BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00006919
         (1186 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   653   0.0  
ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   653   0.0  
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   528   e-168
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   528   e-168
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   528   e-168
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   528   e-168
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   515   e-164
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   497   e-159
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   497   e-158
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   497   e-158
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   497   e-158
gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria ital...   469   e-157
gb|AQK94718.1| Protein RNA-directed DNA methylation 3, partial [...   458   e-156
gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [...   457   e-156
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   489   e-156
gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]      458   e-153
gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]      458   e-150
gb|AQK94722.1| Protein RNA-directed DNA methylation 3 [Zea mays]      458   e-150
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   476   e-150
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   473   e-149

>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  653 bits (1684), Expect = 0.0
 Identities = 326/395 (82%), Positives = 358/395 (90%), Gaps = 1/395 (0%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VG+EQQ+VL LMHKYADLQRLGTKM+IISAF LEHVKGYVYIEADKACDVVEACKGFFNI
Sbjct: 102  VGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEADKACDVVEACKGFFNI 161

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y+TRMGLVP+ EIPHLLS RNK C +SKGTWVRMK+GNYKGDLGQVVDYDD RK+ATIKL
Sbjct: 162  YSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKL 221

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPRIDLQAIAKK+GGGVSLKEA VP PRLISS ELE FRSHIEIRRDRH+GE FEILDGL
Sbjct: 222  VPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEILDGL 281

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGYLYKKVSIASIV+WGV+PSKDELLKFTEMSK EEEDVSWLSSVYN RKK+K S+ 
Sbjct: 282  MLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKD 341

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDG-IKILKGDTAGQEVMTIKFEDIKS 288
            +D+KG+SE+GN FNLHDLVLFGRK FGVIID+GKDG +K+L+GD  GQEV+T+K E IKS
Sbjct: 342  SDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKS 401

Query: 287  RCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFC 108
            +CVDKMFTASDRHRKTI IND +KV +GPLEGR+GT  HMYKGTLFIYDE+QE NSG+FC
Sbjct: 402  QCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFC 461

Query: 107  AKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
             KSDLCE ITP KD SF K GNK+SSSF+Q PV S
Sbjct: 462  TKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVIS 494


>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  653 bits (1684), Expect = 0.0
 Identities = 326/395 (82%), Positives = 358/395 (90%), Gaps = 1/395 (0%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VG+EQQ+VL LMHKYADLQRLGTKM+IISAF LEHVKGYVYIEADKACDVVEACKGFFNI
Sbjct: 121  VGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEADKACDVVEACKGFFNI 180

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y+TRMGLVP+ EIPHLLS RNK C +SKGTWVRMK+GNYKGDLGQVVDYDD RK+ATIKL
Sbjct: 181  YSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKL 240

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPRIDLQAIAKK+GGGVSLKEA VP PRLISS ELE FRSHIEIRRDRH+GE FEILDGL
Sbjct: 241  VPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEILDGL 300

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGYLYKKVSIASIV+WGV+PSKDELLKFTEMSK EEEDVSWLSSVYN RKK+K S+ 
Sbjct: 301  MLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKD 360

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDG-IKILKGDTAGQEVMTIKFEDIKS 288
            +D+KG+SE+GN FNLHDLVLFGRK FGVIID+GKDG +K+L+GD  GQEV+T+K E IKS
Sbjct: 361  SDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKS 420

Query: 287  RCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFC 108
            +CVDKMFTASDRHRKTI IND +KV +GPLEGR+GT  HMYKGTLFIYDE+QE NSG+FC
Sbjct: 421  QCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFC 480

Query: 107  AKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
             KSDLCE ITP KD SF K GNK+SSSF+Q PV S
Sbjct: 481  TKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVIS 513


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  528 bits (1360), Expect = e-168
 Identities = 252/393 (64%), Positives = 313/393 (79%)
 Frame = -3

Query: 1181 GREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNIY 1002
            GRE+Q+  C M KY DL   G+KM+IISAFAL+HVKGYV+IEADK CD++EACKGF+++Y
Sbjct: 160  GRERQIAFCFMQKYIDLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVY 219

Query: 1001 ATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKLV 822
            ++++  VP +E+P L S+R+K C +S+G+WVRMK+G YKGDL QVV  DD +K+  +KL+
Sbjct: 220  SSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLI 279

Query: 821  PRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLM 642
            PR+DLQAI+KK+GGG+SLK+A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLM
Sbjct: 280  PRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLM 339

Query: 641  LKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEAA 462
            LKDG+LYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SEAA
Sbjct: 340  LKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAA 399

Query: 461  DVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRC 282
            D K  +++GNGFNLHD VLFG K FGVII + KDG +ILKG   G EV+T+K +DIKS C
Sbjct: 400  DQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSAC 459

Query: 281  VDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAK 102
            VDKMFTASDR+ KTI IND+VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAK
Sbjct: 460  VDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAK 519

Query: 101  SDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
            S  CEN+   K       G KSS SF Q P+RS
Sbjct: 520  SASCENLKELK-------GEKSSHSFFQPPMRS 545


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  528 bits (1360), Expect = e-168
 Identities = 252/393 (64%), Positives = 313/393 (79%)
 Frame = -3

Query: 1181 GREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNIY 1002
            GRE+Q+  C M KY DL   G+KM+IISAFAL+HVKGYV+IEADK CD++EACKGF+++Y
Sbjct: 160  GRERQIAFCFMQKYIDLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVY 219

Query: 1001 ATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKLV 822
            ++++  VP +E+P L S+R+K C +S+G+WVRMK+G YKGDL QVV  DD +K+  +KL+
Sbjct: 220  SSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLI 279

Query: 821  PRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLM 642
            PR+DLQAI+KK+GGG+SLK+A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLM
Sbjct: 280  PRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLM 339

Query: 641  LKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEAA 462
            LKDG+LYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SEAA
Sbjct: 340  LKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAA 399

Query: 461  DVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRC 282
            D K  +++GNGFNLHD VLFG K FGVII + KDG +ILKG   G EV+T+K +DIKS C
Sbjct: 400  DQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSAC 459

Query: 281  VDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAK 102
            VDKMFTASDR+ KTI IND+VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAK
Sbjct: 460  VDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAK 519

Query: 101  SDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
            S  CEN+   K       G KSS SF Q P+RS
Sbjct: 520  SASCENLKELK-------GEKSSHSFFQPPMRS 545


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  528 bits (1360), Expect = e-168
 Identities = 252/393 (64%), Positives = 313/393 (79%)
 Frame = -3

Query: 1181 GREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNIY 1002
            GRE+Q+  C M KY DL   G+KM+IISAFAL+HVKGYV+IEADK CD++EACKGF+++Y
Sbjct: 162  GRERQIAFCFMQKYIDLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVY 221

Query: 1001 ATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKLV 822
            ++++  VP +E+P L S+R+K C +S+G+WVRMK+G YKGDL QVV  DD +K+  +KL+
Sbjct: 222  SSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLI 281

Query: 821  PRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLM 642
            PR+DLQAI+KK+GGG+SLK+A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLM
Sbjct: 282  PRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLM 341

Query: 641  LKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEAA 462
            LKDG+LYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SEAA
Sbjct: 342  LKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAA 401

Query: 461  DVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRC 282
            D K  +++GNGFNLHD VLFG K FGVII + KDG +ILKG   G EV+T+K +DIKS C
Sbjct: 402  DQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSAC 461

Query: 281  VDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAK 102
            VDKMFTASDR+ KTI IND+VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAK
Sbjct: 462  VDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAK 521

Query: 101  SDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
            S  CEN+   K       G KSS SF Q P+RS
Sbjct: 522  SASCENLKELK-------GEKSSHSFFQPPMRS 547


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  528 bits (1360), Expect = e-168
 Identities = 252/393 (64%), Positives = 313/393 (79%)
 Frame = -3

Query: 1181 GREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNIY 1002
            GRE+Q+  C M KY DL   G+KM+IISAFAL+HVKGYV+IEADK CD++EACKGF+++Y
Sbjct: 162  GRERQIAFCFMQKYIDLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVY 221

Query: 1001 ATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKLV 822
            ++++  VP +E+P L S+R+K C +S+G+WVRMK+G YKGDL QVV  DD +K+  +KL+
Sbjct: 222  SSKINRVPGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLI 281

Query: 821  PRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLM 642
            PR+DLQAI+KK+GGG+SLK+A VP PRLISS ELE FR HIE+RRDR TGE F+ILDGLM
Sbjct: 282  PRVDLQAISKKFGGGISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLM 341

Query: 641  LKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEAA 462
            LKDG+LYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+SSVY  R KM+ SEAA
Sbjct: 342  LKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAA 401

Query: 461  DVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRC 282
            D K  +++GNGFNLHD VLFG K FGVII + KDG +ILKG   G EV+T+K +DIKS C
Sbjct: 402  DQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSAC 461

Query: 281  VDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCAK 102
            VDKMFTASDR+ KTI IND+VKV +GPL+ R+G VRHMYKGTLFIYDEN+ ENSG FCAK
Sbjct: 462  VDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAK 521

Query: 101  SDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
            S  CEN+   K       G KSS SF Q P+RS
Sbjct: 522  SASCENLKELK-------GEKSSHSFFQPPMRS 547


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  515 bits (1327), Expect = e-164
 Identities = 248/394 (62%), Positives = 311/394 (78%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+Q+  C M KY DL   G K++IISAFAL+HVKGYV+IEADK  DV EACKGF+++
Sbjct: 157  VGRERQIAFCFMQKYIDLNNFGNKIQIISAFALDHVKGYVFIEADKEYDVTEACKGFYSV 216

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y++++  V  +E+P L S+R+K C +S+G+WVRMK+G YKGDL QVV  DD +K+  +KL
Sbjct: 217  YSSKINRVHGSEVPQLFSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKL 276

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPR+DLQAI+KK+GGGVSLK+A VP PRLISS ELE FR HIE+RRDR TGE FEILDGL
Sbjct: 277  VPRVDLQAISKKFGGGVSLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFEILDGL 336

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDG+LYK+VSI S++ WGVQPS  ELLKF+ + K  +E ++W+SSVY+ R KM+ +EA
Sbjct: 337  MLKDGFLYKRVSIGSVICWGVQPSDMELLKFSSVGKDGDEHLNWVSSVYHGRNKMRPTEA 396

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
            AD +  +++GNGFNLHD VLFG K FGVII + KDG +ILKG   G EV+T+K +DIKS 
Sbjct: 397  ADQQVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGVEGPEVVTVKIQDIKSA 456

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTASDR+ KTI IND+VKV +GPL+ ++G V+HMYKGTLFIYDEN+ ENSG FCA
Sbjct: 457  CVDKMFTASDRYMKTISINDTVKVLEGPLQDKQGIVKHMYKGTLFIYDENETENSGFFCA 516

Query: 104  KSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRS 3
            KS  CEN+   K       G KSS SF+Q+P+ S
Sbjct: 517  KSASCENMKESK-------GEKSSHSFSQAPMGS 543


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  497 bits (1280), Expect = e-159
 Identities = 241/397 (60%), Positives = 310/397 (78%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            +GRE+QM  C M K+ DL  LG K++I+SAFAL+HVKG+V++EADKA DV EACKGF NI
Sbjct: 156  IGRERQMAFCFMQKFVDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNI 215

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y  R+ LVP +E+ HLLS+RNK C IS+G+WVRMK+G YKGDL QVV+ DD RKR  IKL
Sbjct: 216  YPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKL 275

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PRIDLQAI+KK+GGG+SLK A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+
Sbjct: 276  IPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGM 335

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGY+YK VS  S+VFWGVQPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ 
Sbjct: 336  MLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDD 395

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
            +D    + + N + LHDLVLFG+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS 
Sbjct: 396  SDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSG 455

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTA DRH KTI +ND VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCA
Sbjct: 456  CVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCA 515

Query: 104  KSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRS 3
            KS+ CE I   ++S  SF    G+ S+S F++ P  S
Sbjct: 516  KSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTIS 552


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  497 bits (1279), Expect = e-158
 Identities = 241/398 (60%), Positives = 310/398 (77%), Gaps = 4/398 (1%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            +GRE+QM  C M K+ DL  LG K++I+SAFAL+HVKG+V++EADKA DV EACKGF NI
Sbjct: 156  IGRERQMAFCFMQKFVDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNI 215

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y  R+ LVP +E+ HLLS+RNK C IS+G+WVRMK+G YKGDL QVV+ DD RKR  IKL
Sbjct: 216  YPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKL 275

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PRIDLQAI+KK+GGG+SLK A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+
Sbjct: 276  IPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGM 335

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGY+YK VS  S+VFWGVQPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ 
Sbjct: 336  MLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDD 395

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
            +D    + + N + LHDLVLFG+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS 
Sbjct: 396  SDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSG 455

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTA DRH KTI +ND VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCA
Sbjct: 456  CVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCA 515

Query: 104  KSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRS 3
            KS+ CE I   ++S  SF     G+ S+S F++ P  S
Sbjct: 516  KSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTIS 553


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  497 bits (1279), Expect = e-158
 Identities = 241/398 (60%), Positives = 310/398 (77%), Gaps = 4/398 (1%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            +GRE+QM  C M K+ DL  LG K++I+SAFAL+HVKG+V++EADKA DV EACKGF NI
Sbjct: 156  IGRERQMAFCFMQKFVDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNI 215

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y  R+ LVP +E+ HLLS+RNK C IS+G+WVRMK+G YKGDL QVV+ DD RKR  IKL
Sbjct: 216  YPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKL 275

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PRIDLQAI+KK+GGG+SLK A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+
Sbjct: 276  IPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGM 335

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGY+YK VS  S+VFWGVQPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ 
Sbjct: 336  MLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDD 395

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
            +D    + + N + LHDLVLFG+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS 
Sbjct: 396  SDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSG 455

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTA DRH KTI +ND VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCA
Sbjct: 456  CVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCA 515

Query: 104  KSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRS 3
            KS+ CE I   ++S  SF     G+ S+S F++ P  S
Sbjct: 516  KSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTIS 553


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  497 bits (1279), Expect = e-158
 Identities = 241/398 (60%), Positives = 310/398 (77%), Gaps = 4/398 (1%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            +GRE+QM  C M K+ DL  LG K++I+SAFAL+HVKG+V++EADKA DV EACKGF NI
Sbjct: 156  IGRERQMAFCFMQKFVDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNI 215

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y  R+ LVP +E+ HLLS+RNK C IS+G+WVRMK+G YKGDL QVV+ DD RKR  IKL
Sbjct: 216  YPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKL 275

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PRIDLQAI+KK+GGG+SLK A VP PRLISS EL+ FR  IE RRDR +GE FE+LDG+
Sbjct: 276  IPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGM 335

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGY+YK VS  S+VFWGVQPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ 
Sbjct: 336  MLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDD 395

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
            +D    + + N + LHDLVLFG+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS 
Sbjct: 396  SDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSG 455

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTA DRH KTI +ND VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCA
Sbjct: 456  CVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCA 515

Query: 104  KSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRS 3
            KS+ CE I   ++S  SF     G+ S+S F++ P  S
Sbjct: 516  KSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTIS 553


>gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria italica]
          Length = 711

 Score =  469 bits (1208), Expect = e-157
 Identities = 227/394 (57%), Positives = 300/394 (76%), Gaps = 19/394 (4%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M K+ DLQ++GTK+ II+AFAL+HV+G+V++EA+KACDV EACKGF ++
Sbjct: 170  VGRERQMAFCFMQKFVDLQKIGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSV 229

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            YA+R+  VP+ E+P LLS+R KP  IS+GTWVRMKNGNYKGDL QVV  DD RKR  IK+
Sbjct: 230  YASRIISVPAAEVPSLLSSRTKPFEISRGTWVRMKNGNYKGDLAQVVSEDDGRKRVLIKI 289

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PR+DL AI++KYGG +SLKEA VP PRLISSQELE FR HIE++RDR TGE FE+LDGL
Sbjct: 290  IPRVDLHAISRKYGGAISLKEAVVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGL 349

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK----- 486
            M KDG+LYK+V+++S+++WG+QP++ ELLKF+   +++A  +D+ W+SS+Y  +K     
Sbjct: 350  MFKDGFLYKRVALSSLIYWGIQPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNLPA 409

Query: 485  ---------KMKSSEAADVKGASE---QGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILK 342
                     K KSS+A+    ++E     + FNLHDLVLFGRK FGVII + KDG++ILK
Sbjct: 410  ERGIKSPSSKTKSSKASKASTSTENYDDNDEFNLHDLVLFGRKDFGVIIAIEKDGLRILK 469

Query: 341  GDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYK 162
            G   G  V T+K +DIK  CVDKMFTA DR +K I IND+V V +GP +G++G V+H+Y 
Sbjct: 470  GGPEGSAV-TVKKQDIKKGCVDKMFTAVDRQKKIISINDTVNVLEGPFQGKQGVVKHLYM 528

Query: 161  GTLFIYDENQEENSGLFCAKSDLCENITPPKDSS 60
            GTLFIY+E++ EN G FCA+   CEN+   K+SS
Sbjct: 529  GTLFIYNESESENCGFFCAQCGSCENVKKRKESS 562


>gb|AQK94718.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  458 bits (1179), Expect = e-156
 Identities = 221/408 (54%), Positives = 302/408 (74%), Gaps = 21/408 (5%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M K+ DL+++GTK+ II+AFAL+H++G+V++EA+KACDV EACKGF ++
Sbjct: 17   VGRERQMAFCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSV 76

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y +R+  VP+ E+P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  DD RK+  IK+
Sbjct: 77   YTSRITSVPAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKI 136

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPR+DL AI+KK+GG VSLK A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGL
Sbjct: 137  VPRVDLHAISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGL 196

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK----- 486
            M KDG+LYKKV+++S+++WG+QP++ ELLKF+    ++A  +D+ WLS +Y ++K     
Sbjct: 197  MFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPE 256

Query: 485  ---------KMKSSEAADVKGAS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKI 348
                     K++SS+A+D+K ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +I
Sbjct: 257  KRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRI 316

Query: 347  LKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHM 168
            LKG   G  V  ++ +DIK  CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+
Sbjct: 317  LKGGPEGSAV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHL 375

Query: 167  YKGTLFIYDENQEENSGLFCAKSDLCENITPPKDSSFRKGGNKSSSSF 24
            Y G LFIY+E++ EN G FCA+S  CE I     SS  +  + ++  F
Sbjct: 376  YLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF 423


>gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  457 bits (1177), Expect = e-156
 Identities = 222/410 (54%), Positives = 303/410 (73%), Gaps = 21/410 (5%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M K+ DL+++GTK+ II+AFAL+H++G+V++EA+KA  V EACKGF ++
Sbjct: 17   VGRERQMAFCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKAGYVTEACKGFCSV 76

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y +R+  VP+ E+P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV+ D  RK+  IK+
Sbjct: 77   YTSRITSVPATEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVNMDSGRKKVMIKI 136

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PR+DL AI+KK+GG VSLKEA VP PRLISSQELE FR HIEI+RDR TGE FE+LDGL
Sbjct: 137  IPRVDLHAISKKFGGAVSLKEAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGL 196

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK----- 486
            M KDG+LYKKV+++S+++WG+QP++ ELLKF+    ++A  +D+ WLS +Y ++K     
Sbjct: 197  MFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPA 256

Query: 485  ---------KMKSSEAADVKGAS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKI 348
                     K+KSS+A D+KG++     +  + FNLHDLVL+GRK FGVII + KDG +I
Sbjct: 257  ERDMKSSSSKIKSSKAPDLKGSTSTENYDDNDEFNLHDLVLYGRKDFGVIIAVEKDGFRI 316

Query: 347  LKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHM 168
            LKG   G  V T++ +DIK  CVDKMFTA D H+KTI IND+V V +GP +G++G V+H+
Sbjct: 317  LKGGPEGSAV-TVRKQDIKKGCVDKMFTAVDHHKKTISINDTVNVVEGPFQGKQGLVKHL 375

Query: 167  YKGTLFIYDENQEENSGLFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQ 18
            Y G LFI++E++ EN G FCA+S  CE I     SS  +  +  +  F++
Sbjct: 376  YLGILFIFNESESENCGFFCAQSGSCEKIRKGLGSSTTENSDFPTPMFSE 425


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  489 bits (1260), Expect = e-156
 Identities = 240/397 (60%), Positives = 308/397 (77%), Gaps = 3/397 (0%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            +GRE+QM  C M K+ DL  LG K++I+SAFAL+HVKG+V++EADKA DV EACKGF NI
Sbjct: 156  IGRERQMAFCFMQKFVDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNI 215

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y  R+ LVP +E+ HLLS+RNK C IS+G+WVRMK+G YKGDL QVV+ DD RKR  IKL
Sbjct: 216  YPGRINLVPPSEVSHLLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKL 275

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            +PRIDLQAI+KK+GGG+SLK A VP PRLISS ELE     IE RRDR +GE FE+LDG+
Sbjct: 276  IPRIDLQAISKKFGGGLSLKHAAVPAPRLISSHELEPL---IETRRDRQSGEVFEVLDGM 332

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGY+YK VS  S+VFWGVQPS+ ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ 
Sbjct: 333  MLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDD 392

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
            +D    + + N + LHDLVLFG+K FGVI+ + KDG++ILKG T G  V+T++ +DIKS 
Sbjct: 393  SDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSG 452

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTA DRH KTI +ND VKV +G LEGR+G V+H+Y+G++FIYDEN+ ENSG FCA
Sbjct: 453  CVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCA 512

Query: 104  KSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRS 3
            KS+ CE I   ++S  SF    G+ S+S F++ P  S
Sbjct: 513  KSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTIS 549


>gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 748

 Score =  458 bits (1179), Expect = e-153
 Identities = 221/408 (54%), Positives = 302/408 (74%), Gaps = 21/408 (5%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M K+ DL+++GTK+ II+AFAL+H++G+V++EA+KACDV EACKGF ++
Sbjct: 166  VGRERQMAFCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSV 225

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y +R+  VP+ E+P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  DD RK+  IK+
Sbjct: 226  YTSRITSVPAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKI 285

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPR+DL AI+KK+GG VSLK A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGL
Sbjct: 286  VPRVDLHAISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGL 345

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK----- 486
            M KDG+LYKKV+++S+++WG+QP++ ELLKF+    ++A  +D+ WLS +Y ++K     
Sbjct: 346  MFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPE 405

Query: 485  ---------KMKSSEAADVKGAS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKI 348
                     K++SS+A+D+K ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +I
Sbjct: 406  KRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRI 465

Query: 347  LKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHM 168
            LKG   G  V  ++ +DIK  CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+
Sbjct: 466  LKGGPEGSAV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHL 524

Query: 167  YKGTLFIYDENQEENSGLFCAKSDLCENITPPKDSSFRKGGNKSSSSF 24
            Y G LFIY+E++ EN G FCA+S  CE I     SS  +  + ++  F
Sbjct: 525  YLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF 572


>gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 925

 Score =  458 bits (1179), Expect = e-150
 Identities = 221/408 (54%), Positives = 302/408 (74%), Gaps = 21/408 (5%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M K+ DL+++GTK+ II+AFAL+H++G+V++EA+KACDV EACKGF ++
Sbjct: 17   VGRERQMAFCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSV 76

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y +R+  VP+ E+P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  DD RK+  IK+
Sbjct: 77   YTSRITSVPAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKI 136

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPR+DL AI+KK+GG VSLK A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGL
Sbjct: 137  VPRVDLHAISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGL 196

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK----- 486
            M KDG+LYKKV+++S+++WG+QP++ ELLKF+    ++A  +D+ WLS +Y ++K     
Sbjct: 197  MFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPE 256

Query: 485  ---------KMKSSEAADVKGAS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKI 348
                     K++SS+A+D+K ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +I
Sbjct: 257  KRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRI 316

Query: 347  LKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHM 168
            LKG   G  V  ++ +DIK  CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+
Sbjct: 317  LKGGPEGSAV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHL 375

Query: 167  YKGTLFIYDENQEENSGLFCAKSDLCENITPPKDSSFRKGGNKSSSSF 24
            Y G LFIY+E++ EN G FCA+S  CE I     SS  +  + ++  F
Sbjct: 376  YLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF 423


>gb|AQK94722.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 967

 Score =  458 bits (1179), Expect = e-150
 Identities = 221/408 (54%), Positives = 302/408 (74%), Gaps = 21/408 (5%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M K+ DL+++GTK+ II+AFAL+H++G+V++EA+KACDV EACKGF ++
Sbjct: 17   VGRERQMAFCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSV 76

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y +R+  VP+ E+P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  DD RK+  IK+
Sbjct: 77   YTSRITSVPAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKI 136

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPR+DL AI+KK+GG VSLK A VP PRLISSQELE FR HIEI+RDR TGE FE+LDGL
Sbjct: 137  VPRVDLHAISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGL 196

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTE--MSKAEEEDVSWLSSVYNARK----- 486
            M KDG+LYKKV+++S+++WG+QP++ ELLKF+    ++A  +D+ WLS +Y ++K     
Sbjct: 197  MFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPE 256

Query: 485  ---------KMKSSEAADVKGAS-----EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKI 348
                     K++SS+A+D+K ++     ++ + FNLHDLVL+GRK FGVI+ + KDG +I
Sbjct: 257  KRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRI 316

Query: 347  LKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHM 168
            LKG   G  V  ++ +DIK  CVDKMFTA D  +KTI IND+V V +GP +G++G V+H+
Sbjct: 317  LKGGPEGSAV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHL 375

Query: 167  YKGTLFIYDENQEENSGLFCAKSDLCENITPPKDSSFRKGGNKSSSSF 24
            Y G LFIY+E++ EN G FCA+S  CE I     SS  +  + ++  F
Sbjct: 376  YLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF 423


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  476 bits (1225), Expect = e-150
 Identities = 238/417 (57%), Positives = 294/417 (70%), Gaps = 24/417 (5%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            +GRE+Q   CLM K+ DLQ++G K++I S F+L+HVKG+ Y+EAD+AC+V EAC G   +
Sbjct: 160  MGRERQAAFCLMQKFVDLQKIGKKLQIFSVFSLDHVKGFFYVEADRACNVFEACNGLCIL 219

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y +R+ LVP NE P+LLS + K C I KG WVRMKNG YKGDL +VV  +DA+KR TIKL
Sbjct: 220  YPSRIELVPRNEAPNLLSIQRKACGIVKGMWVRMKNGKYKGDLAEVVLVNDAKKRVTIKL 279

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPRIDLQAI+KK+GGG SLK A +P PRLISS ELE FR HIE+RRDR TGE FE+LDGL
Sbjct: 280  VPRIDLQAISKKFGGGTSLKAAAIPAPRLISSHELEDFRPHIEVRRDRETGEIFEVLDGL 339

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKM----- 480
            MLKDGYLYKKVS+ S++ WGVQP+ DEL+KF E+ K E +DV WLSS+Y AR K      
Sbjct: 340  MLKDGYLYKKVSMGSLIHWGVQPTSDELMKFEELDKDEVKDVDWLSSIYKARMKKKLPET 399

Query: 479  -------------------KSSEAADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDG 357
                               K  E ++ K A +Q NGF++ DLVLFG+K  G+IID   D 
Sbjct: 400  SHQKNGEKYNQKDGEKSNPKVGEKSNQKDADKQINGFDIDDLVLFGKKSCGIIIDKENDT 459

Query: 356  IKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTV 177
             K+LKGD  G EV++I    IK  CVDK+FTA+DR  KTI I+D VKV +GPLEGREG V
Sbjct: 460  FKVLKGDVNGSEVVSINIRVIKKICVDKVFTATDRCMKTISIDDVVKVFEGPLEGREGIV 519

Query: 176  RHMYKGTLFIYDENQEENSGLFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVR 6
            RHMYKG LFIYDE Q EN+G FCA S +C+ +   +D    K   ++  SF QSP+R
Sbjct: 520  RHMYKGVLFIYDECQSENNGFFCANSGICDLVKKSRDLGGGKLSTRAGPSFAQSPIR 576


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  473 bits (1218), Expect = e-149
 Identities = 233/396 (58%), Positives = 301/396 (76%), Gaps = 2/396 (0%)
 Frame = -3

Query: 1184 VGREQQMVLCLMHKYADLQRLGTKMEIISAFALEHVKGYVYIEADKACDVVEACKGFFNI 1005
            VGRE+QM  C M KY +L+ LGTK++I S FALEHVKGYV++EADK  DV+EACKGF ++
Sbjct: 155  VGRERQMTFCFMQKYVELENLGTKLQISSVFALEHVKGYVFVEADKLYDVIEACKGFCSV 214

Query: 1004 YATRMGLVPSNEIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDDARKRATIKL 825
            Y++R+ +VP +E+PHLL+ RNK   +  G  VR+K+G YKGDL QVV  DD +K+ TIKL
Sbjct: 215  YSSRINIVPRSEVPHLLAIRNKLPEVCTGKLVRLKSGKYKGDLAQVVAVDDGQKQLTIKL 274

Query: 824  VPRIDLQAIAKKYGGGVSLKEAGVPVPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGL 645
            VPRIDLQAIAKK+GGG+SLK A VP PRLISS ELE FR HIE++RDR TGE FE+LDG+
Sbjct: 275  VPRIDLQAIAKKFGGGISLKLAAVPAPRLISSHELESFRPHIEVKRDRLTGELFEVLDGM 334

Query: 644  MLKDGYLYKKVSIASIVFWGVQPSKDELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSEA 465
            MLKDGYL+KKVS  S++F GVQPS  ELL F++++    ED++W+SS+YNARKK   +E 
Sbjct: 335  MLKDGYLFKKVSTGSVIFSGVQPSSSELLMFSDVTNNMVEDLNWVSSIYNARKKKPGAEI 394

Query: 464  ADVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSR 285
             D + +    N + LHDLVLFG+K +GVII + KD  KILKGD  G+ V+T+K +DIK+ 
Sbjct: 395  LDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKILKGDIEGENVVTVKIQDIKNS 454

Query: 284  CVDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKGTLFIYDENQEENSGLFCA 105
            CVDKMFTA D  + TI+IND VK+  GPL+GREG V+HMYKGTLFI+ E + +NSG F  
Sbjct: 455  CVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSV 514

Query: 104  KSDLCENITPPKDSSFRKG--GNKSSSSFNQSPVRS 3
            KS  CE +   K+S   K   G ++++SF+QSP+R+
Sbjct: 515  KSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRT 550