BLASTX nr result

ID: Ophiopogon22_contig00012609 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00012609
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK64329.1| uncharacterized protein A4U43_C07F24550 [Asparagu...    83   9e-17
ref|XP_021903642.1| RNA-binding protein 39 isoform X1 [Carica pa...    61   8e-08
ref|XP_010935165.1| PREDICTED: RNA-binding protein 39 [Elaeis gu...    57   2e-06
ref|XP_008806138.1| PREDICTED: RNA-binding protein 39-like [Phoe...    56   6e-06
ref|XP_023894346.1| uncharacterized protein LOC112006296, partia...    55   8e-06

>gb|ONK64329.1| uncharacterized protein A4U43_C07F24550 [Asparagus officinalis]
          Length = 173

 Score = 82.8 bits (203), Expect = 9e-17
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +3

Query: 105 MDFDEYEYLEKTVENPDLPSRERDSANRNGVESEKERSQSSKHGTEESE 251
           MDFDEYEYLEKTVENPDLPS+E+DSAN NGV+ EKER++ S+H  EESE
Sbjct: 1   MDFDEYEYLEKTVENPDLPSKEKDSANGNGVKPEKERTRRSRHKDEESE 49


>ref|XP_021903642.1| RNA-binding protein 39 isoform X1 [Carica papaya]
          Length = 602

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = +3

Query: 105 MDFDEYEYLEKTVENPDLPSRERDSANRNG---VESEKERSQSSKHGTEE 245
           MDFDEYEYLEKTVENPD P + +++AN  G      EKERS++SKHG +E
Sbjct: 1   MDFDEYEYLEKTVENPD-PQKGKETANGGGGTVKSEEKERSRNSKHGRDE 49


>ref|XP_010935165.1| PREDICTED: RNA-binding protein 39 [Elaeis guineensis]
          Length = 572

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = +3

Query: 105 MDFDEYEYLEKTVENPDLPSRERDSANRNGVESEKERSQSSKHGTEESE 251
           MDFDEYEYLEKTVEN ++P +E++  + NG    K+RS+SSKH +EE++
Sbjct: 1   MDFDEYEYLEKTVENAEVP-KEKEGVSGNG--EAKDRSRSSKHRSEEAD 46


>ref|XP_008806138.1| PREDICTED: RNA-binding protein 39-like [Phoenix dactylifera]
 ref|XP_008806139.1| PREDICTED: RNA-binding protein 39-like [Phoenix dactylifera]
          Length = 580

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +3

Query: 105 MDFDEYEYLEKTVENPDLPSRERDSANRNGVESEKERSQSSKHGTEESE 251
           MDFDEYEYLEKTVEN + P +E++  + NG   EK+R +SSKH +EE++
Sbjct: 1   MDFDEYEYLEKTVENAEAP-KEKEWVSGNG--EEKDRGRSSKHRSEEAD 46


>ref|XP_023894346.1| uncharacterized protein LOC112006296, partial [Quercus suber]
          Length = 471

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
 Frame = +3

Query: 105 MDFDEYEYLEKTVENPDLPSRERDSANRNGVESE----KERSQSSKHGTEESE 251
           MDFD Y+YLEKTVENP+ P +E++ A   G E E    KERS+SSKH ++E +
Sbjct: 1   MDFDAYDYLEKTVENPE-PGKEKEGAVNGGGEIEKSGNKERSRSSKHKSDERD 52


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