BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00004829
         (743 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244786.1| RNA polymerase sigma factor sigA [Asparagus ...   305   3e-98
gb|ONK58865.1| uncharacterized protein A4U43_C08F530 [Asparagus ...   305   5e-98
ref|XP_008808794.1| PREDICTED: RNA polymerase sigma factor sigA ...   288   1e-91
ref|XP_010910228.1| PREDICTED: RNA polymerase sigma factor sigA ...   267   1e-83
ref|XP_009397520.1| PREDICTED: RNA polymerase sigma factor sigA ...   249   2e-76
gb|OAY70832.1| RNA polymerase sigma factor sigA [Ananas comosus]      243   2e-74
ref|XP_020114873.1| RNA polymerase sigma factor sigA isoform X3 ...   242   3e-74
ref|XP_020114872.1| RNA polymerase sigma factor sigA isoform X2 ...   242   5e-74
ref|XP_020114871.1| RNA polymerase sigma factor sigA isoform X1 ...   242   8e-74
ref|XP_009382828.1| PREDICTED: RNA polymerase sigma factor sigA-...   238   2e-72
gb|OVA18378.1| RNA polymerase sigma-70 [Macleaya cordata]             231   1e-69
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   231   1e-69
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   229   7e-69
gb|PKA46184.1| RNA polymerase sigma factor sigA [Apostasia shenz...   225   3e-67
ref|XP_020685448.1| RNA polymerase sigma factor sigA isoform X3 ...   220   2e-65
ref|XP_020685447.1| RNA polymerase sigma factor sigA isoform X2 ...   220   3e-65
ref|XP_020685443.1| RNA polymerase sigma factor sigA isoform X1 ...   220   3e-65
gb|KJB44351.1| hypothetical protein B456_007G247500 [Gossypium r...   215   1e-64
gb|PPD83988.1| hypothetical protein GOBAR_DD19076 [Gossypium bar...   218   2e-64
ref|XP_016697692.1| PREDICTED: RNA polymerase sigma factor sigA-...   218   2e-64

>ref|XP_020244786.1| RNA polymerase sigma factor sigA [Asparagus officinalis]
 ref|XP_020244787.1| RNA polymerase sigma factor sigA [Asparagus officinalis]
          Length = 501

 Score =  305 bits (780), Expect = 3e-98
 Identities = 163/247 (65%), Positives = 195/247 (78%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGL+AGKRILSS+FYSS+     F  +DHGS QFSA ++KS +I++RRS+H + +V
Sbjct: 4   TAAVIGLNAGKRILSSTFYSSE-----FTFIDHGSPQFSAPTSKS-IIIARRSSHPNTSV 57

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
           P++RH+V +KAV+EH DTI+P  T   W +                EVFLLLQKSMLEKQ
Sbjct: 58  PSERHSVSIKAVKEHTDTISPIATDD-WSDLIEEEEDGDSDIKSSLEVFLLLQKSMLEKQ 116

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           WKLSFNQM T  APGET +K EVIRSGISARKRRT+   K   +S+Y+GI+ +G+QLRA 
Sbjct: 117 WKLSFNQMSTATAPGETCRKTEVIRSGISARKRRTSTRTKSINQSSYVGIMEEGKQLRAA 176

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+Q +LTGYVRGTVSEDLL+HSEVVHLSKKIKAGLSLE+HRAKMK  LGFEP+DKQ
Sbjct: 177 VSPELLQAKLTGYVRGTVSEDLLTHSEVVHLSKKIKAGLSLEDHRAKMKGKLGFEPSDKQ 236

Query: 23  LASSLRM 3
           LASSLRM
Sbjct: 237 LASSLRM 243


>gb|ONK58865.1| uncharacterized protein A4U43_C08F530 [Asparagus officinalis]
          Length = 521

 Score =  305 bits (780), Expect = 5e-98
 Identities = 163/247 (65%), Positives = 195/247 (78%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGL+AGKRILSS+FYSS+     F  +DHGS QFSA ++KS +I++RRS+H + +V
Sbjct: 4   TAAVIGLNAGKRILSSTFYSSE-----FTFIDHGSPQFSAPTSKS-IIIARRSSHPNTSV 57

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
           P++RH+V +KAV+EH DTI+P  T   W +                EVFLLLQKSMLEKQ
Sbjct: 58  PSERHSVSIKAVKEHTDTISPIATDD-WSDLIEEEEDGDSDIKSSLEVFLLLQKSMLEKQ 116

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           WKLSFNQM T  APGET +K EVIRSGISARKRRT+   K   +S+Y+GI+ +G+QLRA 
Sbjct: 117 WKLSFNQMSTATAPGETCRKTEVIRSGISARKRRTSTRTKSINQSSYVGIMEEGKQLRAA 176

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+Q +LTGYVRGTVSEDLL+HSEVVHLSKKIKAGLSLE+HRAKMK  LGFEP+DKQ
Sbjct: 177 VSPELLQAKLTGYVRGTVSEDLLTHSEVVHLSKKIKAGLSLEDHRAKMKGKLGFEPSDKQ 236

Query: 23  LASSLRM 3
           LASSLRM
Sbjct: 237 LASSLRM 243


>ref|XP_008808794.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808795.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808796.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808797.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
          Length = 508

 Score =  288 bits (737), Expect = 1e-91
 Identities = 153/250 (61%), Positives = 194/250 (77%), Gaps = 3/250 (1%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLS GKR+LS+SFY +DLA++LF V DHGS QFS +STK++ I ++RS++F  N+
Sbjct: 3   TAAVIGLSTGKRLLSTSFYPADLAEKLFAVPDHGSMQFSTSSTKNT-IAAKRSSNFGTNI 61

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
           P++RH+  +KA++EHVDT A  +T+ +WF R               EV +LLQKSMLEKQ
Sbjct: 62  PSNRHSQAIKALKEHVDTAA-LSTADAWFRRPDPLEDGESDLEYSLEVLILLQKSMLEKQ 120

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVG---KGRQL 213
           WKL F Q++TV  P E+ KK EVIRSGISARKRRT   ++CF RSAYM       +G++L
Sbjct: 121 WKLPFEQIKTVDDPRESCKKTEVIRSGISARKRRTVTRRRCFNRSAYMEPFNGGEEGKEL 180

Query: 212 RATVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPN 33
           R+TVSPEL+QTR+ GYVRGTVSE+LL+H+EVVHLS+KI+AGLSLEE R K+KE LGFEP+
Sbjct: 181 RSTVSPELLQTRVRGYVRGTVSENLLTHAEVVHLSRKIRAGLSLEEKRMKLKEKLGFEPS 240

Query: 32  DKQLASSLRM 3
           DKQLAS LRM
Sbjct: 241 DKQLASFLRM 250


>ref|XP_010910228.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910230.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910231.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910232.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910235.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910236.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910226.2| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703121.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703122.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703123.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
          Length = 508

 Score =  267 bits (683), Expect = 1e-83
 Identities = 146/249 (58%), Positives = 188/249 (75%), Gaps = 3/249 (1%)
 Frame = -1

Query: 740 AAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANVP 561
           AAV GLS GKR+LS+SFY SDLA++LF V DH S QFS ASTK++ I +++S++FS N+ 
Sbjct: 4   AAVFGLSRGKRLLSTSFYPSDLAEKLFAVPDHASMQFSTASTKNT-IAAKKSSNFSTNIR 62

Query: 560 ADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQW 381
           ++RH+  +KA++EHVDT A  +T+ +WF+R               EV LLLQKSMLEKQ 
Sbjct: 63  SNRHSQAIKALKEHVDTSA-LSTADTWFQRPDLLEDGESDLEYSLEVLLLLQKSMLEKQR 121

Query: 380 KLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYM---GIVGKGRQLR 210
           KL F Q++TV  P E+ KK EVIRSGISARKRRT     CF ++AYM     V +G++LR
Sbjct: 122 KLPFEQIKTVDDPRESCKKTEVIRSGISARKRRTITRMTCFNQNAYMEPLNRVKEGKELR 181

Query: 209 ATVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPND 30
           +TVSPEL+Q  + GYVRGT+S++LLSH+EVVHLS+KI+AGLSLEE+R K+KE LGFEP+D
Sbjct: 182 STVSPELLQMHVRGYVRGTISQNLLSHAEVVHLSRKIRAGLSLEENRMKLKEKLGFEPSD 241

Query: 29  KQLASSLRM 3
           KQLAS L M
Sbjct: 242 KQLASFLGM 250


>ref|XP_009397520.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397527.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397536.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397544.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
          Length = 498

 Score =  249 bits (635), Expect = 2e-76
 Identities = 134/247 (54%), Positives = 178/247 (72%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGL  GKR+LSSSF  +DL ++LF V DHGS  FS  STK + IV+++S+HF +NV
Sbjct: 4   TAAVIGLHTGKRLLSSSFCQTDLTEKLFSVPDHGSLPFSGGSTKCT-IVAKKSSHFGSNV 62

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
           P  RH   +KA+RE V+T AP+T S +W ER                V +LLQKSMLEKQ
Sbjct: 63  PPTRHIPTIKALRERVNTSAPST-SDTWSERPDLESSLE--------VLILLQKSMLEKQ 113

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+L F QM TVVAP  + + PE+ RSGISAR+RRT +++KCF   A +    + +QL  +
Sbjct: 114 WELPFTQMTTVVAPENSCQMPEITRSGISARERRTISSRKCFSHKANLVPSSRVKQLHPS 173

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VS EL+++ ++GYVRGTVSE+LL+H+EV +LSK IKAG+ ++E RAK+++ LGFEP D+Q
Sbjct: 174 VSRELLKSDISGYVRGTVSENLLTHAEVANLSKTIKAGIHIQEQRAKLQDKLGFEPTDRQ 233

Query: 23  LASSLRM 3
           LASSLRM
Sbjct: 234 LASSLRM 240


>gb|OAY70832.1| RNA polymerase sigma factor sigA [Ananas comosus]
          Length = 501

 Score =  243 bits (621), Expect = 2e-74
 Identities = 134/247 (54%), Positives = 178/247 (72%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS++I +++S +F  N 
Sbjct: 4   TAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAII-AQKSPNFGPNA 62

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
            ++R    +KA++EH  + A T+T+ +W                  EV +LLQKSMLEKQ
Sbjct: 63  SSNRQMRAIKALKEHAHSAA-TSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLEKQ 121

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+L F+QM+T   P E N K EV RSG+SAR+RRT+  +    R + M +  +G+Q+R+T
Sbjct: 122 WELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTDTRR----RFSIMPL-NRGKQIRST 176

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+Q R  GYV+G VSEDLL+H+EVV+LSKKIK GL LEEHRAK+KE LG EP+DKQ
Sbjct: 177 VSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLEEHRAKLKEKLGTEPSDKQ 236

Query: 23  LASSLRM 3
           LA SLRM
Sbjct: 237 LACSLRM 243


>ref|XP_020114873.1| RNA polymerase sigma factor sigA isoform X3 [Ananas comosus]
          Length = 466

 Score =  242 bits (617), Expect = 3e-74
 Identities = 133/247 (53%), Positives = 178/247 (72%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS++I +++S +F  N 
Sbjct: 4   TAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAII-AQKSPNFGPNA 62

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
            ++R    +KA++EH  + A T+T+ +W                  EV +LLQKSMLEKQ
Sbjct: 63  SSNRQMRAIKALKEHAHSAA-TSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLEKQ 121

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+L F+QM+T   P E N K EV RSG+SAR+RRT+  +    R + M +  +G+Q+R+T
Sbjct: 122 WELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTDTRR----RFSIMPL-NRGKQIRST 176

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+Q R  GYV+G VSEDLL+H+EVV+LSKKIK GL L+EHRAK+KE LG EP+DKQ
Sbjct: 177 VSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLKEHRAKLKEKLGTEPSDKQ 236

Query: 23  LASSLRM 3
           LA SLRM
Sbjct: 237 LACSLRM 243


>ref|XP_020114872.1| RNA polymerase sigma factor sigA isoform X2 [Ananas comosus]
          Length = 479

 Score =  242 bits (617), Expect = 5e-74
 Identities = 133/247 (53%), Positives = 178/247 (72%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS++I +++S +F  N 
Sbjct: 4   TAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAII-AQKSPNFGPNA 62

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
            ++R    +KA++EH  + A T+T+ +W                  EV +LLQKSMLEKQ
Sbjct: 63  SSNRQMRAIKALKEHAHSAA-TSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLEKQ 121

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+L F+QM+T   P E N K EV RSG+SAR+RRT+  +    R + M +  +G+Q+R+T
Sbjct: 122 WELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTDTRR----RFSIMPL-NRGKQIRST 176

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+Q R  GYV+G VSEDLL+H+EVV+LSKKIK GL L+EHRAK+KE LG EP+DKQ
Sbjct: 177 VSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLKEHRAKLKEKLGTEPSDKQ 236

Query: 23  LASSLRM 3
           LA SLRM
Sbjct: 237 LACSLRM 243


>ref|XP_020114871.1| RNA polymerase sigma factor sigA isoform X1 [Ananas comosus]
          Length = 501

 Score =  242 bits (617), Expect = 8e-74
 Identities = 133/247 (53%), Positives = 178/247 (72%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS++I +++S +F  N 
Sbjct: 4   TAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAII-AQKSPNFGPNA 62

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
            ++R    +KA++EH  + A T+T+ +W                  EV +LLQKSMLEKQ
Sbjct: 63  SSNRQMRAIKALKEHAHSAA-TSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLEKQ 121

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+L F+QM+T   P E N K EV RSG+SAR+RRT+  +    R + M +  +G+Q+R+T
Sbjct: 122 WELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTDTRR----RFSIMPL-NRGKQIRST 176

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+Q R  GYV+G VSEDLL+H+EVV+LSKKIK GL L+EHRAK+KE LG EP+DKQ
Sbjct: 177 VSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLKEHRAKLKEKLGTEPSDKQ 236

Query: 23  LASSLRM 3
           LA SLRM
Sbjct: 237 LACSLRM 243


>ref|XP_009382828.1| PREDICTED: RNA polymerase sigma factor sigA-like [Musa acuminata
           subsp. malaccensis]
          Length = 491

 Score =  238 bits (607), Expect = 2e-72
 Identities = 127/247 (51%), Positives = 170/247 (68%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           T+AV+GLS GKR+L+SSF  +DLA++LFP++D  +  F  ASTKS V+V+++ + F  N 
Sbjct: 4   TSAVVGLSTGKRLLTSSFCPTDLAEKLFPILDQTTLPFPTASTKS-VVVAQKPSPFRPNA 62

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
           P  RH   +KA++EHV T+AP+ T                      E  +LLQKSMLEKQ
Sbjct: 63  PPTRHVPIIKALKEHVHTLAPSPTDLE----------------SSLEALILLQKSMLEKQ 106

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+L F QM TV APG   + PE+ RSGISAR+RR  + +KC      M    + RQLR+ 
Sbjct: 107 WELPFTQMTTVAAPGNGCRVPEIARSGISARERRMISRRKCIGHRDAMAPASRVRQLRSC 166

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           VSPEL+ +  +GYVRGTVSE LL+H+EVV+LSKKI+AG+ +EEHR+++KE +G+EP DKQ
Sbjct: 167 VSPELLNSDASGYVRGTVSESLLTHAEVVNLSKKIRAGMRVEEHRSRLKEKMGYEPTDKQ 226

Query: 23  LASSLRM 3
           LASSLRM
Sbjct: 227 LASSLRM 233


>gb|OVA18378.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 506

 Score =  231 bits (590), Expect = 1e-69
 Identities = 128/249 (51%), Positives = 178/249 (71%), Gaps = 2/249 (0%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           T AVIGLSAGKR+LSSSFY SD+ D+LF V DHG  Q+  AS KS +I++++S+ F  N 
Sbjct: 4   TTAVIGLSAGKRLLSSSFYYSDVTDKLFSVHDHGLTQYQVASGKS-LIIAKKSSDFGPNF 62

Query: 563 PADRHTVPVKAVREHVDTIA-PTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
           P++RHT  + A+ EH+++ + P+T    W  R               E  LLLQKSMLEK
Sbjct: 63  PSNRHTQSINALIEHLESSSVPSTADGIW--RSDFLEEEDNDSRSSLEAILLLQKSMLEK 120

Query: 386 QWKLSFNQMRTVVAPGETN-KKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLR 210
           QW LSF + +T++ PGE + K  +V RSGISAR+RRT+  KK     + + ++ + +QL 
Sbjct: 121 QWNLSFERKQTMIVPGEESCKNIQVARSGISARQRRTSTRKKSLNHISPLMLLRR-KQLG 179

Query: 209 ATVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPND 30
           + VSPEL+Q RL GYV+G VSE+LL+H+EVV+LSKKIKAGLSLE H++++KE LG+EP++
Sbjct: 180 SIVSPELLQNRLKGYVKGVVSEELLTHAEVVNLSKKIKAGLSLEGHKSRLKERLGYEPSN 239

Query: 29  KQLASSLRM 3
           +QLA+SLR+
Sbjct: 240 EQLATSLRI 248


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  231 bits (589), Expect = 1e-69
 Identities = 124/248 (50%), Positives = 175/248 (70%), Gaps = 1/248 (0%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLSAGKR+L+S+FY SD+ DRL  V DHG AQ+ A S K+ VI++R+S++F  + 
Sbjct: 3   TAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQATSAKN-VIIARKSSNFGDSF 61

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
           P+++H   ++A++EHV+T++  +T+  W +                +  LLLQK +LEKQ
Sbjct: 62  PSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLLEKQ 121

Query: 383 WKLSFNQMRTVVAPGE-TNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRA 207
           W LSF Q  T  APGE T+KK +V RSG+SAR+RRT+  + C      +    K +QL +
Sbjct: 122 WNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSIMQPTKRKQLGS 181

Query: 206 TVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDK 27
            VSPEL+++   GYV+G +SE+LL+H+EVV LSKKIKAGLSLEEH+ ++KE LG +P+D+
Sbjct: 182 MVSPELLKSHY-GYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRLKERLGCDPSDE 240

Query: 26  QLASSLRM 3
           QLASSLR+
Sbjct: 241 QLASSLRI 248


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
 ref|XP_010275190.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
 ref|XP_010275191.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  229 bits (585), Expect = 7e-69
 Identities = 125/248 (50%), Positives = 171/248 (68%), Gaps = 1/248 (0%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGL+AGKR+LSS+FY SD+ DRL  V DHG AQ+  A +KS V+++++S++F  + 
Sbjct: 13  TAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPSKS-VVIAKKSSNFDHDF 71

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
            ++RH   +KA++EH++T + T+T   W +                E  LLLQKS+LEKQ
Sbjct: 72  ASNRHNQSIKALKEHLNTFS-TSTEDMWLQTSDHLEEGNSDLDYSLEALLLLQKSLLEKQ 130

Query: 383 WKLSFNQ-MRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRA 207
           W LSF + MR      ET KK +V RSG+SAR+RRTN  KK     + M    + R L +
Sbjct: 131 WNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTTRRRHLGS 190

Query: 206 TVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDK 27
            VS EL+Q+RL GYV+G +SE+LL+HSEVV LSKKIK G+SLEEH+ ++KE LG EP+D+
Sbjct: 191 MVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHKMRLKERLGCEPSDE 250

Query: 26  QLASSLRM 3
           QLA+SLR+
Sbjct: 251 QLATSLRI 258


>gb|PKA46184.1| RNA polymerase sigma factor sigA [Apostasia shenzhenica]
          Length = 503

 Score =  225 bits (573), Expect = 3e-67
 Identities = 124/247 (50%), Positives = 168/247 (68%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           T  VIGL AGKR+LS+SFY +D AD+  P  DHG  Q S+A+ K+ V+ +++ +HF  + 
Sbjct: 4   TTTVIGLRAGKRLLSTSFYPTDFADKCLP--DHGPVQTSSAANKN-VVYAQKPSHFGMDS 60

Query: 563 PADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEKQ 384
             +RH   VKA+  HVDT AP+TT++ WFE                 V +LLQKSMLEKQ
Sbjct: 61  SKNRHPQLVKALMAHVDTSAPSTTNN-WFENSNTSKNDNDIESSLE-VLILLQKSMLEKQ 118

Query: 383 WKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRAT 204
           W+LSF+  RT+ +P + ++K EV RSGISAR+RR +  +K   ++AY     + +Q  + 
Sbjct: 119 WELSFDHTRTITSPHKGSRKSEVTRSGISARQRRVDMRRKLSDQNAYEVSTNERKQHYSA 178

Query: 203 VSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDKQ 24
           V+PEL+QT L  YVRGT ++ LLSH+EVV LSK +K GLSLEE + K+KE LGFEP+DKQ
Sbjct: 179 VNPELLQTSLGSYVRGTPADALLSHAEVVRLSKNVKVGLSLEEQKTKLKERLGFEPSDKQ 238

Query: 23  LASSLRM 3
           LASSL+M
Sbjct: 239 LASSLKM 245


>ref|XP_020685448.1| RNA polymerase sigma factor sigA isoform X3 [Dendrobium catenatum]
          Length = 497

 Score =  220 bits (560), Expect = 2e-65
 Identities = 127/248 (51%), Positives = 166/248 (66%), Gaps = 2/248 (0%)
 Frame = -1

Query: 740 AAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANVP 561
           AAV+GL+AGKR+L +SFYSSD AD+ FP  DHG+ Q + AS+KS VI +++ ++F  +  
Sbjct: 5   AAVVGLAAGKRLLRNSFYSSDFADKFFP--DHGATQPTTASSKS-VIFAQKPSNFGMDSS 61

Query: 560 ADRHTVPVK--AVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
             RHT P+K  A+  H+DT AP+ T +S FER               EV +LLQKSMLEK
Sbjct: 62  TYRHTEPIKIKALMTHIDTSAPSATDNS-FERLNTVEDHGSDIESSLEVLILLQKSMLEK 120

Query: 386 QWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRA 207
           QW+LSFN  RTV    + +  P + RSGISA+KRR +  +K   ++     + KG+Q  +
Sbjct: 121 QWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRADRRRKFTDQNVSEVHLSKGKQHSS 180

Query: 206 TVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDK 27
            +S E +QT L  YVRGT SE LL HSEVVHLS+KIK GL LEE + K+KE LGFEP+DK
Sbjct: 181 VLSAEFLQTSLGSYVRGTPSEALLRHSEVVHLSRKIKIGLLLEEQKMKLKERLGFEPSDK 240

Query: 26  QLASSLRM 3
           QLA SL+M
Sbjct: 241 QLAFSLKM 248


>ref|XP_020685447.1| RNA polymerase sigma factor sigA isoform X2 [Dendrobium catenatum]
          Length = 501

 Score =  220 bits (560), Expect = 3e-65
 Identities = 127/248 (51%), Positives = 166/248 (66%), Gaps = 2/248 (0%)
 Frame = -1

Query: 740 AAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANVP 561
           AAV+GL+AGKR+L +SFYSSD AD+ FP  DHG+ Q + AS+KS VI +++ ++F  +  
Sbjct: 5   AAVVGLAAGKRLLRNSFYSSDFADKFFP--DHGATQPTTASSKS-VIFAQKPSNFGMDSS 61

Query: 560 ADRHTVPVK--AVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
             RHT P+K  A+  H+DT AP+ T +S FER               EV +LLQKSMLEK
Sbjct: 62  TYRHTEPIKIKALMTHIDTSAPSATDNS-FERLNTVEDHGSDIESSLEVLILLQKSMLEK 120

Query: 386 QWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRA 207
           QW+LSFN  RTV    + +  P + RSGISA+KRR +  +K   ++     + KG+Q  +
Sbjct: 121 QWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRADRRRKFTDQNVSEVHLSKGKQHSS 180

Query: 206 TVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDK 27
            +S E +QT L  YVRGT SE LL HSEVVHLS+KIK GL LEE + K+KE LGFEP+DK
Sbjct: 181 VLSAEFLQTSLGSYVRGTPSEALLRHSEVVHLSRKIKIGLLLEEQKMKLKERLGFEPSDK 240

Query: 26  QLASSLRM 3
           QLA SL+M
Sbjct: 241 QLAFSLKM 248


>ref|XP_020685443.1| RNA polymerase sigma factor sigA isoform X1 [Dendrobium catenatum]
 ref|XP_020685444.1| RNA polymerase sigma factor sigA isoform X1 [Dendrobium catenatum]
 ref|XP_020685445.1| RNA polymerase sigma factor sigA isoform X1 [Dendrobium catenatum]
 gb|PKU75540.1| RNA polymerase sigma factor sigA [Dendrobium catenatum]
          Length = 506

 Score =  220 bits (560), Expect = 3e-65
 Identities = 127/248 (51%), Positives = 166/248 (66%), Gaps = 2/248 (0%)
 Frame = -1

Query: 740 AAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANVP 561
           AAV+GL+AGKR+L +SFYSSD AD+ FP  DHG+ Q + AS+KS VI +++ ++F  +  
Sbjct: 5   AAVVGLAAGKRLLRNSFYSSDFADKFFP--DHGATQPTTASSKS-VIFAQKPSNFGMDSS 61

Query: 560 ADRHTVPVK--AVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
             RHT P+K  A+  H+DT AP+ T +S FER               EV +LLQKSMLEK
Sbjct: 62  TYRHTEPIKIKALMTHIDTSAPSATDNS-FERLNTVEDHGSDIESSLEVLILLQKSMLEK 120

Query: 386 QWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLRA 207
           QW+LSFN  RTV    + +  P + RSGISA+KRR +  +K   ++     + KG+Q  +
Sbjct: 121 QWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRADRRRKFTDQNVSEVHLSKGKQHSS 180

Query: 206 TVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPNDK 27
            +S E +QT L  YVRGT SE LL HSEVVHLS+KIK GL LEE + K+KE LGFEP+DK
Sbjct: 181 VLSAEFLQTSLGSYVRGTPSEALLRHSEVVHLSRKIKIGLLLEEQKMKLKERLGFEPSDK 240

Query: 26  QLASSLRM 3
           QLA SL+M
Sbjct: 241 QLAFSLKM 248


>gb|KJB44351.1| hypothetical protein B456_007G247500 [Gossypium raimondii]
          Length = 389

 Score =  215 bits (548), Expect = 1e-64
 Identities = 123/249 (49%), Positives = 167/249 (67%), Gaps = 2/249 (0%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLS GKR+LSSSF  S+  D+L    D+GS+ +   STK+ ++V++RS++ S N+
Sbjct: 4   TAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKT-LMVAKRSSNCSQNL 62

Query: 563 PA-DRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
           P+ +RHT  +KA +EHVDT +  +T   W                  E  LLLQKSMLEK
Sbjct: 63  PSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSMLEK 122

Query: 386 QWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLR 210
           QW LSF +     +P  +T+ K  V  SG+SAR+RR +  +K   ++  M I    +QLR
Sbjct: 123 QWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSM-IQPNAKQLR 181

Query: 209 ATVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPND 30
           + + PEL+Q RL GYV+G VSEDLLSH+EVV LS+KIKAGLSLEEHR ++KE LG EP+D
Sbjct: 182 SLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCEPSD 241

Query: 29  KQLASSLRM 3
           +QLA+SL++
Sbjct: 242 EQLATSLKV 250


>gb|PPD83988.1| hypothetical protein GOBAR_DD19076 [Gossypium barbadense]
          Length = 507

 Score =  218 bits (555), Expect = 2e-64
 Identities = 125/249 (50%), Positives = 166/249 (66%), Gaps = 2/249 (0%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLS GKR+LSSSF  S+  D+L    D+GS+ +   STK+ ++V++RS++ S N+
Sbjct: 3   TAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKT-LMVAKRSSNCSQNL 61

Query: 563 PA-DRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
           P+ +RHT  +KA +EHVDT +  +T   W                  E  LLLQKSMLEK
Sbjct: 62  PSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSMLEK 121

Query: 386 QWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLR 210
           QW LSF +     +P  +T+ K  V  SG+SAR+RR N  +K   ++  M I    +QLR
Sbjct: 122 QWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFNTKRKILSQNKSM-IQPNAKQLR 180

Query: 209 ATVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPND 30
           + + PEL+Q RL GYV+G VSEDLLSH EVV LSKKIKAGLSLEEHR ++KE LG EP+D
Sbjct: 181 SLIGPELLQNRLKGYVKGVVSEDLLSHGEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSD 240

Query: 29  KQLASSLRM 3
           +QLA+SL++
Sbjct: 241 EQLATSLKV 249


>ref|XP_016697692.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
           [Gossypium hirsutum]
          Length = 508

 Score =  218 bits (555), Expect = 2e-64
 Identities = 125/249 (50%), Positives = 166/249 (66%), Gaps = 2/249 (0%)
 Frame = -1

Query: 743 TAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSANV 564
           TAAVIGLS GKR+LSSSF  S+  D+L    D+GS+ +   STK+ ++V++RS++ S N+
Sbjct: 4   TAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKT-LMVAKRSSNCSQNL 62

Query: 563 PA-DRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXEVFLLLQKSMLEK 387
           P+ +RHT  +KA +EHVDT +  +T   W                  E  LLLQKSMLEK
Sbjct: 63  PSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSMLEK 122

Query: 386 QWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTNATKKCFKRSAYMGIVGKGRQLR 210
           QW LSF +     +P  +T+ K  V  SG+SAR+RR N  +K   ++  M I    +QLR
Sbjct: 123 QWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFNTKRKILSQNKSM-IQPNAKQLR 181

Query: 209 ATVSPELMQTRLTGYVRGTVSEDLLSHSEVVHLSKKIKAGLSLEEHRAKMKENLGFEPND 30
           + + PEL+Q RL GYV+G VSEDLLSH EVV LSKKIKAGLSLEEHR ++KE LG EP+D
Sbjct: 182 SLIGPELLQNRLKGYVKGVVSEDLLSHGEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSD 241

Query: 29  KQLASSLRM 3
           +QLA+SL++
Sbjct: 242 EQLATSLKV 250