BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00006203
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17739.1| unnamed protein product [Coffea canephora]            189   1e-55
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   194   9e-55
emb|CDP17738.1| unnamed protein product [Coffea canephora]            189   5e-53
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   181   6e-50
ref|XP_018625891.1| PREDICTED: uncharacterized protein LOC108944...   157   2e-46
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote...   160   5e-46
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   161   8e-43
gb|PHU17199.1| hypothetical protein BC332_12894 [Capsicum chinense]   159   1e-42
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116...   149   2e-42
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            158   5e-42
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         158   7e-42
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                        158   7e-42
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        158   7e-42
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   158   7e-42
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     158   7e-42
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...   158   7e-42
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   157   8e-42
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   157   1e-41
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   157   1e-41
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   157   2e-41

>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  189 bits (481), Expect = 1e-55
 Identities = 93/161 (57%), Positives = 114/161 (70%), Gaps = 4/161 (2%)
 Frame = -3

Query: 473 MEHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASIDT----DEDASRL*HMRLGH 306
           M  G+LKVT G+LV++KG+R   LY+ QGS V G  AA+  +    D +A++L HMRLGH
Sbjct: 1   MRDGILKVTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGH 60

Query: 305 TGEXXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGS 126
            GE             G K CKL+FCEHCVLEK+ KVKFGT IH TKGILDYVH++VWG 
Sbjct: 61  AGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGP 120

Query: 125 SKNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           +K  SLGG  YFV+FIDD+SRR WV+TMK K EVLE F++W
Sbjct: 121 AKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKW 161


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  194 bits (492), Expect = 9e-55
 Identities = 91/161 (56%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
 Frame = -3

Query: 476 TMEHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASIDT---DEDASRL*HMRLGH 306
           TM  G+LK T G+LV++KG+   NLY+ QGSTV G +AA+  +   D +A++L HMRLGH
Sbjct: 307 TMRDGILKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGH 366

Query: 305 TGEXXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGS 126
            GE             G K CKL+FCEHCVL K+ +VKFGTAIH TKGILDYVH+DVWG 
Sbjct: 367 AGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGP 426

Query: 125 SKNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           +K  S+GG +YFV+F+DD+SRR WV+TMK+K++VLE F++W
Sbjct: 427 AKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKW 467


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  189 bits (479), Expect = 5e-53
 Identities = 92/161 (57%), Positives = 115/161 (71%), Gaps = 4/161 (2%)
 Frame = -3

Query: 473 MEHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTG----ALAASIDTDEDASRL*HMRLGH 306
           M  G+LKVT G+L+++KG+R  NLY+ QGSTV G    A ++S   D +A++L HMRLG 
Sbjct: 393 MRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGD 452

Query: 305 TGEXXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGS 126
            GE             G K CKL+FCEHCVLEK+ KVKFGT IH TKGILDYVH+DVWG 
Sbjct: 453 AGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGP 512

Query: 125 SKNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           +K  SLGG  YFV+FIDD+SRR WV+TMK K E+L+ F++W
Sbjct: 513 AKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKW 553


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  181 bits (460), Expect = 6e-50
 Identities = 89/159 (55%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
 Frame = -3

Query: 470 EHGVLKVTKGSLVVMKGIRDRN-LYFLQGSTVTG--ALAASIDTDEDASRL*HMRLGHTG 300
           E GV+K+  G+LVVMKG+R  N LY+ QG+T+ G  A+A+S + + ++++L HMRLGH G
Sbjct: 158 EGGVMKIISGALVVMKGVRKNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAG 217

Query: 299 EXXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSK 120
           E               + CKLDFCEHCV  KKT+VKFGTAIH TKGILDYVH+DVWG SK
Sbjct: 218 ERSLNLLMKQGLLKNIQACKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSK 277

Query: 119 NTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
             SL G +Y+V+F+DD+SRR WVY MK K EVL  F++W
Sbjct: 278 TASLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLGIFLKW 316


>ref|XP_018625891.1| PREDICTED: uncharacterized protein LOC108944919, partial [Nicotiana
           tomentosiformis]
          Length = 148

 Score =  157 bits (397), Expect = 2e-46
 Identities = 80/148 (54%), Positives = 103/148 (69%), Gaps = 3/148 (2%)
 Frame = -3

Query: 458 LKVTKGSLVVMKGIR-DRNLYFLQGSTVTGA--LAASIDTDEDASRL*HMRLGHTGEXXX 288
           +++  G+LVVMK  R + N+Y  +GSTV G   + +S D + +A+RL HMRLGH G    
Sbjct: 1   MRICSGALVVMKANRKNNNMYRYRGSTVIGTATVTSSDDKEVEATRLWHMRLGHAGGKSL 60

Query: 287 XXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNTSL 108
                     G KTC L+FCEHCV  K+ +VKFGTAIH TKGILDYV++D+WGSSK  SL
Sbjct: 61  KALSNQGLLKGVKTCNLEFCEHCVKGKQIRVKFGTAIHNTKGILDYVYSDIWGSSKIPSL 120

Query: 107 GGANYFVSFIDDYSRRNWVYTMKHKHEV 24
           GG +YFV+F+D++ RR WVYTMK K EV
Sbjct: 121 GGKHYFVTFVDNFFRRVWVYTMKRKDEV 148


>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
           [Trifolium pratense]
          Length = 285

 Score =  160 bits (406), Expect = 5e-46
 Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 3/160 (1%)
 Frame = -3

Query: 473 MEHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASIDTDED---ASRL*HMRLGHT 303
           +E+G LKV +GSLVVMKG+R RNLY L G TVTG LA  I+  +D    +R+ HMRLGH 
Sbjct: 9   LENGGLKVVRGSLVVMKGVRHRNLYTLMGETVTGDLAVGINRSKDQTECTRMWHMRLGHM 68

Query: 302 GEXXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSS 123
            E               +   ++FCEHCV  K  +++F ++ H+++GILDYVHTDVWG +
Sbjct: 69  SEKGLSLLGEKGLLKNMEKPCMEFCEHCVYGKAHRLRFSSSKHKSRGILDYVHTDVWGPA 128

Query: 122 KNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
             TS GG+ YFV+++DD+SR  W+Y +KHK+EV + F  W
Sbjct: 129 PVTSKGGSRYFVTYVDDHSRYAWIYFLKHKNEVFDNFKCW 168


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  161 bits (407), Expect = 8e-43
 Identities = 82/156 (52%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGA--LAASIDTDEDASRL*HMRLGHTGEXX 291
           GVL+V KGS +++KG+    LYFLQGSTVTG+  +A+S    +D ++L H+RLGH GE  
Sbjct: 366 GVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLGHMGERG 425

Query: 290 XXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNTS 111
                      G K   L+FCEHCV  K  + KF  AIHRTKG LDY+H+D WG  +  S
Sbjct: 426 MQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVES 485

Query: 110 LGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           LGG  +FVS IDDYSR  WVY MKHK E  +KF EW
Sbjct: 486 LGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEW 521


>gb|PHU17199.1| hypothetical protein BC332_12894 [Capsicum chinense]
          Length = 667

 Score =  159 bits (403), Expect = 1e-42
 Identities = 81/157 (51%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
 Frame = -3

Query: 467 HGVLKVTKGSLVVMKGI-RDRNLYFLQGSTVTGA--LAASIDTDEDASRL*HMRLGHTGE 297
           +G++K+   +LVVMK I ++ NLY   GST+ G   + +S+D + + +RL HMRL H G 
Sbjct: 511 NGLMKIYSDALVVMKAIQKNNNLYHYHGSTIIGTTTVTSSVDKEAEVTRLWHMRLAHAGG 570

Query: 296 XXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKN 117
                        GAK+  L+FCEHCV  K+T+VKFGT IH TKGILDY H+DVWG+SK 
Sbjct: 571 KSLKILSDQEFLKGAKSGNLEFCEHCVKGKQTRVKFGTTIHNTKGILDYEHSDVWGASKT 630

Query: 116 TSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVE 6
            SLGG +YF++F+ D+SRR WVYTMK K EVL  FV+
Sbjct: 631 PSLGGKHYFITFVYDFSRRVWVYTMKTKDEVLGIFVK 667


>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
           hassleriana]
          Length = 209

 Score =  149 bits (376), Expect = 2e-42
 Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
 Frame = -3

Query: 476 TMEHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALA--ASIDTDEDASRL*HMRLGHT 303
           T+  G+LKV  G+LVV+KG+R  NLY+ +GSTV G +A  A  D D + +RL HMRLGH 
Sbjct: 82  TIRDGILKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAVTAGEDKDSEVTRLWHMRLGHP 141

Query: 302 GEXXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSS 123
           GE             GA+ CKL+FCEHCVL K++KVKFGTAIH T+GILDY+H+DVWG +
Sbjct: 142 GEKALQNLVKQGVLKGARLCKLEFCEHCVLGKQSKVKFGTAIHNTEGILDYIHSDVWGPT 201

Query: 122 KNTSLGG 102
           + TSLGG
Sbjct: 202 RETSLGG 208


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  158 bits (400), Expect = 5e-42
 Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGEX 294
           G+LKVTKGSLVVMK  I+  NLY L+G+T+ G +AA  D+  + DA+ L HMRLGH  E 
Sbjct: 353 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEI 412

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                       G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG ++ T
Sbjct: 413 GLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 472

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GGA Y ++ +DDYSR+ W Y +KHK++  + F EW
Sbjct: 473 SFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 509


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  158 bits (400), Expect = 7e-42
 Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGEX 294
           G+LKVTKGSLVVMK  I+  NLY L+G+T+ G +AA  D+  + DA+ L HMRLGH  E 
Sbjct: 219 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEI 278

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                       G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG ++ T
Sbjct: 279 GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 338

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GGA Y ++ +DDYSR+ W Y +KHK++  + F EW
Sbjct: 339 SFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 375


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score =  158 bits (400), Expect = 7e-42
 Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGEX 294
           G+LKVTKGSLVVMK  I+  NLY L+G+T+ G +AA  D+  + DA+ L HMRLGH  E 
Sbjct: 219 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEI 278

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                       G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG ++ T
Sbjct: 279 GLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 338

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GGA Y ++ +DDYSR+ W Y +KHK++  + F EW
Sbjct: 339 SFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 375


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  158 bits (400), Expect = 7e-42
 Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGEX 294
           G+LKVTKGSLVVMK  I+  NLY LQG+T+ G +A   D+  + DA+ L HMRLGH  E 
Sbjct: 387 GILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEI 446

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                       G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG ++ T
Sbjct: 447 GLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 506

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GGA Y ++ +DDYSR+ W Y +KHK++    F EW
Sbjct: 507 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEW 543


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  158 bits (400), Expect = 7e-42
 Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGEX 294
           G+LKVTKGSLVVMK  I+  NLY L+G+T+ G +AA  D+  + DA+ L HMRLGH  E 
Sbjct: 348 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEI 407

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                       G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG ++ T
Sbjct: 408 GLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 467

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GGA Y ++ +DDYSR+ W Y +KHK++  + F EW
Sbjct: 468 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 504


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  158 bits (400), Expect = 7e-42
 Identities = 78/158 (49%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
 Frame = -3

Query: 467 HGVLKVTKGSLVVMK-GIRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGE 297
           +G+LKVTKGSLVVMK  I+  NLY L+G+T+ G +AA  D+  + DA+ L HMRLGH  E
Sbjct: 358 YGILKVTKGSLVVMKVDIKSANLYHLRGTTILGNVAAVFDSLSNSDATNLWHMRLGHMSE 417

Query: 296 XXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKN 117
                        G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG +  
Sbjct: 418 IGLAELSKRGLLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAHK 477

Query: 116 TSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           TS GGA Y ++ +DDYSR+ W Y +KHK++  + F EW
Sbjct: 478 TSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDGFKEW 515


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score =  158 bits (400), Expect = 7e-42
 Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASIDT--DEDASRL*HMRLGHTGEX 294
           G+LKVTKGSLVVMK  I+  NLY L+G+T+ G +AA  D+  + DA+ L HMRLGH  E 
Sbjct: 402 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEI 461

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                       G    KL FCEHC+  K  +VKF T+ H T+GILDYVH+D+WG ++ T
Sbjct: 462 GLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKT 521

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GGA Y ++ +DDYSR+ W Y +KHK++  + F EW
Sbjct: 522 SFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEW 558


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  157 bits (397), Expect = 8e-42
 Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470 EHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASID-TDEDASRL*HMRLGHTGEX 294
           E GVLKV+KG++V++K  R  +LY LQGS VTG+ A S   +D+DA++L HMRLGH  E 
Sbjct: 372 EGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEK 431

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                            KL+FCEHCV  K+ +V F TA HRTKG LDY+H+D+WG SK  
Sbjct: 432 GMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVP 491

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GG  Y ++ IDD+SR+ WVY ++HK+E    F +W
Sbjct: 492 SYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKW 528


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  157 bits (398), Expect = 1e-41
 Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
 Frame = -3

Query: 470  EHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGA--LAASIDTDEDASRL*HMRLGHTGE 297
            E GVLKV  G+L V++G  +R LYFL GS+VTG   +++S D D D ++L HMRLGH  E
Sbjct: 893  EGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSE 952

Query: 296  XXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKN 117
                         G  T KL+FCEHCV  K+T+VKF T IH+TKG +DY H+D+WG S  
Sbjct: 953  RGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPT 1012

Query: 116  TSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
             S GG  Y ++FIDDYSR+ WVY +K K+EVL  F ++
Sbjct: 1013 ISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQF 1050


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  157 bits (398), Expect = 1e-41
 Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
 Frame = -3

Query: 470  EHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGA--LAASIDTDEDASRL*HMRLGHTGE 297
            E GVLKV  G+L V++G  +R LYFL GS+VTG   +++S D D D ++L HMRLGH  E
Sbjct: 872  EGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSE 931

Query: 296  XXXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKN 117
                         G  T KL+FCEHCV  K+T+VKF T IH+TKG +DY H+D+WG S  
Sbjct: 932  RGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPT 991

Query: 116  TSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
             S GG  Y ++FIDDYSR+ WVY +K K+EVL  F ++
Sbjct: 992  ISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQF 1029


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  157 bits (397), Expect = 2e-41
 Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470 EHGVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASID-TDEDASRL*HMRLGHTGEX 294
           E GVLKV+KG++V++K  R  +LY LQGS VTG+ A S   +D+DA++L HMRLGH  E 
Sbjct: 76  EGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEK 135

Query: 293 XXXXXXXXXXXXGAKTCKLDFCEHCVLEKKTKVKFGTAIHRTKGILDYVHTDVWGSSKNT 114
                            KL+FCEHCV  K+ +V F TA HRTKG LDY+H+D+WG SK  
Sbjct: 136 GMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVP 195

Query: 113 SLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEW 3
           S GG  Y ++ IDD+SR+ WVY ++HK+E    F +W
Sbjct: 196 SYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKW 232