BLASTX nr result

ID: Ophiopogon22_contig00012482 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00012482
         (357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63795.1| uncharacterized protein A4U43_C07F19020 [Asparagu...    54   5e-06
ref|XP_020275521.1| mediator of RNA polymerase II transcription ...    54   5e-06

>gb|ONK63795.1| uncharacterized protein A4U43_C07F19020 [Asparagus officinalis]
          Length = 1267

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
 Frame = -3

Query: 355 NQMQSTQASLMQMSSCLQHNQSNIXXXXXXXXXXXXXXXXXXXXXXXXXQSVPSLLQ-NP 179
           +Q+QS+Q  +MQMSS LQ NQ+NI                          SVPSL+Q NP
Sbjct: 207 SQLQSSQP-MMQMSSSLQSNQANIQQTQATNSQSAPQPGLQQNQLNQIQSSVPSLIQQNP 265

Query: 178 -SISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMGQQGNVSNMQQNQLLGRQNNM 2
            S++R                                +M QQGN+SNMQQNQLLG+QN++
Sbjct: 266 QSVARQQQAQPSHQQASSLQQQSASMSQQSTLSQQQQMMSQQGNMSNMQQNQLLGQQNSI 325


>ref|XP_020275521.1| mediator of RNA polymerase II transcription subunit 15a [Asparagus
           officinalis]
          Length = 1306

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
 Frame = -3

Query: 355 NQMQSTQASLMQMSSCLQHNQSNIXXXXXXXXXXXXXXXXXXXXXXXXXQSVPSLLQ-NP 179
           +Q+QS+Q  +MQMSS LQ NQ+NI                          SVPSL+Q NP
Sbjct: 246 SQLQSSQP-MMQMSSSLQSNQANIQQTQATNSQSAPQPGLQQNQLNQIQSSVPSLIQQNP 304

Query: 178 -SISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMGQQGNVSNMQQNQLLGRQNNM 2
            S++R                                +M QQGN+SNMQQNQLLG+QN++
Sbjct: 305 QSVARQQQAQPSHQQASSLQQQSASMSQQSTLSQQQQMMSQQGNMSNMQQNQLLGQQNSI 364


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