BLASTX nr result
ID: Ophiopogon22_contig00007768
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00007768
(403 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020261235.1| heterogeneous nuclear ribonucleoprotein Q-li... 78 9e-20
ref|XP_008812339.1| PREDICTED: heterogeneous nuclear ribonucleop... 71 5e-18
ref|XP_010933278.1| PREDICTED: heterogeneous nuclear ribonucleop... 73 7e-17
ref|XP_010943899.1| PREDICTED: nucleolin-like [Elaeis guineensis... 68 4e-16
ref|XP_008802868.1| PREDICTED: nucleolin-like [Phoenix dactylifera] 71 2e-15
gb|PKA48096.1| Polyadenylate-binding protein 5 [Apostasia shenzh... 68 3e-15
ref|XP_020674592.1| heterogeneous nuclear ribonucleoprotein R-li... 54 3e-11
ref|XP_020095721.1| nucleolin-like isoform X1 [Ananas comosus] >... 48 5e-11
ref|XP_020095723.1| heterogeneous nuclear ribonucleoprotein Q-li... 48 5e-11
ref|XP_020582085.1| nucleolin-like [Phalaenopsis equestris] 50 9e-11
ref|XP_009390670.1| PREDICTED: heterogeneous nuclear ribonucleop... 48 2e-10
ref|XP_009390662.1| PREDICTED: heterogeneous nuclear ribonucleop... 48 8e-09
gb|OVA12858.1| RNA recognition motif domain [Macleaya cordata] 48 6e-08
>ref|XP_020261235.1| heterogeneous nuclear ribonucleoprotein Q-like [Asparagus
officinalis]
gb|ONK72154.1| uncharacterized protein A4U43_C04F16350 [Asparagus officinalis]
Length = 557
Score = 78.2 bits (191), Expect(2) = 9e-20
Identities = 37/59 (62%), Positives = 39/59 (66%)
Frame = -1
Query: 403 ARGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
ARGGRRI TSA R FP +RQPFPPE D GPFGPRH +ED YFYG GQG
Sbjct: 423 ARGGRRIPTSARRGGFDRGRGRAFPIQRQPFPPEQDFGGPFGPRHIAEDPYFYGGGGQG 481
Score = 46.2 bits (108), Expect(2) = 9e-20
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
R+RPRYD+PDPM G RYRDSLGM
Sbjct: 501 RMRPRYDHPDPMIGRARYRDSLGM 524
>ref|XP_008812339.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Phoenix
dactylifera]
Length = 746
Score = 71.2 bits (173), Expect(2) = 5e-18
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
RGG R+STSA R FPSRR P+ PE++ GPFG RH ED YFYGDVG G
Sbjct: 613 RGGGRVSTSARHGAFDRGRGRAFPSRRPPYLPEEEFGGPFGSRHLGEDPYFYGDVGHG 670
Score = 47.4 bits (111), Expect(2) = 5e-18
Identities = 18/24 (75%), Positives = 23/24 (95%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
RIRPR+D+PDP+ GG+RYRDSLG+
Sbjct: 690 RIRPRFDHPDPLAGGSRYRDSLGL 713
>ref|XP_010933278.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Elaeis
guineensis]
ref|XP_019709278.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Elaeis
guineensis]
Length = 749
Score = 72.8 bits (177), Expect(2) = 7e-17
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
RGGR +STSA R FPSRR P+PP+++ PFG RHF ED YFYGDVG G
Sbjct: 616 RGGRAVSTSARHGAFDRGRGRAFPSRRLPYPPKEEFGRPFGARHFGEDPYFYGDVGHG 673
Score = 42.0 bits (97), Expect(2) = 7e-17
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
RIRPR+D+PDP+ G + Y+DSLGM
Sbjct: 693 RIRPRFDHPDPLAGRSHYQDSLGM 716
>ref|XP_010943899.1| PREDICTED: nucleolin-like [Elaeis guineensis]
ref|XP_010943900.1| PREDICTED: nucleolin-like [Elaeis guineensis]
Length = 767
Score = 67.8 bits (164), Expect(2) = 4e-16
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
RGG RISTSA R FPSRR P+ PE++ PFG RH ED YFYG+VG G
Sbjct: 634 RGGGRISTSARHGAFDRGRGRAFPSRRPPYRPEEEFGAPFGARHLGEDPYFYGNVGHG 691
Score = 44.3 bits (103), Expect(2) = 4e-16
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
RIRPR+D+PD + GG+RYRDSLG+
Sbjct: 711 RIRPRFDHPDQLAGGSRYRDSLGL 734
>ref|XP_008802868.1| PREDICTED: nucleolin-like [Phoenix dactylifera]
Length = 755
Score = 71.2 bits (173), Expect(2) = 2e-15
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
RGGR +STSA R FPSRR P+ PE++ GPFG RH ED YFYGDVG G
Sbjct: 622 RGGRGVSTSARHGAFDRGRGRAFPSRRPPYLPEEEFGGPFGARHLGEDPYFYGDVGHG 679
Score = 38.5 bits (88), Expect(2) = 2e-15
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
RIRP +D+P+P+ G + Y+DSLGM
Sbjct: 699 RIRPHFDHPEPLAGRSHYQDSLGM 722
>gb|PKA48096.1| Polyadenylate-binding protein 5 [Apostasia shenzhenica]
Length = 824
Score = 67.8 bits (164), Expect(2) = 3e-15
Identities = 33/59 (55%), Positives = 35/59 (59%)
Frame = -1
Query: 403 ARGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
+RGGRR TS R FP+RR PFPPE D PFG HF EDSYFYGD G G
Sbjct: 690 SRGGRRGFTSGRLGAFDRGRGRAFPARRPPFPPEGDFGQPFGAPHFGEDSYFYGDGGHG 748
Score = 41.2 bits (95), Expect(2) = 3e-15
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLG 130
R+RPRYD+ DP+ G RYRDSLG
Sbjct: 768 RLRPRYDFSDPLPGDNRYRDSLG 790
>ref|XP_020674592.1| heterogeneous nuclear ribonucleoprotein R-like [Dendrobium
catenatum]
gb|PKU72842.1| Polyadenylate-binding protein 5 [Dendrobium catenatum]
Length = 767
Score = 53.5 bits (127), Expect(2) = 3e-11
Identities = 27/53 (50%), Positives = 29/53 (54%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYG 242
RGGRR STS R FPSRR P+ PE D G FG F ED Y+YG
Sbjct: 634 RGGRRGSTSGRVGAFDRGLGRGFPSRRPPYTPEGDFGGHFGTTQFGEDPYYYG 686
Score = 42.0 bits (97), Expect(2) = 3e-11
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLG 130
RIRPRYD+PDP++ RYRDSLG
Sbjct: 711 RIRPRYDHPDPLSVAPRYRDSLG 733
>ref|XP_020095721.1| nucleolin-like isoform X1 [Ananas comosus]
ref|XP_020095722.1| nucleolin-like isoform X1 [Ananas comosus]
Length = 734
Score = 47.8 bits (112), Expect(2) = 5e-11
Identities = 25/58 (43%), Positives = 27/58 (46%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
RGGR S S R FP RR FPP+ D +G H ED YFYGD G
Sbjct: 602 RGGRWGSGSGRRGAFDGGWGRGFPPRRPQFPPQGDFGRHYGATHLGEDPYFYGDFSHG 659
Score = 47.0 bits (110), Expect(2) = 5e-11
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
R+RPR+D+PDPM GG+ YRDSLGM
Sbjct: 678 RVRPRFDHPDPMLGGSHYRDSLGM 701
>ref|XP_020095723.1| heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Ananas
comosus]
Length = 733
Score = 47.8 bits (112), Expect(2) = 5e-11
Identities = 25/58 (43%), Positives = 27/58 (46%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
RGGR S S R FP RR FPP+ D +G H ED YFYGD G
Sbjct: 601 RGGRWGSGSGRRGAFDGGWGRGFPPRRPQFPPQGDFGRHYGATHLGEDPYFYGDFSHG 658
Score = 47.0 bits (110), Expect(2) = 5e-11
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
R+RPR+D+PDPM GG+ YRDSLGM
Sbjct: 677 RVRPRFDHPDPMLGGSHYRDSLGM 700
>ref|XP_020582085.1| nucleolin-like [Phalaenopsis equestris]
Length = 800
Score = 50.4 bits (119), Expect(2) = 9e-11
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = -1
Query: 400 RGGRRISTSAXXXXXXXXXXRVFPSRRQPFPPEDDLNGPFGPRHFSEDSYFYG 242
+GGRR STS R FPSRR P+ E D +G FG F ED YFYG
Sbjct: 669 QGGRRGSTSGRLGAFDRGRGRGFPSRRPPYSQEGDFSGHFGAAQFGEDPYFYG 721
Score = 43.5 bits (101), Expect(2) = 9e-11
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLG 130
R+RPRYD PDP++ G RYRDSLG
Sbjct: 744 RLRPRYDLPDPLSAGPRYRDSLG 766
>ref|XP_009390670.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 719
Score = 47.8 bits (112), Expect(2) = 2e-10
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1
Query: 334 FPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
F SRR PF PE++ PF R+ E+ YFYGD G+G
Sbjct: 609 FSSRRPPFQPEEEFGRPFSGRYVGEEPYFYGDAGRG 644
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYRDSLGM 127
R+RPRYD+PDP+ G +RYRDS GM
Sbjct: 664 RVRPRYDHPDPLPGASRYRDSFGM 687
>ref|XP_009390662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 723
Score = 47.8 bits (112), Expect(2) = 8e-09
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1
Query: 334 FPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
F SRR PF PE++ PF R+ E+ YFYGD G+G
Sbjct: 609 FSSRRPPFQPEEEFGRPFSGRYVGEEPYFYGDAGRG 644
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -2
Query: 198 RIRPRYDYPDPMTGGTRYR----DSLGM 127
R+RPRYD+PDP+ G +RYR DS GM
Sbjct: 664 RVRPRYDHPDPLPGASRYRGSFSDSFGM 691
>gb|OVA12858.1| RNA recognition motif domain [Macleaya cordata]
Length = 820
Score = 47.8 bits (112), Expect(2) = 6e-08
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -1
Query: 334 FPSRRQPFPPEDDLNGPFGPRHFSEDSYFYGDVGQG 227
F SRRQPF PE + PFG RHF +D Y Y D G G
Sbjct: 715 FHSRRQPFSPEGHFSRPFGGRHFIDDPYLYTDDGHG 750
Score = 36.6 bits (83), Expect(2) = 6e-08
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
Frame = -2
Query: 198 RIRPRYDYPDPM--TGGTRYRDSLG 130
R+RPR+DYPDP+ + TRY+DS G
Sbjct: 769 RLRPRFDYPDPLVSSSSTRYQDSYG 793