BLASTX nr result
ID: Ophiopogon22_contig00012482
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon22_contig00012482 (357 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ONK63795.1| uncharacterized protein A4U43_C07F19020 [Asparagu... 54 5e-06 ref|XP_020275521.1| mediator of RNA polymerase II transcription ... 54 5e-06 >gb|ONK63795.1| uncharacterized protein A4U43_C07F19020 [Asparagus officinalis] Length = 1267 Score = 54.3 bits (129), Expect = 5e-06 Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Frame = -3 Query: 355 NQMQSTQASLMQMSSCLQHNQSNIXXXXXXXXXXXXXXXXXXXXXXXXXQSVPSLLQ-NP 179 +Q+QS+Q +MQMSS LQ NQ+NI SVPSL+Q NP Sbjct: 207 SQLQSSQP-MMQMSSSLQSNQANIQQTQATNSQSAPQPGLQQNQLNQIQSSVPSLIQQNP 265 Query: 178 -SISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMGQQGNVSNMQQNQLLGRQNNM 2 S++R +M QQGN+SNMQQNQLLG+QN++ Sbjct: 266 QSVARQQQAQPSHQQASSLQQQSASMSQQSTLSQQQQMMSQQGNMSNMQQNQLLGQQNSI 325 >ref|XP_020275521.1| mediator of RNA polymerase II transcription subunit 15a [Asparagus officinalis] Length = 1306 Score = 54.3 bits (129), Expect = 5e-06 Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Frame = -3 Query: 355 NQMQSTQASLMQMSSCLQHNQSNIXXXXXXXXXXXXXXXXXXXXXXXXXQSVPSLLQ-NP 179 +Q+QS+Q +MQMSS LQ NQ+NI SVPSL+Q NP Sbjct: 246 SQLQSSQP-MMQMSSSLQSNQANIQQTQATNSQSAPQPGLQQNQLNQIQSSVPSLIQQNP 304 Query: 178 -SISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMGQQGNVSNMQQNQLLGRQNNM 2 S++R +M QQGN+SNMQQNQLLG+QN++ Sbjct: 305 QSVARQQQAQPSHQQASSLQQQSASMSQQSTLSQQQQMMSQQGNMSNMQQNQLLGQQNSI 364