BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00007558
         (2096 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp...  1081   0.0  
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ...   812   0.0  
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub...   813   0.0  
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   810   0.0  
ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub...   782   0.0  
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub...   782   0.0  
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana...   747   0.0  
gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobi...   706   0.0  
ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Set...   723   0.0  
gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial ...   704   0.0  
gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     708   0.0  
gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     708   0.0  
gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     708   0.0  
gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays...   708   0.0  
gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria ital...   714   0.0  
gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     700   0.0  
ref|XP_021314141.1| DNA-directed RNA polymerase V subunit 1 isof...   711   0.0  
gb|AQK60589.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     708   0.0  
ref|XP_021314138.1| DNA-directed RNA polymerase V subunit 1 isof...   711   0.0  
gb|AQK60578.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     708   0.0  

>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
 ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
          Length = 1945

 Score = 1081 bits (2795), Expect = 0.0
 Identities = 541/711 (76%), Positives = 598/711 (84%), Gaps = 25/711 (3%)
 Frame = -1

Query: 2087 FVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGILFKN 1908
            FVS++S  +  PSSEA+GLVK+ L HGL PFE FVHSISAREVIIRSSRGLTEPG+LFKN
Sbjct: 732  FVSRFSTTDVSPSSEAHGLVKNPLFHGLNPFEDFVHSISAREVIIRSSRGLTEPGVLFKN 791

Query: 1907 LMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAISTPAY 1728
            LMAILRDVV+CYDGTVRNVCSNSIIQ  YELDE   +  V+ AGEPVGVLAATAIS PAY
Sbjct: 792  LMAILRDVVICYDGTVRNVCSNSIIQLAYELDEA-RAECVATAGEPVGVLAATAISNPAY 850

Query: 1727 KAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALAVQN 1548
            KAVLDSS+STNSSWE MKEILLCKA YQN  IDRR+VLYLN+CCCGKKFCREN+ALAVQN
Sbjct: 851  KAVLDSSSSTNSSWELMKEILLCKAAYQNAFIDRRIVLYLNDCCCGKKFCRENSALAVQN 910

Query: 1547 CLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQ 1368
            CLRSV LKHCA+D SIEYQKQI LPNS+ T SGLVGH+HLD  RLKILNQ TDG+LHKCQ
Sbjct: 911  CLRSVTLKHCAIDFSIEYQKQICLPNSA-TVSGLVGHLHLDTTRLKILNQNTDGVLHKCQ 969

Query: 1367 EVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHG 1188
            EV +GHTRKKGHLSNI RRTFLS+SE C S Q ND NLSEFPCLQFSY AG VDETL+ G
Sbjct: 970  EVIRGHTRKKGHLSNILRRTFLSASEDCSSLQSNDANLSEFPCLQFSYCAGGVDETLQQG 1029

Query: 1187 MHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVA 1008
            MHIMINTICPILLDTI+KGDPR+D VNIIW+GPD+TSWVS+P   ++GELALEVVVQKVA
Sbjct: 1030 MHIMINTICPILLDTIIKGDPRIDTVNIIWSGPDSTSWVSNPDNPVRGELALEVVVQKVA 1089

Query: 1007 ARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVS 828
            A+K GDAWRIVLDACLPV+HLI+TTRSIPYGIQQIKE+FGISCAFDQSVQRLSK IRMVS
Sbjct: 1090 AKKNGDAWRIVLDACLPVIHLINTTRSIPYGIQQIKEIFGISCAFDQSVQRLSKSIRMVS 1149

Query: 827  KGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEK 648
            KGVIKEHLVLVGNNMTCTGNLIGFNTSGFK+LFRSLKVQVPFTEATLLTPMKCFE+AAEK
Sbjct: 1150 KGVIKEHLVLVGNNMTCTGNLIGFNTSGFKSLFRSLKVQVPFTEATLLTPMKCFEKAAEK 1209

Query: 647  CHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEK 468
            CHTD+LGS+VSSVSWGKHVA+GTGTHFEVIWG K QV CNEDVGKDVYDLLAWVREPQE+
Sbjct: 1210 CHTDSLGSIVSSVSWGKHVAVGTGTHFEVIWGHKNQVACNEDVGKDVYDLLAWVREPQER 1269

Query: 467  DLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDY--------DSCEAWGWKGK 312
            DLPGACLGSDI+DFLDDFQ DDMPLSPEPN+  EKPTFEDY        DS + WG  GK
Sbjct: 1270 DLPGACLGSDIDDFLDDFQGDDMPLSPEPNNICEKPTFEDYVETESRGNDSWQEWGRTGK 1329

Query: 311  PCADNGNKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWE---KVSP--------- 168
            P       S+W+N + TV ESD W AW +K K SAD GNKS WE   KV+          
Sbjct: 1330 P------SSSWDN-AKTVTESDTWSAWDNKAKPSADTGNKSSWEFSPKVAEAENRNKTSW 1382

Query: 167  -----TAVESDNWQPWGSKAKPSADSGNKSSWEKASPAVIESNSQWGRKEK 30
                 T  +SD+W  W +KAKPS ++ NK+SW+  SP V+ ++   GR+ +
Sbjct: 1383 DNGKNTVTKSDDWSSWENKAKPSTNTSNKTSWQ-VSPKVVGADIWQGRESR 1432


>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
          Length = 1673

 Score =  812 bits (2098), Expect = 0.0
 Identities = 412/673 (61%), Positives = 509/673 (75%), Gaps = 5/673 (0%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+KYS      S EAYGLVK+   HGL P+E  VH+IS+REVI+RSSRGLTEPG L
Sbjct: 727  FTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSRGLTEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDV++CYDG+VRNVCSNSIIQFEY  D+G  S++VSPAGEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVIICYDGSVRNVCSNSIIQFEYGEDDGANSLNVSPAGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVL+SS S NSSWE MKEILLCK  ++N + DRRV+LYLN+C CGKKFC+ENAA+A
Sbjct: 847  PAYKAVLESSQSNNSSWELMKEILLCKVMFKNVVTDRRVILYLNDCFCGKKFCKENAAIA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD M LK+LN++ D IL 
Sbjct: 907  VQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMGLKLLNRSPDEILR 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD--- 1206
            KCQ+V  G+ +KKG LS+ FRR  LS SECC ++QP+ GNLS FPCLQFSY   +     
Sbjct: 967  KCQDVIFGYAKKKGKLSHFFRRIILSLSECCCTRQPDVGNLSPFPCLQFSYCDQSATPDC 1026

Query: 1205 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
            E+LE  +H+M NTICPILLDTI+KGDPRV   NI+W GPDATSWV +  +TLKGE+A+EV
Sbjct: 1027 ESLEGAIHVMANTICPILLDTIIKGDPRVYDANIVWIGPDATSWVRNSCKTLKGEVAIEV 1086

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            VV+K A R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS 
Sbjct: 1087 VVEKDAVRRNGDAWRTVMDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSA 1146

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             I  V+KGV+K+HL+LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCF
Sbjct: 1147 SITKVAKGVLKDHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCF 1206

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F+++W  KQQ+  N+++GK  YD L  V
Sbjct: 1207 ERAAEKCHTDSLASVVSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELV 1265

Query: 485  REPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPC 306
            R   +++    C   D++D L+  +N+++ LSPE     E+ TF+D    + +  K    
Sbjct: 1266 RTSSQREAGDGC-SLDVDD-LEANENNEVCLSPE--IGFEELTFDDGFDVD-YNLKKDVS 1320

Query: 305  ADNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDNWQPWG 132
             +NG   KS+WE +S +V  SD WQ W ++++   D                S +WQ W 
Sbjct: 1321 MENGKVGKSSWEKISDSVAGSDRWQGWENRNQPEMD---------------VSSDWQGWD 1365

Query: 131  SKAKPSADSGNKS 93
            +  +P  D  N+S
Sbjct: 1366 NGKQPFTDRSNRS 1378


>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score =  813 bits (2099), Expect = 0.0
 Identities = 416/699 (59%), Positives = 513/699 (73%), Gaps = 5/699 (0%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+KYS      S EAYGLVK+   HGL P+E  VH+IS+REVI+RSSRGLTEPG L
Sbjct: 727  FTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSRGLTEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDV++CYDG+VRNVCSNSIIQFEY  D+G  S++VSPAGEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVIICYDGSVRNVCSNSIIQFEYGEDDGANSLNVSPAGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVL+SS S NSSWE MKEILLCK  ++N + DRRV+LYLN+C CGKKFC+ENAA+A
Sbjct: 847  PAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCLCGKKFCKENAAIA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D IL 
Sbjct: 907  VQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILR 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD--- 1206
            KCQ+V  G+ +KKG LS+ FRR  LS SECC ++QP+ GNLS FPCLQFSY   +     
Sbjct: 967  KCQDVIFGYGKKKGKLSHFFRRIILSLSECCSTRQPDVGNLSPFPCLQFSYRDQSTTPDC 1026

Query: 1205 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
            E+LE  +H+M NTICPILLDTI+KGDPRV   NI+WTGPDATSWV +  +TLKGE+A+EV
Sbjct: 1027 ESLEGAIHVMANTICPILLDTIIKGDPRVHEANIVWTGPDATSWVRNSCKTLKGEVAIEV 1086

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            VV+K A R+ GDAWR V+DACLPV+HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS 
Sbjct: 1087 VVEKDAVRRNGDAWRTVIDACLPVIHLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSA 1146

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             I  V+KGV+K HL+LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCF
Sbjct: 1147 SITKVAKGVLKGHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCF 1206

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F+++W  KQQ+  N+++GK  YD L  V
Sbjct: 1207 ERAAEKCHTDSLVSVVSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELV 1265

Query: 485  REPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPC 306
            R   +++    C   D++D L+  +N+++ LSPE     E+ TF+D    + +  K    
Sbjct: 1266 RTSSQREAGDGC-SLDVDD-LEVNENNEVCLSPE--IGFEELTFDDGFDID-YNCKKDVS 1320

Query: 305  ADNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDNWQPWG 132
             +NG    S+WE +S +V  SD WQ W ++++   D                S  WQ W 
Sbjct: 1321 MENGKVGNSSWEKISDSVAGSDRWQGWENRNQPEMD---------------MSSGWQGWD 1365

Query: 131  SKAKPSADSGNKSSWEKASPAVIESNSQWGRKEKPSADN 15
            +  +P  D  N S               WG K+    +N
Sbjct: 1366 NGKQPFTDQSNTS-------------QGWGNKKVTDGEN 1391


>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1-like [Phoenix dactylifera]
          Length = 1656

 Score =  810 bits (2091), Expect = 0.0
 Identities = 415/673 (61%), Positives = 508/673 (75%), Gaps = 5/673 (0%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+KYS      S EAYGLVK+   HGL P+E  VHSIS+REVI+RSSRGLTEPG L
Sbjct: 685  FTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHSISSREVIVRSSRGLTEPGTL 744

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDV++CYDG+VRNVCSNS+IQFEY  D+G  S++VSPAGEPVGVLAATAIS 
Sbjct: 745  FKNLMAILRDVIICYDGSVRNVCSNSVIQFEYGEDDGANSLNVSPAGEPVGVLAATAISN 804

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVL+SS S NSSWE MKEILLCK  ++N + DRRV+LYLN+C CGKKFC+ENAA+ 
Sbjct: 805  PAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCFCGKKFCKENAAIT 864

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D IL 
Sbjct: 865  VQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILR 924

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSY---FAGAVD 1206
            KCQ+V  G+ +KKG LS+ FRR  L  SECC ++QP+ GNLS FPCLQFSY    A    
Sbjct: 925  KCQDVIFGYGKKKGKLSHFFRRIILLVSECCSTRQPDVGNLSPFPCLQFSYCDQTATPDC 984

Query: 1205 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
            E+LE G+H+M NTICPILLDTI+KGDPRV   NI+WTGP ATSWV +  +TLKGE+A+EV
Sbjct: 985  ESLERGIHVMANTICPILLDTIIKGDPRVREANIVWTGPYATSWVRNSCKTLKGEVAVEV 1044

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            VV+K A+R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS 
Sbjct: 1045 VVEKDASRRHGDAWRTVIDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQAVQRLSA 1104

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             I MV+KGV+K+HL+LV N+M+CTGNLIGFNT+G+KAL RSLKVQVPFTEATL+TPMKCF
Sbjct: 1105 SITMVAKGVLKDHLILVANSMSCTGNLIGFNTAGYKALXRSLKVQVPFTEATLITPMKCF 1164

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F+++W  K+Q+  N+++GK  YD L  V
Sbjct: 1165 ERAAEKCHTDSLTSVVSSCLWGKHVAIGTGSPFQILW-NKRQMAENQNIGKGFYDFLELV 1223

Query: 485  REPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPC 306
            R   + +    C   D++D L   +ND++ LSPE     EK TF+D    + +  K    
Sbjct: 1224 RTSSQGEAGNGC-SVDVDD-LGVNENDEVCLSPE--IGFEKLTFDDGFEVD-YNLKKDIS 1278

Query: 305  ADNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDNWQPWG 132
             +NG    S+WE +S +VV SD WQ W        +NGN+       P    S  WQ W 
Sbjct: 1279 MENGKVGNSSWEKLSDSVVGSDRWQGW--------ENGNQ-------PEMDTSSGWQGWD 1323

Query: 131  SKAKPSADSGNKS 93
            +  +P  D  ++S
Sbjct: 1324 NGKQPFIDRSDRS 1336


>ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1444

 Score =  782 bits (2020), Expect = 0.0
 Identities = 405/665 (60%), Positives = 494/665 (74%), Gaps = 15/665 (2%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            + +FVSK+S  E    SEAYGLVK+S  HGL P+E  VH+IS+REVI+RSSRGLTEPG L
Sbjct: 726  FLNFVSKHSAGEVDHPSEAYGLVKNSFFHGLNPYEMLVHAISSREVIVRSSRGLTEPGTL 785

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDG+VRNVC+ S++Q EY  DEGV SV+  PAG+PVGVLAATAIS 
Sbjct: 786  FKNLMAILRDVVICYDGSVRNVCTGSLVQLEYVDDEGVNSVNTPPAGDPVGVLAATAISN 845

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
             AYKAVLDSS S NSSWE MKEILLCK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA  
Sbjct: 846  LAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAAFT 905

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            V NCL+ V LK CA +  IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN   D ILH
Sbjct: 906  VLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILH 965

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF---AGAVD 1206
            KCQ V   + +KKG LS+ FRR FLS+ +CC  +QP+DGNL   PCLQFSY    A   +
Sbjct: 966  KCQAVIFSYGKKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQNN 1025

Query: 1205 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
             +LE  +H+M  TICPILLDTIVKGDPRV  V I+W GPDATSWV S  +TLKG+L LEV
Sbjct: 1026 ISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEV 1085

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            V+ + A R+ GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK
Sbjct: 1086 VLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSK 1145

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMKCF
Sbjct: 1146 SIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCF 1205

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAAEKC  D+L SVVSS SWGK+VA+GTG  F+++W  K+Q+  N+D+GK VYD L  +
Sbjct: 1206 ERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELL 1264

Query: 485  REPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPC 306
            RE    +  G  L +D+++  ++   + + LSP+ +      TF+D D  E + ++ +  
Sbjct: 1265 RETSSGEATGRYL-ADVDELAEE---NGICLSPDLDGC---MTFDDSDDVE-YNFQKRIG 1316

Query: 305  ADNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNK--------SRWE--KVSPTA 162
              NG   +S+WE V P  V+S NW+ WG K+ T  DN           S W+  +V    
Sbjct: 1317 VVNGKSGESSWE-VDPVSVKSGNWEGWGDKESTHVDNCESPATKHNVWSSWDSIQVKQKT 1375

Query: 161  VESDN 147
            VES+N
Sbjct: 1376 VESEN 1380


>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
 ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1738

 Score =  782 bits (2020), Expect = 0.0
 Identities = 405/665 (60%), Positives = 494/665 (74%), Gaps = 15/665 (2%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            + +FVSK+S  E    SEAYGLVK+S  HGL P+E  VH+IS+REVI+RSSRGLTEPG L
Sbjct: 726  FLNFVSKHSAGEVDHPSEAYGLVKNSFFHGLNPYEMLVHAISSREVIVRSSRGLTEPGTL 785

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDG+VRNVC+ S++Q EY  DEGV SV+  PAG+PVGVLAATAIS 
Sbjct: 786  FKNLMAILRDVVICYDGSVRNVCTGSLVQLEYVDDEGVNSVNTPPAGDPVGVLAATAISN 845

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
             AYKAVLDSS S NSSWE MKEILLCK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA  
Sbjct: 846  LAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAAFT 905

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            V NCL+ V LK CA +  IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN   D ILH
Sbjct: 906  VLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILH 965

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF---AGAVD 1206
            KCQ V   + +KKG LS+ FRR FLS+ +CC  +QP+DGNL   PCLQFSY    A   +
Sbjct: 966  KCQAVIFSYGKKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQNN 1025

Query: 1205 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
             +LE  +H+M  TICPILLDTIVKGDPRV  V I+W GPDATSWV S  +TLKG+L LEV
Sbjct: 1026 ISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEV 1085

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            V+ + A R+ GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK
Sbjct: 1086 VLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSK 1145

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMKCF
Sbjct: 1146 SIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCF 1205

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAAEKC  D+L SVVSS SWGK+VA+GTG  F+++W  K+Q+  N+D+GK VYD L  +
Sbjct: 1206 ERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELL 1264

Query: 485  REPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPC 306
            RE    +  G  L +D+++  ++   + + LSP+ +      TF+D D  E + ++ +  
Sbjct: 1265 RETSSGEATGRYL-ADVDELAEE---NGICLSPDLDGC---MTFDDSDDVE-YNFQKRIG 1316

Query: 305  ADNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNK--------SRWE--KVSPTA 162
              NG   +S+WE V P  V+S NW+ WG K+ T  DN           S W+  +V    
Sbjct: 1317 VVNGKSGESSWE-VDPVSVKSGNWEGWGDKESTHVDNCESPATKHNVWSSWDSIQVKQKT 1375

Query: 161  VESDN 147
            VES+N
Sbjct: 1376 VESEN 1380


>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
          Length = 1800

 Score =  747 bits (1928), Expect = 0.0
 Identities = 387/698 (55%), Positives = 498/698 (71%), Gaps = 14/698 (2%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +S FV+++S   DK   EAYGLVKSS  +GL P+E  VH+IS+REV++RSSRGLTEPG L
Sbjct: 729  FSTFVNRFSTGGDKHPCEAYGLVKSSFYNGLNPYEELVHAISSREVLVRSSRGLTEPGTL 788

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDG+VRNVCSNS+IQF+Y  D+ V+ + +SP GEPVGVLAATAIS 
Sbjct: 789  FKNLMAILRDVVICYDGSVRNVCSNSVIQFDYGDDDRVDLIGLSPPGEPVGVLAATAISN 848

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S NSSWE MKEILL K +Y+ND+ DRRV+LYLN+C CGKKFC+E AALA
Sbjct: 849  PAYKAVLDSSQSNNSSWELMKEILLTKVSYKNDVNDRRVILYLNDCFCGKKFCKERAALA 908

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L+ C  D  IEYQK+I LP +    SGLVGHIHLD M+L+ LN++ D +LH
Sbjct: 909  VQSCLKRVTLEDCVTDFLIEYQKEIILPGNPEPTSGLVGHIHLDKMQLESLNRSIDEVLH 968

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETL 1197
             C+EV   + +KKG  S++F++  L +SECC  Q+  D NLS  PCLQFSY    V  + 
Sbjct: 969  TCEEVILKNAKKKGQFSHLFKKITLMASECCSIQKAKDSNLSRTPCLQFSYCDENVAPSC 1028

Query: 1196 EHG---MHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
            E+    + ++ NT+ P LLDTIVKGDPRV    ++W GPDATSWV +   TLKGELA+E+
Sbjct: 1029 EYFEGIVQVLANTVYPTLLDTIVKGDPRVHEAKVVWVGPDATSWVRNSSNTLKGELAVEM 1088

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            V++K AA   GDAWR  +DACLPVM LID  RSIPYG+QQI+ELFGISCAFDQ+V+R+S 
Sbjct: 1089 VIEKSAAPHNGDAWRTAMDACLPVMRLIDARRSIPYGVQQIRELFGISCAFDQAVERMST 1148

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             IR V+KGV+K+HL+LV ++MTCTG L GFNT G+KA FRSLKVQVPFTEATL TPMKCF
Sbjct: 1149 SIRKVAKGVLKDHLILVASSMTCTGKLNGFNTGGYKATFRSLKVQVPFTEATLFTPMKCF 1208

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAAEKCH+D+L S VSS SWGKHVALGTG+ F++IW  K+Q+  ++D+GK +YD L  V
Sbjct: 1209 ERAAEKCHSDSLDSGVSSCSWGKHVALGTGSSFQIIW-DKKQMANDKDIGKGLYDFLVMV 1267

Query: 485  R-EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKP 309
            R    +++  GACL  D++D L++  ++ + LSP+ +     PTFE+    E   WKG  
Sbjct: 1268 RTSGDQREANGACL-EDVDD-LEEENDEALCLSPQFDDGFTNPTFEETFEGEVSFWKGS- 1324

Query: 308  CADNG--NKSNWENVSPTVVE------SDNWQAWGSKDKTSADNGNKSRWEK-VSPTAVE 156
              +NG  N S+W+       E       ++W+ W    K++  + N S WE  V    + 
Sbjct: 1325 IHENGKINNSSWDKPRECNFEFEKEAPPESWEKW----KSTNTSRNASAWESGVRKENIV 1380

Query: 155  SDNWQPWGSKAKPSADSGNKSSW-EKASPAVIESNSQW 45
             ++W           DS +K+SW +K +    ES+ +W
Sbjct: 1381 EEDW-------SCVTDSPSKNSWCKKLASNTQESDDRW 1411


>gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobium catenatum]
          Length = 1205

 Score =  706 bits (1822), Expect = 0.0
 Identities = 382/702 (54%), Positives = 480/702 (68%), Gaps = 6/702 (0%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +S+++ K+S+      SEA GLVKSS   GL P+E  VHSIS REV++RSSRGLTEPG L
Sbjct: 90   FSYYLGKHSVDGVGVPSEACGLVKSSFFGGLNPYEDLVHSISTREVVVRSSRGLTEPGTL 149

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRD VVCYDGTVRNVC NS+IQF+Y + +G+ +++ + AGEPVGVLAATAIS 
Sbjct: 150  FKNLMAILRDAVVCYDGTVRNVCRNSVIQFQYRVKDGIGALTDNLAGEPVGVLAATAISN 209

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS STNSSWE MKEILL K  YQN   DRRVVLYLN+C CGKKFC+E AA A
Sbjct: 210  PAYKAVLDSSLSTNSSWELMKEILLSKVGYQNVFNDRRVVLYLNDCLCGKKFCKEMAAFA 269

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+   L+ CA + SIEY+K +   +S    SGLVGHIHLD   LK  N+ T+ IL 
Sbjct: 270  VQDCLKKFTLRDCASEFSIEYKKNMVACDSLEAVSGLVGHIHLDRGMLKAWNKRTEEILL 329

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAV-D 1206
            KCQE+     +KKG LS +F+   L++SECC  Q  +D NLS  PCLQF YF   G + D
Sbjct: 330  KCQEILSSRQKKKGPLSFLFKGIVLTTSECC--QHSDDANLSSVPCLQFYYFDRGGKISD 387

Query: 1205 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1026
            E+L+  +HIM N ICP+LL+T++KGD RVD  NIIW  P  TS V    R +KGELA+EV
Sbjct: 388  ESLDRVIHIMANVICPMLLETVIKGDSRVDLANIIWIEPTTTSSVRD-RRPMKGELAIEV 446

Query: 1025 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 846
            V++K  AR+ GDAWR VLDACLPVMHLID  RSIPYGI+Q++ L GISC+F+QSV RLS 
Sbjct: 447  VIEKSFARQSGDAWRTVLDACLPVMHLIDMRRSIPYGIKQVEHLLGISCSFEQSVLRLSA 506

Query: 845  CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 666
             I+MV+KGV+KEHL+LV N+MTCTGN +GFN SGFK L RSLK+Q+PFTEATL TP+KCF
Sbjct: 507  SIKMVAKGVLKEHLILVANSMTCTGNFLGFNNSGFKKLLRSLKIQMPFTEATLFTPIKCF 566

Query: 665  ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 486
            ERAA+KCHTD L S+VSS  WGKHVA+GTG+ F+V W  +QQV  N+DV KDVY+ L  V
Sbjct: 567  ERAAQKCHTDTLTSIVSSCLWGKHVAVGTGSCFKVFW-DRQQVKANKDVEKDVYEFLELV 625

Query: 485  R-EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED-YDSCEAWGWKGK 312
            +    E+++       D++D + + +  +   SP P     K T +D  DS         
Sbjct: 626  QTATTEREV-------DVDDLMYESEY-EFCASPVPGIRIGKETCDDGTDSLFHSENNVI 677

Query: 311  PCADNGNKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDN-WQPW 135
                +G+KSNW+N S + +E +NW+ W S+ K           E  S +A++ D  W  W
Sbjct: 678  LERGDGDKSNWQNGSESAIEQNNWKGWDSRKKPE---------EVDSQSALKKDGAWSGW 728

Query: 134  GSKAKPSADSGNKSSWEKASPAVIESNSQWGRKEKPSADNGN 9
                    D+ ++    K    + E    WG  +K S DNGN
Sbjct: 729  --------DTTSEKEPTKFGSQMPEVQRGWGSSKKTSVDNGN 762


>ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Setaria italica]
          Length = 2038

 Score =  723 bits (1867), Expect = 0.0
 Identities = 367/703 (52%), Positives = 488/703 (69%), Gaps = 6/703 (0%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +S+FV+K+S   D+   EAYGLV+SS  HGL P+E  VHSIS RE I+RSSRGLTEPG L
Sbjct: 727  FSNFVNKHSDIGDEHPPEAYGLVQSSYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN CSNSIIQ +Y+ D+  +  S  P GEPVGVLAATAIST
Sbjct: 787  FKNLMAILRDVVICYDGTVRNTCSNSIIQLKYKEDDETDFPSALPPGEPVGVLAATAIST 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAY+AVLDSS S N+SWE MKEIL  K  Y+ND+ DR+V+L+LN+C C KKFC+E AAL 
Sbjct: 847  PAYRAVLDSSQSNNASWESMKEILQTKVGYKNDMKDRKVILFLNDCSCPKKFCKERAALT 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CLR V L  CA D+SIE+QKQI L  +S  A  LVGHIHLD  +L+ +N +T  IL 
Sbjct: 907  VQSCLRRVTLADCATDISIEHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDE 1203
            KC+E++  + +KKGHL ++F++   S+ +C  +Q   DG L   PC+QFS+      + E
Sbjct: 967  KCEEISGRYGKKKGHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFSDDNTILSE 1026

Query: 1202 TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVV 1023
            ++E  ++++ +++C +LLDTI+KGDPR+ +  IIW   +ATSWV +   TLKGE  LE++
Sbjct: 1027 SVERAVNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTLKGEPTLEII 1086

Query: 1022 VQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKC 843
            V+K  A + G AWR V+DAC+PV++LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS  
Sbjct: 1087 VEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTT 1146

Query: 842  IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFE 663
            ++MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFTE+TL TPMKCFE
Sbjct: 1147 VKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFE 1206

Query: 662  RAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR 483
            +AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR
Sbjct: 1207 KAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVR 1265

Query: 482  EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCA 303
              QEK   G     D++  +++   DD+ LSPEP+  H KPTFE  D+ E  G +     
Sbjct: 1266 TDQEK--AGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTFE--DNVEEQGIQNGSSW 1321

Query: 302  DNGN--KSNWENVSPTVVESDNWQAW--GSKDKTSADNGNKSRWEKVSPTAVESDNWQPW 135
            +N     S+WE  +    +S +W  W  G+   T   + + S W+  +     S +W  W
Sbjct: 1322 ENDTTMNSSWEQNASAGNDSGDWGGWSNGAAAATKPLDQDNSCWDAHATVENNSTDWGGW 1381

Query: 134  GSKAKPSADSGNKSSWEKASPAVIESNSQWGRKEKPSADNGNK 6
            G++ + + +    ++W      +  S      + K SA   +K
Sbjct: 1382 GTEKQTNGEQAEINTWADKGAGMESSAGDDNWEMKSSAPEKSK 1424


>gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial [Zea mays]
          Length = 1436

 Score =  704 bits (1816), Expect = 0.0
 Identities = 368/718 (51%), Positives = 482/718 (67%), Gaps = 34/718 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 727  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 847  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 907  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 967  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 1026

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 1027 IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 1086

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 1087 EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 1146

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 1147 KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 1206

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 1207 AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1265

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 1266 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1321

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1322 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1379

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQW 45
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W
Sbjct: 1380 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTW 1436


>gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1615

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/734 (50%), Positives = 490/734 (66%), Gaps = 36/734 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 410  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 469

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 470  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 529

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 530  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 589

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 590  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 649

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 650  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 709

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 710  IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 769

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 770  EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 829

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 830  KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 889

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 890  AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 948

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 949  DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1004

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1005 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1062

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQWGR 39
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W +
Sbjct: 1063 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTWDK 1121

Query: 38   KEKPSADN--GNKS 3
            ++    D   GN+S
Sbjct: 1122 RKGDGGDGAWGNRS 1135


>gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1663

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/734 (50%), Positives = 490/734 (66%), Gaps = 36/734 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 727  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 847  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 907  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 967  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 1026

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 1027 IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 1086

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 1087 EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 1146

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 1147 KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 1206

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 1207 AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1265

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 1266 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1321

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1322 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1379

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQWGR 39
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W +
Sbjct: 1380 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTWDK 1438

Query: 38   KEKPSADN--GNKS 3
            ++    D   GN+S
Sbjct: 1439 RKGDGGDGAWGNRS 1452


>gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1719

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/734 (50%), Positives = 490/734 (66%), Gaps = 36/734 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 514  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 573

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 574  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 633

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 634  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 693

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 694  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 753

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 754  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 813

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 814  IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 873

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 874  EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 933

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 934  KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 993

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 994  AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1052

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 1053 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1108

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1109 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1166

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQWGR 39
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W +
Sbjct: 1167 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTWDK 1225

Query: 38   KEKPSADN--GNKS 3
            ++    D   GN+S
Sbjct: 1226 RKGDGGDGAWGNRS 1239


>gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
 gb|AQK60577.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
 gb|AQK60582.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1776

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/734 (50%), Positives = 490/734 (66%), Gaps = 36/734 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 571  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 630

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 631  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 690

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 691  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 750

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 751  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 810

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 811  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 870

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 871  IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 930

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 931  EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 990

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 991  KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 1050

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 1051 AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1109

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 1110 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1165

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1166 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1223

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQWGR 39
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W +
Sbjct: 1224 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTWDK 1282

Query: 38   KEKPSADN--GNKS 3
            ++    D   GN+S
Sbjct: 1283 RKGDGGDGAWGNRS 1296


>gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria italica]
          Length = 2050

 Score =  714 bits (1844), Expect = 0.0
 Identities = 367/715 (51%), Positives = 488/715 (68%), Gaps = 18/715 (2%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +S+FV+K+S   D+   EAYGLV+SS  HGL P+E  VHSIS RE I+RSSRGLTEPG L
Sbjct: 727  FSNFVNKHSDIGDEHPPEAYGLVQSSYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN CSNSIIQ +Y+ D+  +  S  P GEPVGVLAATAIST
Sbjct: 787  FKNLMAILRDVVICYDGTVRNTCSNSIIQLKYKEDDETDFPSALPPGEPVGVLAATAIST 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAY+AVLDSS S N+SWE MKEIL  K  Y+ND+ DR+V+L+LN+C C KKFC+E AAL 
Sbjct: 847  PAYRAVLDSSQSNNASWESMKEILQTKVGYKNDMKDRKVILFLNDCSCPKKFCKERAALT 906

Query: 1556 VQNCLRSVMLKHCALDLSIE------------YQKQIGLPNSSGTASGLVGHIHLDMMRL 1413
            VQ+CLR V L  CA D+SIE            +QKQI L  +S  A  LVGHIHLD  +L
Sbjct: 907  VQSCLRRVTLADCATDISIEGERQKYVVCIFRHQKQINLDETSEAAPTLVGHIHLDKAQL 966

Query: 1412 KILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQ 1233
            + +N +T  IL KC+E++  + +KKGHL ++F++   S+ +C  +Q   DG L   PC+Q
Sbjct: 967  ERINISTQDILQKCEEISGRYGKKKGHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQ 1026

Query: 1232 FSYFAG--AVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPG 1059
            FS+      + E++E  ++++ +++C +LLDTI+KGDPR+ +  IIW   +ATSWV +  
Sbjct: 1027 FSFSDDNTILSESVERAVNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQ 1086

Query: 1058 RTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISC 879
             TLKGE  LE++V+K  A + G AWR V+DAC+PV++LIDT RSIPYGIQQ+KEL GISC
Sbjct: 1087 NTLKGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISC 1146

Query: 878  AFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFT 699
            AFDQ VQRLS  ++MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFT
Sbjct: 1147 AFDQVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFT 1206

Query: 698  EATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDV 519
            E+TL TPMKCFE+AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W +  Q+  N++ 
Sbjct: 1207 ESTLFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEY 1265

Query: 518  GKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDS 339
            G  +YD LA VR  QEK   G     D++  +++   DD+ LSPEP+  H KPTFE  D+
Sbjct: 1266 GDGLYDFLALVRTDQEK--AGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTFE--DN 1321

Query: 338  CEAWGWKGKPCADNGN--KSNWENVSPTVVESDNWQAW--GSKDKTSADNGNKSRWEKVS 171
             E  G +     +N     S+WE  +    +S +W  W  G+   T   + + S W+  +
Sbjct: 1322 VEEQGIQNGSSWENDTTMNSSWEQNASAGNDSGDWGGWSNGAAAATKPLDQDNSCWDAHA 1381

Query: 170  PTAVESDNWQPWGSKAKPSADSGNKSSWEKASPAVIESNSQWGRKEKPSADNGNK 6
                 S +W  WG++ + + +    ++W      +  S      + K SA   +K
Sbjct: 1382 TVENNSTDWGGWGTEKQTNGEQAEINTWADKGAGMESSAGDDNWEMKSSAPEKSK 1436


>gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1465

 Score =  700 bits (1806), Expect = 0.0
 Identities = 364/700 (52%), Positives = 478/700 (68%), Gaps = 7/700 (1%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 727  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 847  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 907  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 967  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 1026

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 1027 IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 1086

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 1087 EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 1146

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 1147 KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 1206

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 1207 AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1265

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFED                
Sbjct: 1266 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFED---------------- 1307

Query: 299  NGNKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDNWQPW----G 132
                 N+E     + +  +W+   +           S WE+ +  A +S +W  W    G
Sbjct: 1308 -----NFE--EQNIQKGSSWEIGIT---------TNSSWEQNASVANDSGDWGGWSSGGG 1351

Query: 131  SKAKPSADSGNKSSWEKASPAVIESNSQWG--RKEKPSAD 18
            + AKP AD  N  SWE  +     S + WG    EKP+ +
Sbjct: 1352 AAAKP-ADQDN--SWEVHAKVQDNSTTDWGGWSVEKPTGE 1388


>ref|XP_021314141.1| DNA-directed RNA polymerase V subunit 1 isoform X2 [Sorghum bicolor]
          Length = 1982

 Score =  711 bits (1835), Expect = 0.0
 Identities = 370/728 (50%), Positives = 484/728 (66%), Gaps = 32/728 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +S FV+K+S   D+ S EA+GLV+SS  HGL P+E  VH+I  RE +IRSSRGL+EPG L
Sbjct: 727  FSSFVNKHSAIGDEYSPEAFGLVQSSYFHGLNPYEELVHAICTRETMIRSSRGLSEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S S  P GEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDEADSSSAVPPGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND  DR+VVL+L++C C KKFC+E AALA
Sbjct: 847  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDAKDRKVVLFLSDCSCAKKFCKERAALA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD  +L+ +N +   IL 
Sbjct: 907  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGQLERINISIQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAVDE 1203
            KCQEV+  + +KKGHL ++ ++   ++ +C  +Q P  G L + PC+QFS+   +  + E
Sbjct: 967  KCQEVSGRYGKKKGHLCHLLKKITFATCDCSFTQMPISGKLHKVPCVQFSFSDESTVLSE 1026

Query: 1202 TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVV 1023
            ++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DAT+WV +  +  KGE ALE++
Sbjct: 1027 SVERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDATAWVKNTRKVSKGEPALEII 1086

Query: 1022 VQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKC 843
            V+K  A   GDAWR  +DACLPV+ LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS  
Sbjct: 1087 VEKDHAVSNGDAWRTTIDACLPVLDLIDTRRSIPYGIQQVKELIGISCAFDQVVQRLSST 1146

Query: 842  IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFE 663
            ++MV+KGV+K+HL+LV N+MTCTG+LIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE
Sbjct: 1147 VKMVNKGVLKDHLILVANSMTCTGSLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFE 1206

Query: 662  RAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR 483
            +AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W +  Q+  N+D G  +YD LA VR
Sbjct: 1207 KAAEKCDSDSLGCVVSSSSWGKHAAVGTGSSFQILWNE-NQLKSNKDYGDGLYDFLALVR 1265

Query: 482  EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCA 303
              QEK   G     D++  L++   DDM LSPEP+    KPTFE  D+ E    +     
Sbjct: 1266 TDQEK--TGYMFLDDVDYLLEENAIDDMCLSPEPDGTVGKPTFE--DNFEEQNIQKGSSW 1321

Query: 302  DNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSR-----------------WE 180
            +NG   KS+WE  +    +S +W  W S    SA   ++                   W 
Sbjct: 1322 ENGITMKSSWEQDASAANDSGDWGGWSSGGGASAKPADQDNSWEVHAKAQDNCTDWGGWS 1381

Query: 179  KVSPTAVESDNWQP-----WGSKAKPSADSGNKSSWEKAS--PAVIESNSQWGRKE---- 33
               PT   + + QP     W  K          ++WEK S  P     N  WG+ E    
Sbjct: 1382 TDKPTGEATVSGQPAEMDTWADKGTKMESGAGDANWEKKSSTPEASNKNDPWGKSENTWD 1441

Query: 32   KPSADNGN 9
            K   D G+
Sbjct: 1442 KRKGDGGD 1449


>gb|AQK60589.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1877

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/734 (50%), Positives = 490/734 (66%), Gaps = 36/734 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 727  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 847  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 907  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 967  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 1026

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 1027 IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 1086

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 1087 EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 1146

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 1147 KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 1206

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 1207 AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1265

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 1266 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1321

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1322 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1379

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQWGR 39
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W +
Sbjct: 1380 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTWDK 1438

Query: 38   KEKPSADN--GNKS 3
            ++    D   GN+S
Sbjct: 1439 RKGDGGDGAWGNRS 1452


>ref|XP_021314138.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
 ref|XP_021314139.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
 ref|XP_021314140.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
 ref|XP_021314142.1| DNA-directed RNA polymerase V subunit 1 isoform X1 [Sorghum bicolor]
 gb|OQU84386.1| hypothetical protein SORBI_3004G043750 [Sorghum bicolor]
 gb|OQU84387.1| hypothetical protein SORBI_3004G043750 [Sorghum bicolor]
          Length = 2015

 Score =  711 bits (1836), Expect = 0.0
 Identities = 371/704 (52%), Positives = 490/704 (69%), Gaps = 11/704 (1%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +S FV+K+S   D+ S EA+GLV+SS  HGL P+E  VH+I  RE +IRSSRGL+EPG L
Sbjct: 727  FSSFVNKHSAIGDEYSPEAFGLVQSSYFHGLNPYEELVHAICTRETMIRSSRGLSEPGTL 786

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S S  P GEPVGVLAATAIS 
Sbjct: 787  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDEADSSSAVPPGEPVGVLAATAISN 846

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND  DR+VVL+L++C C KKFC+E AALA
Sbjct: 847  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDAKDRKVVLFLSDCSCAKKFCKERAALA 906

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD  +L+ +N +   IL 
Sbjct: 907  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGQLERINISIQDILQ 966

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAVDE 1203
            KCQEV+  + +KKGHL ++ ++   ++ +C  +Q P  G L + PC+QFS+   +  + E
Sbjct: 967  KCQEVSGRYGKKKGHLCHLLKKITFATCDCSFTQMPISGKLHKVPCVQFSFSDESTVLSE 1026

Query: 1202 TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVV 1023
            ++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DAT+WV +  +  KGE ALE++
Sbjct: 1027 SVERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDATAWVKNTRKVSKGEPALEII 1086

Query: 1022 VQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKC 843
            V+K  A   GDAWR  +DACLPV+ LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS  
Sbjct: 1087 VEKDHAVSNGDAWRTTIDACLPVLDLIDTRRSIPYGIQQVKELIGISCAFDQVVQRLSST 1146

Query: 842  IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFE 663
            ++MV+KGV+K+HL+LV N+MTCTG+LIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE
Sbjct: 1147 VKMVNKGVLKDHLILVANSMTCTGSLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFE 1206

Query: 662  RAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR 483
            +AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W +  Q+  N+D G  +YD LA VR
Sbjct: 1207 KAAEKCDSDSLGCVVSSSSWGKHAAVGTGSSFQILWNE-NQLKSNKDYGDGLYDFLALVR 1265

Query: 482  EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCA 303
              QEK   G     D++  L++   DDM LSPEP+    KPTFE  D+ E    +     
Sbjct: 1266 TDQEK--TGYMFLDDVDYLLEENAIDDMCLSPEPDGTVGKPTFE--DNFEEQNIQKGSSW 1321

Query: 302  DNG--NKSNWENVSPTVVESDNWQAWGSKDKTSADNGNK-SRWEKVSPTAVESDNWQPW- 135
            +NG   KS+WE  +    +S +W  W S    SA   ++ + WE  +     S +W  W 
Sbjct: 1322 ENGITMKSSWEQDASAANDSGDWGGWSSGGGASAKPADQDNSWEVHAKVQDNSTDWGGWS 1381

Query: 134  ---GSKAKPSADSGNKSSWEKASPAVIESNSQWG--RKEKPSAD 18
               G+ AKP AD  N  SWE  + A  ++ + WG    +KP+ +
Sbjct: 1382 SGVGAAAKP-ADQDN--SWEVHAKAQ-DNCTDWGGWSTDKPTGE 1421


>gb|AQK60578.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1916

 Score =  708 bits (1828), Expect = 0.0
 Identities = 372/734 (50%), Positives = 490/734 (66%), Gaps = 36/734 (4%)
 Frame = -1

Query: 2096 YSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISAREVIIRSSRGLTEPGIL 1917
            +++FV+K+    D+   EAYGLV+SS  HGL P+E  +H+IS RE +IRSSRGL+EPG L
Sbjct: 711  FTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAISTREAMIRSSRGLSEPGTL 770

Query: 1916 FKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESVSVSPAGEPVGVLAATAIST 1737
            FKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y  D+  +S SV P GEPVGVLAATAIS 
Sbjct: 771  FKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSVVPPGEPVGVLAATAISN 830

Query: 1736 PAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAALA 1557
            PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AALA
Sbjct: 831  PAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAALA 890

Query: 1556 VQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILH 1377
            VQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  IL 
Sbjct: 891  VQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQ 950

Query: 1376 KCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DET 1200
            KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  E+
Sbjct: 951  KCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSES 1010

Query: 1199 LEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVV 1020
            +E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE++V
Sbjct: 1011 IERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIV 1070

Query: 1019 QKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCI 840
            +K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS  +
Sbjct: 1071 EKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTV 1130

Query: 839  RMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFER 660
            +MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+
Sbjct: 1131 KMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEK 1190

Query: 659  AAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVRE 480
            AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA VR 
Sbjct: 1191 AAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRT 1249

Query: 479  PQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFEDYDSCEAWGWKGKPCAD 300
             QEK         D++  +++   DDM LSPEP+    KPTFE  D+ E    +     +
Sbjct: 1250 DQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE--DNFEEQNIQKGSSWE 1305

Query: 299  NG--NKSNWENVSPTVVESDNWQAWGS---------------------KDKTSADNGNKS 189
             G    S+WE  +    +S +W  W S                     +D ++ D G   
Sbjct: 1306 IGITTNSSWEQNASVANDSGDWGGWSSGGGAAAKPADQDNSWEVHAKVQDNSTTDWGG-- 1363

Query: 188  RWEKVSPTA--------VESDNWQPWGSKAKPSADSGN--KSSWEKASPAVIESNSQWGR 39
             W    PT          E+D W   G+K +  A  GN  KSS  +AS     S + W +
Sbjct: 1364 -WSVEKPTGEATVSGEPAETDTWADKGAKMESDAGDGNWEKSSTPEASKKNDSSENTWDK 1422

Query: 38   KEKPSADN--GNKS 3
            ++    D   GN+S
Sbjct: 1423 RKGDGGDGAWGNRS 1436