BLASTX nr result

ID: Ophiopogon22_contig00006307 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00006307
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing ...    84   7e-16
gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagu...    84   9e-16

>ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing peptidase 1,
           chloroplastic-like [Asparagus officinalis]
          Length = 408

 Score = 84.0 bits (206), Expect = 7e-16
 Identities = 67/169 (39%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
 Frame = +3

Query: 12  PPSSKASTLAGDR-------KPKAQATHSPA--KYTTLAGSNHSVVPKGSKPASLTVSLI 164
           P SSK S   GDR       K KAQA H+PA  KY+TLA       PKGS+PA++TVSLI
Sbjct: 62  PQSSKFSCFTGDRTRSTAQEKSKAQA-HAPATVKYSTLA-------PKGSRPANITVSLI 113

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSFLPFLQGNKWFPCSEFTAGPSK-SVKD 341
                                        KPS FLPFLQ NKWFPCSEF  G S+   +D
Sbjct: 114 SAVVSGSGAGSNVGLGVFGVSSSIGLGGLKPSYFLPFLQPNKWFPCSEFVPGSSRGGFED 173

Query: 342 KEVTVSVSVDTSRXXXXXXXXXXXXXXXXXXXPNLNGLQRKDGNLGCWF 488
           KE   +V VD S                      +  LQRK+ NL  WF
Sbjct: 174 KE---AVGVDKS-GAKGSKSSMEASVEAVTVKEGVKELQRKNRNLSSWF 218


>gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagus officinalis]
          Length = 601

 Score = 84.0 bits (206), Expect = 9e-16
 Identities = 67/169 (39%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
 Frame = +3

Query: 12  PPSSKASTLAGDR-------KPKAQATHSPA--KYTTLAGSNHSVVPKGSKPASLTVSLI 164
           P SSK S   GDR       K KAQA H+PA  KY+TLA       PKGS+PA++TVSLI
Sbjct: 158 PQSSKFSCFTGDRTRSTAQEKSKAQA-HAPATVKYSTLA-------PKGSRPANITVSLI 209

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSFLPFLQGNKWFPCSEFTAGPSK-SVKD 341
                                        KPS FLPFLQ NKWFPCSEF  G S+   +D
Sbjct: 210 SAVVSGSGAGSNVGLGVFGVSSSIGLGGLKPSYFLPFLQPNKWFPCSEFVPGSSRGGFED 269

Query: 342 KEVTVSVSVDTSRXXXXXXXXXXXXXXXXXXXPNLNGLQRKDGNLGCWF 488
           KE   +V VD S                      +  LQRK+ NL  WF
Sbjct: 270 KE---AVGVDKS-GAKGSKSSMEASVEAVTVKEGVKELQRKNRNLSSWF 314


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