BLASTX nr result

ID: Ophiopogon22_contig00013602 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00013602
         (866 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77197.1| uncharacterized protein A4U43_C02F4090 [Asparagus...   192   9e-52

>gb|ONK77197.1| uncharacterized protein A4U43_C02F4090 [Asparagus officinalis]
          Length = 1860

 Score =  192 bits (489), Expect = 9e-52
 Identities = 128/289 (44%), Positives = 160/289 (55%), Gaps = 5/289 (1%)
 Frame = +2

Query: 2    GEATFTVTVNSGEQEEPIREAEGCLDGSVSPNFHELSPEICPTVVQPVVTASEISTGDVK 181
            G+  FT+T   GEQE+P  EAE CLDGS+SPN +E S +I P +  P V  S+I + D+ 
Sbjct: 714  GKLAFTLTATIGEQEDPTGEAEPCLDGSISPNIYESSTDIGPAIAHPDVLTSDIVSDDLT 773

Query: 182  SSCEAPRDSDSILLHTDGLEFNEPIIESRIXXXXXXXXXXXIHGTINSAEDVAPVVSEDM 361
            +S E  R+ D  L H D + F  P ++SRI           I  T NS EDV P  SED 
Sbjct: 774  NSHEVSRNLDGKLPHRDDMGFAGPTLDSRI-MSDDSFPSSDICETDNSTEDVEPAPSEDT 832

Query: 362  EHIQGKTISDEVPVFSEDMEDVQGKTISDEVPIGHIEDPLVSTVQPGTPQDPMEADNKSY 541
              IQGKTI D         EDV          +GH++D  VSTVQ G  QD    DN + 
Sbjct: 833  AAIQGKTIYD---------EDV----------MGHVKDQSVSTVQLGPSQDSRVRDNGTS 873

Query: 542  SHKNRFGPYPALSLSNGQCTMQP-----GVWNITAGGEDTTAEGMEARETPLANIVPLEL 706
             H+N     PA SLSN Q   +P     GV +I AG EDTT EGME RET  + IVP E+
Sbjct: 874  YHENISTSDPASSLSNSQSIEEPDVFPKGVQSIAAGVEDTTVEGMEERETSESIIVPHEI 933

Query: 707  EHFFDAEEPQESHEVDSPKIVTMFSGKEKILDNMLLQSNSSTEDLGKSN 853
            E F DAEE QES EV+S ++ T+ SG +    +  L +N STED  K+N
Sbjct: 934  ECFSDAEESQESCEVNSAELFTVSSGND---TSAQLTTNFSTEDASKTN 979


Top