BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00015771
         (742 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO83306.1| Integrase, catalytic core [Corchorus capsularis]       234   3e-67
gb|OMO63131.1| Integrase, catalytic core [Corchorus capsularis]       233   4e-67
gb|KYP55818.1| Retrovirus-related Pol polyprotein from transposo...   221   2e-62
gb|OMO90284.1| Integrase, catalytic core [Corchorus capsularis]       214   5e-60
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               212   3e-59
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   212   3e-59
gb|KYP77410.1| Retrovirus-related Pol polyprotein from transposo...   202   4e-57
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]     197   4e-54
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     197   5e-54
gb|PNX73744.1| gag-pol polyprotein, partial [Trifolium pratense]      194   6e-54
gb|OMO56344.1| Integrase, catalytic core [Corchorus capsularis]       196   1e-53
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]   190   1e-51
ref|XP_021306833.1| uncharacterized protein LOC110431723 [Sorghu...   184   3e-51
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]   188   8e-51
ref|XP_017241488.1| PREDICTED: retrovirus-related Pol polyprotei...   187   2e-50
ref|XP_017241485.1| PREDICTED: retrovirus-related Pol polyprotei...   187   2e-50
ref|XP_017241484.1| PREDICTED: retrovirus-related Pol polyprotei...   187   2e-50
ref|XP_017241482.1| PREDICTED: retrovirus-related Pol polyprotei...   187   2e-50
gb|PKA53352.1| Retrovirus-related Pol polyprotein from transposo...   186   4e-50
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]   186   5e-50

>gb|OMO83306.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1165

 Score =  234 bits (598), Expect = 3e-67
 Identities = 122/247 (49%), Positives = 160/247 (64%), Gaps = 2/247 (0%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            H A+G  + +S+ G IT ++ P G+  +  VL +PQL +NL+SV  L   G  + FS   
Sbjct: 428  HIANGSSMQVSKVGSITTKSYPLGKFYVPNVLYAPQLSVNLLSVGQLADFGCDIWFSDIF 487

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVA--AFVCASVPSTADLWHRRLGHV 388
            C+VQD  TGK IG GRR   LY L+FL +P+   + A  AFV     S+  LWH RLGHV
Sbjct: 488  CVVQDRHTGKQIGIGRREGGLYVLDFLFVPQIQQNFAMSAFVLDKNSSSFHLWHSRLGHV 547

Query: 387  SNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGP 208
            S+ RL  ++  G+LG V   S+I  C GC +AKF+ALPF  STS S + FDLVHSD+WGP
Sbjct: 548  SSSRLRYMLSVGLLGNVK-YSDISDCKGCILAKFSALPFNKSTSISNAPFDLVHSDVWGP 606

Query: 207  APLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDC 28
            +P+ +  G +YYVSF+DD+SRY WVYL++HRSE    Y  F AM+ TQF  +IK FRSD 
Sbjct: 607  SPVATKGGSVYYVSFVDDYSRYCWVYLMRHRSEFFQIYSKFAAMVKTQFSVKIKVFRSDS 666

Query: 27   AKEYLSS 7
              EY S+
Sbjct: 667  GGEYTST 673


>gb|OMO63131.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1000

 Score =  233 bits (595), Expect = 4e-67
 Identities = 120/246 (48%), Positives = 159/246 (64%), Gaps = 2/246 (0%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TA+G  + IS+ G +T ++ PSG+ ++  +  +PQL  NL+SV  L   G  + FS   C
Sbjct: 311  TANGSLMQISKVGSVTTKSYPSGKFSIPNIFYAPQLSANLLSVGQLADLGCDIWFSDVFC 370

Query: 558  IVQDPQTGKIIGAGRRRHKLYFLEFLHLP--ESICHVAAFVCASVPSTADLWHRRLGHVS 385
            +VQD  TGK IG GRR   LY LEFL +P  +    + AFV     S+  LWH RLGHVS
Sbjct: 371  VVQDRHTGKQIGIGRREGGLYMLEFLFVPPIKQNFVMPAFVLDKNSSSFHLWHSRLGHVS 430

Query: 384  NKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGPA 205
            + RL  +   G+LG V   S+I  C  CK+AKF+ALPF  STS S + FDLVHSD+WGP+
Sbjct: 431  SSRLRYMSSVGLLGNVK-YSDISDCKACKLAKFSALPFNKSTSVSNAAFDLVHSDVWGPS 489

Query: 204  PLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDCA 25
            P+ +  G LYYV F+DD+SRY+W++LL+HRSE    Y  F AM+ TQF ++IK FRSD  
Sbjct: 490  PVATKGGSLYYVLFVDDYSRYSWIFLLRHRSEFFQIYSKFVAMVKTQFSSKIKVFRSDSG 549

Query: 24   KEYLSS 7
             EY S+
Sbjct: 550  GEYTST 555


>gb|KYP55818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1103

 Score =  221 bits (562), Expect = 2e-62
 Identities = 122/249 (48%), Positives = 154/249 (61%), Gaps = 2/249 (0%)
 Frame = -2

Query: 741 HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
           HTADG  + +S  G   P + PS  L++    + P+L  NL+SV  LC  G +++FSST 
Sbjct: 186 HTADGSLMEVSHKG---PISTPS--LSMPDAYLIPKLNFNLVSVGQLCDLGYILTFSSTG 240

Query: 561 CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPES--ICHVAAFVCASVPSTADLWHRRLGHV 388
           C VQDP+TGKIIG GR+  +++ L  LH+P S  +C       AS PS+  LWH+RLGH 
Sbjct: 241 CSVQDPRTGKIIGNGRKIGRMFELTTLHVPSSNNLC------AASTPSSIHLWHQRLGHT 294

Query: 387 SNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGP 208
           S  +L  LI  G LG +        C  C+ AK  ALPF  STS+S SLFDLVH D+WGP
Sbjct: 295 SLSKLRPLISMGSLGSIKEDKL--DCTACQTAKQAALPFNDSTSSSVSLFDLVHYDVWGP 352

Query: 207 APLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDC 28
           AP P+  G  Y++ FIDDFSR+TW+YL+K RSEI   Y  F  MI TQF   IKTFR D 
Sbjct: 353 APTPTMGGCRYFIIFIDDFSRFTWIYLMKSRSEIPQIYINFATMIRTQFSKCIKTFRRDN 412

Query: 27  AKEYLSSTM 1
           A EY  S +
Sbjct: 413 ASEYRDSKL 421


>gb|OMO90284.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1323

 Score =  214 bits (546), Expect = 5e-60
 Identities = 116/254 (45%), Positives = 154/254 (60%), Gaps = 10/254 (3%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            HTA+G  +  +  G ++     S  ++L  VL+ P L +NL+SV  LC  GL V F S  
Sbjct: 364  HTANGSSMFATHIGSVSC----SKNVSLDDVLLVPSLSMNLLSVGQLCDLGLDVIFRSHG 419

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLP--------ESICHVAAFVCASVP--STADL 412
            C+VQD  TG+++G GR+  +L+ LE LH+P         S C   + + A+V   S   L
Sbjct: 420  CVVQDCLTGRVVGTGRKFGRLFVLETLHIPYRLFDQKLNSFCVQKSLLAATVQKLSPFSL 479

Query: 411  WHRRLGHVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDL 232
            WHRRL H+S  RL  L+ SG LG V P ++   C  CK+AK +ALPF  S S S S FDL
Sbjct: 480  WHRRLAHISCSRLQYLVSSGKLGSVKPEAST-FCISCKLAKQSALPFNTSESVSLSPFDL 538

Query: 231  VHSDIWGPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGAR 52
            +HSD+WGP+ LP+  G  YYV F+DDFSRYTW+YL +HRS++   YQ F+ M+ TQF   
Sbjct: 539  IHSDVWGPSRLPTMGGSCYYVIFVDDFSRYTWLYLFRHRSDLLKIYQDFSTMVRTQFSKP 598

Query: 51   IKTFRSDCAKEYLS 10
            IK  R D A EY S
Sbjct: 599  IKRLRVDSAGEYKS 612


>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  212 bits (540), Expect = 3e-59
 Identities = 118/249 (47%), Positives = 155/249 (62%), Gaps = 5/249 (2%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASG-LLVSFSSTA 562
            TADG P+ ++  G +         L+L  V + P+L LNL S+  +C SG  LV FS + 
Sbjct: 372  TADGTPMPLAGVGSVVTL-----HLSLPNVYLIPKLKLNLASIGQICDSGDYLVMFSGSF 426

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPESIC----HVAAFVCASVPSTADLWHRRLG 394
            C VQD Q+ K+IG GRR + LY L+ L +P  +      ++ F  +   S+  LWH RLG
Sbjct: 427  CCVQDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLG 486

Query: 393  HVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIW 214
            HVS+ RL  L  +G LG +  + +I  C GCK+AKF+ALPF  STS S+S FDL+HSD+W
Sbjct: 487  HVSSSRLRFLASTGALGNLK-TCDISDCSGCKLAKFSALPFNRSTSVSSSPFDLIHSDVW 545

Query: 213  GPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRS 34
            GP+P+ +  G  YYVSFIDD +RY WVYL+KHRSE    Y AF A+I TQ  A IK FR 
Sbjct: 546  GPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKHRSEFFEIYAAFRALIKTQHSAVIKCFRC 605

Query: 33   DCAKEYLSS 7
            D   EY S+
Sbjct: 606  DLGGEYTSN 614


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
 gb|ABB47666.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1682

 Score =  212 bits (540), Expect = 3e-59
 Identities = 111/251 (44%), Positives = 152/251 (60%), Gaps = 6/251 (2%)
 Frame = -2

Query: 741 HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
           HTA+G    ++  G I+     S + T+  V + P+L +NLISV  L  +   V F  T+
Sbjct: 214 HTANGTLCKVTHQGSIS-----SPQFTVPNVSLVPKLSMNLISVGQLTDTNCFVGFDDTS 268

Query: 561 CIVQDPQTGKIIGAGRRRHK---LYFLEFLHLPESICHVAAF---VCASVPSTADLWHRR 400
           C VQD  TG +IG G R+ +   LY L+ L LP S  +  +    +C++   +   WH R
Sbjct: 269 CFVQDRHTGAVIGTGHRQKRSCGLYILDSLSLPSSSTNTPSVYSPMCSTACKSFPQWHHR 328

Query: 399 LGHVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSD 220
           LGH+   RL +LI  GVLG V P      C GCK+ K   LP+P+STS S+  FDLVHSD
Sbjct: 329 LGHLCGSRLATLINQGVLGSV-PVDTTFVCKGCKLGKQVQLPYPSSTSRSSRPFDLVHSD 387

Query: 219 IWGPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTF 40
           +WG +P PS  G  YYV F+DD+SRYTW+Y +KHRS++ + YQ+F  MI TQF + I+ F
Sbjct: 388 VWGKSPFPSKGGHNYYVIFVDDYSRYTWIYFMKHRSQLISIYQSFAQMIHTQFSSAIRIF 447

Query: 39  RSDCAKEYLSS 7
           RSD   EY+S+
Sbjct: 448 RSDSGGEYMSN 458


>gb|KYP77410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 672

 Score =  202 bits (514), Expect = 4e-57
 Identities = 117/248 (47%), Positives = 148/248 (59%), Gaps = 1/248 (0%)
 Frame = -2

Query: 741 HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
           HTADG  + +S  G   P + PS  L++    + P+L  NL+SV  LC  G +++FSST 
Sbjct: 192 HTADGSLMEVSHKG---PISIPS--LSMPDAYLIPKLNFNLVSVGQLCDLGYILTFSSTG 246

Query: 561 CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCA-SVPSTADLWHRRLGHVS 385
           C VQDP+TGKIIG GR+  +++ L  LH+P S       +CA S PS+  LWH+ LGH S
Sbjct: 247 CSVQDPRTGKIIGNGRKIGRMFELTTLHVPSS-----NNLCATSTPSSIHLWHQGLGHTS 301

Query: 384 NKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGPA 205
             +L  LI  G LG +        C  C+  K  AL F  S S+S S FDLVHSD+WG A
Sbjct: 302 LSKLRPLISMGSLGSIKEDKL--DCTACQTTKQAALLFNDSISSSISPFDLVHSDVWGSA 359

Query: 204 PLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDCA 25
           P P+  G  Y+V  IDDFSR+TW+YL+K RSEI   Y  F  MI TQF   IKTFR D A
Sbjct: 360 PTPTMGGCRYFVILIDDFSRFTWIYLMKSRSEIPQIYINFATMIRTQFSKCIKTFRRDNA 419

Query: 24  KEYLSSTM 1
            EY  S +
Sbjct: 420 SEYRDSKL 427


>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1204

 Score =  197 bits (502), Expect = 4e-54
 Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 5/249 (2%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            HTADG PL+I   G ++  +      ++  V   P+L + L+S   L   G  V   S +
Sbjct: 389  HTADGTPLAIVGRGTLSISS-----FSVPAVSYVPKLAMQLMSAGQLTDHGCRVILDSDS 443

Query: 561  CIVQDPQTGKIIGAGRRRH---KLYFLEFLHLPESICHVAAFVCASVPSTADL--WHRRL 397
            C VQD +TG ++G G RR    +L+ L++L LP +    A+ + ++  ST     WH RL
Sbjct: 444  CCVQDHRTGLLVGTGPRRRDSQRLWELDWLRLPSAA--PASLLASTASSTVSFAQWHHRL 501

Query: 396  GHVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDI 217
            GH+   RL +L++ G+LG VS + ++  C GCK+ K   LP+ +S S S   FDLVHSD+
Sbjct: 502  GHLCGSRLSALVRRGLLGSVSGAVSLNQCQGCKLGKQIQLPYHSSESVSKRPFDLVHSDV 561

Query: 216  WGPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFR 37
            WGPAP  S  G  YY+ FIDDFSR+TW+Y + HRSE+ A Y++F  MI T F + I+ FR
Sbjct: 562  WGPAPFVSKGGHRYYIIFIDDFSRHTWIYFMTHRSEVLAIYKSFARMIRTHFDSPIRVFR 621

Query: 36   SDCAKEYLS 10
            +D A EYLS
Sbjct: 622  ADSAGEYLS 630


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  197 bits (501), Expect = 5e-54
 Identities = 113/260 (43%), Positives = 145/260 (55%), Gaps = 16/260 (6%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TADG  L +S  G +  +       T+  V   P L + LISV  L      V F   AC
Sbjct: 518  TADGTILPVSLQGTLQTK-----EYTIPDVFYVPNLSMKLISVGQLTDMKCHVVFDEAAC 572

Query: 558  IVQDPQTGKIIGAGRRRHK---LYFLEFLHLPESICH-------------VAAFVCASVP 427
             V D  TG ++GAG R +    LY L+ LHLP S                  + V +S+ 
Sbjct: 573  YVLDRATGNLVGAGHRLNGPRGLYVLDHLHLPTSTSSGFPGNSASATSITSNSSVYSSLS 632

Query: 426  STADLWHRRLGHVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSAST 247
            ++   WH RLGH+   RL +L+Q GVLG VS  ++   C GCK+ K   LP+ +S S ST
Sbjct: 633  ASFPQWHHRLGHLCGSRLSTLVQQGVLGNVSIETDFV-CKGCKLGKQVQLPYRSSMSRST 691

Query: 246  SLFDLVHSDIWGPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFT 67
            S F LVHSD+WGPAP  S  G  YYV F+DDFSRYTW+Y +KHRSE+   Y++F +M+ T
Sbjct: 692  SPFALVHSDVWGPAPFHSKGGHRYYVIFVDDFSRYTWIYFMKHRSELYQVYKSFASMVHT 751

Query: 66   QFGARIKTFRSDCAKEYLSS 7
            QF   IK FRSD   EYLS+
Sbjct: 752  QFSTSIKNFRSDSGGEYLSN 771


>gb|PNX73744.1| gag-pol polyprotein, partial [Trifolium pratense]
          Length = 737

 Score =  194 bits (494), Expect = 6e-54
 Identities = 110/247 (44%), Positives = 145/247 (58%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            HTADG  + ++  G I+        L+L    + P+L  NLISV  LC  G  ++FSS+ 
Sbjct: 378  HTADGSLMPVTHKGSIS-----LSNLSLPDTYLIPKLSFNLISVGQLCDLGYELTFSSSG 432

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSN 382
            C VQDP+TG++IG G +  +L+ L  LH+P+    V     AS  S+  LWH RL H S 
Sbjct: 433  CRVQDPRTGQLIGTGCKTGRLFELTKLHVPQ----VPNICAASKDSSIRLWHCRLAHSSI 488

Query: 381  KRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGPAP 202
             ++  L+  G LG V+  S    C  C+ AK  AL F  STS S S FDLVHSDIWGPAP
Sbjct: 489  GKMRHLVSQGHLGSVANESL--ECTSCQTAKQPALSFNKSTSISISSFDLVHSDIWGPAP 546

Query: 201  LPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDCAK 22
             PS  G  Y+V F+DD+SR+TW++++K+R E+   Y  F  MI TQF   IK FR D A 
Sbjct: 547  TPSMGGSRYFVIFVDDYSRFTWIFMMKNRHELPQIYINFAKMIKTQFSKTIKVFRRDNAM 606

Query: 21   EYLSSTM 1
            EY  S +
Sbjct: 607  EYRDSKL 613


>gb|OMO56344.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1095

 Score =  196 bits (498), Expect = 1e-53
 Identities = 105/244 (43%), Positives = 141/244 (57%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TA+G  + IS+ G +T ++ PSG+ ++  +  +PQL  NL+SV  L   G  + FS   C
Sbjct: 390  TANGPLMQISKVGSVTTKSYPSGKFSIPNIFYAPQLSANLLSVGQLADLGCDIWFSDVFC 449

Query: 558  IVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSNK 379
            +VQD  TGK IG GRR                     F+C               HVS+ 
Sbjct: 450  VVQDRHTGKQIGIGRRE------------------GVFIC---------------HVSSS 476

Query: 378  RLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGPAPL 199
            RL  +   G+LG V   S+I  C  CK+AKF+ALPF  STS S + FDLVHSD+WGP+P+
Sbjct: 477  RLRYMSSVGLLGNVK-YSDISDCKACKLAKFSALPFNKSTSVSNAAFDLVHSDVWGPSPV 535

Query: 198  PSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDCAKE 19
             +  G LYYV F+DD+SRY+W++LL+HRSE    Y  F AM+ TQF ++IK FRSD   E
Sbjct: 536  ATKGGSLYYVLFVDDYSRYSWIFLLRHRSEFFQIYSKFVAMVKTQFSSKIKVFRSDSGGE 595

Query: 18   YLSS 7
            Y S+
Sbjct: 596  YTST 599


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score =  190 bits (483), Expect = 1e-51
 Identities = 107/246 (43%), Positives = 147/246 (59%), Gaps = 4/246 (1%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            H ADG  +  +  G+++  T     L++  V   P L  NL SV  L   G  + F  + 
Sbjct: 368  HIADGSTMHGNSLGFVSTST-----LSVPGVFHVPDLSYNLCSVGQLAELGYRLIFXYSG 422

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPE----SICHVAAFVCASVPSTADLWHRRLG 394
            CIVQDP+TG+ +G G R  +++ +  LHLP     S+    A V +S+PS A LWH RLG
Sbjct: 423  CIVQDPRTGQELGTGPRVGRMFPVNNLHLPPVAPVSVAAATAAV-SSLPSLA-LWHSRLG 480

Query: 393  HVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIW 214
            H  + R+  L+  G+LG VS  +    C  C++ K  ALPF  S S S S+F+L+HSD+W
Sbjct: 481  HAPSSRVQQLVSRGLLGSVSKDNF--DCTSCQLGKQPALPFNNSDSISKSIFELIHSDVW 538

Query: 213  GPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRS 34
            GP+P+ S  G  Y+V FIDD+SRY+W++ +K RSEI + Y  F  M+ TQF  RIKTFRS
Sbjct: 539  GPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRS 598

Query: 33   DCAKEY 16
            D A EY
Sbjct: 599  DNALEY 604


>ref|XP_021306833.1| uncharacterized protein LOC110431723 [Sorghum bicolor]
          Length = 564

 Score =  184 bits (468), Expect = 3e-51
 Identities = 99/218 (45%), Positives = 128/218 (58%), Gaps = 5/218 (2%)
 Frame = -2

Query: 648 LVSPQLCLNLISVSSLCASGLLVSFSSTACIVQDPQTGKIIGAGRRRH---KLYFLEFLH 478
           L+  Q   +L+    L    LL       C++QD ++G++IG G RR     LY L+ L 
Sbjct: 171 LLEVQEVQDLLDQFLLLLHHLLQLLRRLGCLIQDRRSGQVIGTGHRRKGASSLYVLDTLR 230

Query: 477 LPESICHVAAFVCASVPSTADL--WHRRLGHVSNKRLVSLIQSGVLGRVSPSSNIESCFG 304
           LP S+   A+   A++ S +    WH RLGH+   RL SLI  G LG  S  S+   C G
Sbjct: 231 LPSSVGSPASVSSAALSSASSFAKWHHRLGHLCGSRLSSLINQGCLGPTSIESSFH-CKG 289

Query: 303 CKMAKFTALPFPASTSASTSLFDLVHSDIWGPAPLPSSSGFLYYVSFIDDFSRYTWVYLL 124
           CK+ K   LP+ +S S+S   FDL+HSD+WGPAP  S  G  YYV FIDD SRYTWVY +
Sbjct: 290 CKLGKQIQLPYLSSASSSARPFDLIHSDVWGPAPFASKGGHKYYVIFIDDHSRYTWVYFM 349

Query: 123 KHRSEISAAYQAFTAMIFTQFGARIKTFRSDCAKEYLS 10
           KHRS++ + YQ+F  M+ TQF   IK FRSD   EYLS
Sbjct: 350 KHRSQLCSIYQSFVRMVHTQFSTPIKVFRSDSGGEYLS 387


>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
          Length = 1287

 Score =  188 bits (477), Expect = 8e-51
 Identities = 110/246 (44%), Positives = 149/246 (60%), Gaps = 4/246 (1%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            H ADG  +  +  G+++     +  L++  V   P L  NL SV  L   G  + F  + 
Sbjct: 343  HIADGSTMHGNCLGFVS-----TSNLSVPGVFHVPDLSYNLFSVGXLAELGYHLIFYYSG 397

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPE----SICHVAAFVCASVPSTADLWHRRLG 394
            CIVQDP+TG+ +  G R  +++ +  LHLP     SI   AA V +S+PS A LWH RLG
Sbjct: 398  CIVQDPRTGQELXTGPRVGRMFPVINLHLPPVAPVSIATAAAAV-SSLPSFA-LWHSRLG 455

Query: 393  HVSNKRLVSLIQSGVLGRVSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIW 214
            H S+ R+  L+  G+LG VS   +I  C  C++ K  ALPF  S S S S+F+L+HSD+W
Sbjct: 456  HASSSRVQQLVSRGLLGSVS--KDIFYCTSCQIGKQPALPFNNSESISHSIFELIHSDVW 513

Query: 213  GPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRS 34
            GP+P+ S  G  Y+V FIDD+SRY+W++ +K RSEI + Y  F  MI TQF  RIKTFRS
Sbjct: 514  GPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMIETQFSKRIKTFRS 573

Query: 33   DCAKEY 16
            D A EY
Sbjct: 574  DNALEY 579


>ref|XP_017241488.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X7 [Daucus carota subsp. sativus]
          Length = 1009

 Score =  187 bits (474), Expect = 2e-50
 Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 3/247 (1%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TADG  L I+  G I+         +L  V VSP+L  NLISV  L  +   V FS++ C
Sbjct: 504  TADGNSLPITAVGDIST--------SLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGC 555

Query: 558  IVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSNK 379
             VQD  +GK+I  G +  +L+ L  L  P  + +  +  C +V     +WH+RLGH ++ 
Sbjct: 556  FVQDQVSGKMIAKGPKVGRLFPL--LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSH 611

Query: 378  RLVSLIQSGVLG-RVSPSSNIES--CFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGP 208
             L  L++SG+LG +VS SSN ++  C  CK+ K   LPFP+  S +T  F+LVH+D+WG 
Sbjct: 612  VLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGI 671

Query: 207  APLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDC 28
            +P+ S   + Y+V+FIDDFSRYTWVY L+++SE+  A+Q F A+I TQF A+I+  +SD 
Sbjct: 672  SPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDS 731

Query: 27   AKEYLSS 7
              EY S+
Sbjct: 732  GGEYTSN 738


>ref|XP_017241485.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X4 [Daucus carota subsp. sativus]
          Length = 1575

 Score =  187 bits (474), Expect = 2e-50
 Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 3/247 (1%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TADG  L I+  G I+         +L  V VSP+L  NLISV  L  +   V FS++ C
Sbjct: 504  TADGNSLPITAVGDIST--------SLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGC 555

Query: 558  IVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSNK 379
             VQD  +GK+I  G +  +L+ L  L  P  + +  +  C +V     +WH+RLGH ++ 
Sbjct: 556  FVQDQVSGKMIAKGPKVGRLFPL--LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSH 611

Query: 378  RLVSLIQSGVLG-RVSPSSNIES--CFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGP 208
             L  L++SG+LG +VS SSN ++  C  CK+ K   LPFP+  S +T  F+LVH+D+WG 
Sbjct: 612  VLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGI 671

Query: 207  APLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDC 28
            +P+ S   + Y+V+FIDDFSRYTWVY L+++SE+  A+Q F A+I TQF A+I+  +SD 
Sbjct: 672  SPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDS 731

Query: 27   AKEYLSS 7
              EY S+
Sbjct: 732  GGEYTSN 738


>ref|XP_017241484.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X3 [Daucus carota subsp. sativus]
          Length = 1612

 Score =  187 bits (474), Expect = 2e-50
 Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 3/247 (1%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TADG  L I+  G I+         +L  V VSP+L  NLISV  L  +   V FS++ C
Sbjct: 504  TADGNSLPITAVGDIST--------SLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGC 555

Query: 558  IVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSNK 379
             VQD  +GK+I  G +  +L+ L  L  P  + +  +  C +V     +WH+RLGH ++ 
Sbjct: 556  FVQDQVSGKMIAKGPKVGRLFPL--LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSH 611

Query: 378  RLVSLIQSGVLG-RVSPSSNIES--CFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGP 208
             L  L++SG+LG +VS SSN ++  C  CK+ K   LPFP+  S +T  F+LVH+D+WG 
Sbjct: 612  VLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGI 671

Query: 207  APLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDC 28
            +P+ S   + Y+V+FIDDFSRYTWVY L+++SE+  A+Q F A+I TQF A+I+  +SD 
Sbjct: 672  SPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDS 731

Query: 27   AKEYLSS 7
              EY S+
Sbjct: 732  GGEYTSN 738


>ref|XP_017241482.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X1 [Daucus carota subsp. sativus]
          Length = 2409

 Score =  187 bits (474), Expect = 2e-50
 Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 3/247 (1%)
 Frame = -2

Query: 738  TADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTAC 559
            TADG  L I+  G I+         +L  V VSP+L  NLISV  L  +   V FS++ C
Sbjct: 504  TADGNSLPITAVGDIST--------SLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGC 555

Query: 558  IVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSNK 379
             VQD  +GK+I  G +  +L+ L  L  P  + +  +  C +V     +WH+RLGH ++ 
Sbjct: 556  FVQDQVSGKMIAKGPKVGRLFPL--LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSH 611

Query: 378  RLVSLIQSGVLG-RVSPSSNIES--CFGCKMAKFTALPFPASTSASTSLFDLVHSDIWGP 208
             L  L++SG+LG +VS SSN ++  C  CK+ K   LPFP+  S +T  F+LVH+D+WG 
Sbjct: 612  VLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGI 671

Query: 207  APLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSDC 28
            +P+ S   + Y+V+FIDDFSRYTWVY L+++SE+  A+Q F A+I TQF A+I+  +SD 
Sbjct: 672  SPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDS 731

Query: 27   AKEYLSS 7
              EY S+
Sbjct: 732  GGEYTSN 738


>gb|PKA53352.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 1203

 Score =  186 bits (472), Expect = 4e-50
 Identities = 101/248 (40%), Positives = 151/248 (60%), Gaps = 3/248 (1%)
 Frame = -2

Query: 741 HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
           HTADG  L I+  G I+         +L  V VSP+L  NLISV  L  +   V FS++ 
Sbjct: 204 HTADGNSLPITAVGDIST--------SLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSG 255

Query: 561 CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPESICHVAAFVCASVPSTADLWHRRLGHVSN 382
           C+VQD  +GK+I  G +  +L+ L  L  P S+ +  A  C +V     +WHRRLGH ++
Sbjct: 256 CLVQDQVSGKMIAKGPKVGRLFPL--LLSPSSMSNYVA--CNAVQCDNQVWHRRLGHPNS 311

Query: 381 KRLVSLIQSGVLGR---VSPSSNIESCFGCKMAKFTALPFPASTSASTSLFDLVHSDIWG 211
             L  L++SG+LG     S ++++  C  CK+ K   LPFP   + +T  F+LVH+D+WG
Sbjct: 312 HVLRVLLKSGLLGNKNSTSSNNDVADCASCKLGKSKTLPFPLHKTRTTKPFELVHTDVWG 371

Query: 210 PAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGARIKTFRSD 31
            AP+ S   + Y+V+FIDDF+R+TWVY L+ +SE+ + ++ F A++ TQF A+IK  +SD
Sbjct: 372 IAPVISHEHYKYFVTFIDDFTRFTWVYFLRSKSEVFSVFKVFLALVETQFSAKIKILQSD 431

Query: 30  CAKEYLSS 7
              EY+S+
Sbjct: 432 SGGEYMSN 439


>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
          Length = 1381

 Score =  186 bits (471), Expect = 5e-50
 Identities = 107/252 (42%), Positives = 147/252 (58%), Gaps = 10/252 (3%)
 Frame = -2

Query: 741  HTADGQPLSISQCGYITPRTDPSGRLTLGPVLVSPQLCLNLISVSSLCASGLLVSFSSTA 562
            H ADG  +  +  G+++  T     L++  V   P L  NL SV  L   G  + F  + 
Sbjct: 368  HIADGSTMHGNSLGFVSTST-----LSVPGVFHVPDLSYNLCSVGQLAELGYRLIFXYSG 422

Query: 561  CIVQDPQTGKIIGAGRRRHKLYFLEFLHLPE----SICHVAAFVCASVPSTADLWHRRLG 394
            CIVQD +TG+ +G G R  +++ +  LHLP     S+    A V +S+PS A LWH RLG
Sbjct: 423  CIVQDXRTGQELGTGPRVGRMFPVNNLHLPPVAPVSVAAATAAV-SSLPSLA-LWHSRLG 480

Query: 393  HVSNKRLVSLIQSGVLGRVSP------SSNIESCFGCKMAKFTALPFPASTSASTSLFDL 232
            H  + R+  L+  G+LG VS       S +   C  C++ K  ALPF  S S S S+F+L
Sbjct: 481  HAPSSRVQQLVSRGLLGSVSRGLLGSVSKDNFDCTSCQLGKQPALPFNNSDSISKSIFEL 540

Query: 231  VHSDIWGPAPLPSSSGFLYYVSFIDDFSRYTWVYLLKHRSEISAAYQAFTAMIFTQFGAR 52
            +HSD+WGP+P+ S  G  Y+V FIDD+SRY+W++ +K RSEI + Y  F  M+ TQF  R
Sbjct: 541  IHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKR 600

Query: 51   IKTFRSDCAKEY 16
            IKTFRSD A EY
Sbjct: 601  IKTFRSDNALEY 612