLPL 1788
            PVST +A H  L
Sbjct: 1292 PVSTPLAAHFRL 1303


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  223 bits (569), Expect = 4e-57
 Identities = 114/212 (53%), Positives = 153/212 (72%), Gaps = 4/212 (1%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            V+H+SIR+LLA+V  +DLELEQ+DVKT FLHG LEE+IY++QP+G++  G E  VC L+K
Sbjct: 560  VRHSSIRVLLALVALYDLELEQLDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKK 619

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIKQ--DLESTYLLLYVDDILIAARD 2007
            +LYGLKQ  RQWYK FD+FM    + R  Y++CVY ++  D    YLLLYVDD+LIAARD
Sbjct: 620  SLYGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAARD 679

Query: 2006 MLHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKA 1827
               ++++K  L  EFDMKDLG  +KILG+EI RDR  GKL LSQ+ Y++K+L RF M   
Sbjct: 680  KTLVDKLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGMRDC 739

Query: 1826 RPVSTRMADHLPL--DRIAFIKEEKLRLHHLP 1737
            + V+T +A H  L  D+    +EE+ R+ H+P
Sbjct: 740  KAVNTPLAAHFKLSSDQCPQSEEEQRRMSHVP 771


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  223 bits (568), Expect = 4e-57
 Identities = 117/192 (60%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR LL +V   D ELEQM+VKT FLHGELEE IYM+QP+G++  G E  VC L+K
Sbjct: 877  VKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKK 936

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F    Y+SCVY+K  D    YLLLYVDD+LIAA+D 
Sbjct: 937  SLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLKVVDGSVIYLLLYVDDMLIAAKDK 996

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              IE++K  L  EF+MKDLGA +KILG+EITR+R  GKL LSQ+ YI KVL+RF+M  A+
Sbjct: 997  SEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAK 1056

Query: 1823 PVSTRMADHLPL 1788
            PVST +A H  L
Sbjct: 1057 PVSTPLAAHFRL 1068


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
            Group]
 gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1322

 Score =  223 bits (568), Expect = 4e-57
 Identities = 117/195 (60%), Positives = 143/195 (73%), Gaps = 1/195 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR   ++V   DLELEQ+DVKTTFLHGELEE+IYM QP+G+I  G E  VC L++
Sbjct: 895  VKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKR 954

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F R E++SCVYIK  +    YLLLYVDD+LIAA+  
Sbjct: 955  SLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLLYVDDMLIAAKSK 1014

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              I  +K  L  EFDMKDLGA +KILG+EITRDR  G L LSQ++YI KVL+RF+M  A+
Sbjct: 1015 EQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAK 1074

Query: 1823 PVSTRMADHLPLDRI 1779
            PVST +A H  L  +
Sbjct: 1075 PVSTPIAPHFKLSAL 1089


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  221 bits (563), Expect = 2e-56
 Identities = 117/192 (60%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR LL++V   D ELEQMDVKT FLHGELEE IYM+QP+G++  G E  VC L+K
Sbjct: 814  VKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKK 873

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F R  Y+SCVY+K  D  + YLLLYVDD+LIAA+D 
Sbjct: 874  SLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAKDK 933

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              I ++K  L  EF+MKDLGA +KILG+EITR+R  GKL LSQ+ YI KVL RF+M  A+
Sbjct: 934  SEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAK 993

Query: 1823 PVSTRMADHLPL 1788
             VST +A H  L
Sbjct: 994  LVSTLLAAHFRL 1005


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score =  220 bits (561), Expect = 3e-56
 Identities = 116/195 (59%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
 Frame = -3

Query: 2360 VKHTSIRLLLAVVNQFDLELEQMDVKTTFLHGELEEKIYMKQPKGYID*GNEQKVCLLQK 2181
            VKH+SIR   ++V   DLELEQ+DVKT FLHGELEE+IYM QP+G+I  G E  VC L++
Sbjct: 815  VKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKR 874

Query: 2180 TLYGLKQRLRQWYKHFDTFME*ANFVRCEYESCVYIK-QDLESTYLLLYVDDILIAARDM 2004
            +LYGLKQ  RQWYK FD+FM    F R E++SCVYIK  +    YLLLYVDD+LIAA+  
Sbjct: 875  SLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLLYVDDMLIAAKSK 934

Query: 2003 LHIEEIKTLLRKEFDMKDLGATRKILGIEITRDRFVGKLLLSQENYILKVLKRFHMDKAR 1824
              I  +K  L  EFDMKDLGA +KILG+EITRDR  G L LSQ++YI KVL+RF+M  A+
Sbjct: 935  EQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAK 994

Query: 1823 PVSTRMADHLPLDRI 1779
            PVST +A H  L  +
Sbjct: 995  PVSTPIAPHFKLSAL 1009