BLASTX nr result

ID: Ophiopogon22_contig00008860 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00008860
         (505 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020262369.1| YTH domain-containing protein 1-like [Aspara...    71   1e-12
gb|ONK71446.1| uncharacterized protein A4U43_C04F8650 [Asparagus...    71   3e-11
gb|ONK71454.1| uncharacterized protein A4U43_C04F8830 [Asparagus...    58   7e-07

>ref|XP_020262369.1| YTH domain-containing protein 1-like [Asparagus officinalis]
          Length = 131

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 33/53 (62%), Positives = 40/53 (75%)
 Frame = -1

Query: 505 EPIEEDPGEDKLQEVDSCEERNKDSCRRNEENLCVQQLDEVASCEVDQNEEDS 347
           E +EED  ED+ QEVDSCEE  +DSCR +EE LC Q++DEV SCEVD +  DS
Sbjct: 60  EEVEEDLDEDEAQEVDSCEEPYEDSCRADEEKLCEQEIDEVPSCEVDPDSFDS 112


>gb|ONK71446.1| uncharacterized protein A4U43_C04F8650 [Asparagus officinalis]
          Length = 810

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 505 EPIEEDPGEDKLQEVDSCEERN-KDSCRRNEENLCVQQLDEVASCEVDQNEEDSFEEPNE 329
           E  EEDP ED+ QEVDS  E N +DSC   EENL  Q+LDE ASCEV+ +EE   EEP  
Sbjct: 37  EEDEEDPDEDEPQEVDSNAEANDEDSCGAKEENLIEQELDEAASCEVEPDEE-LVEEP-- 93

Query: 328 DVSLEEEPDEVNSCGSQREDAC 263
               EEEPDE    G   ++AC
Sbjct: 94  ---CEEEPDEEPCEGEPDDEAC 112


>gb|ONK71454.1| uncharacterized protein A4U43_C04F8830 [Asparagus officinalis]
          Length = 294

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
 Frame = -1

Query: 505 EPIEEDPGEDKLQEVDSCEERNKDSCRRNEENLCVQQLDE--------VASCEVDQNEED 350
           E +EED  ED+ QEVDSCEE  +DSCR +EE L   + ++        + SC   +NEE 
Sbjct: 62  EEVEEDLDEDEAQEVDSCEEPYEDSCRADEEKLSQGEPNQADSCGGLSIKSCTEKRNEET 121

Query: 349 SFEEPNEDVSLEE 311
             EEP E+  +EE
Sbjct: 122 YEEEPYEEEMIEE 134


Top