BLASTX nr result

ID: Ophiopogon22_contig00004724 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00004724
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [...    60   3e-17
ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [...    55   5e-13
gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagu...    55   5e-13

>ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
 gb|ONK56901.1| uncharacterized protein A4U43_C10F14450 [Asparagus officinalis]
          Length = 1217

 Score = 60.1 bits (144), Expect(2) = 3e-17
 Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 22/112 (19%)
 Frame = +3

Query: 30  GPDAANNCNLTPVGPTDPKLADNSLVLP-----SSTSAPQCSGGTMTTPVA--------- 167
           G DAA + N+     +DPK+A  S VLP     S +  PQ SG T+  P A         
Sbjct: 358 GSDAAGS-NIIASETSDPKMACISQVLPCSNLVSDSLIPQRSGETIAAPAAGLGWTSKTA 416

Query: 168 --------CGEANAQSFSLDNSLISGMASGIDGITLADTARVSNLDQGRTED 299
                   C E NA+  S+ N ++SG+   +D I + D  R+SNLDQGR ED
Sbjct: 417 DTLNDGITCSEENARLISVGNKMMSGVNLDMDRIAVQDITRLSNLDQGRIED 468



 Score = 55.8 bits (133), Expect(2) = 3e-17
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = +2

Query: 320 SCTTAGNQTNLISPADMVQERAEGFSFREQPCNLETPMVDQEFNF 454
           SCT+  NQTNLISP  +VQ+  +G SFREQP  LET + DQE +F
Sbjct: 488 SCTSESNQTNLISPEVIVQKGDQGMSFREQPSILETAVEDQEMHF 532


>ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
          Length = 1236

 Score = 54.7 bits (130), Expect(2) = 5e-13
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +2

Query: 320 SCTTAGNQTNLISPADMVQERAEGFSFREQPCNLETPMVDQEFNF 454
           SCT+  N  +L+SP  +VQERA+ FSFR +PCNLET   D+E  F
Sbjct: 506 SCTSESNLASLMSPEGVVQERAQEFSFRAEPCNLETQTADKETLF 550



 Score = 47.0 bits (110), Expect(2) = 5e-13
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
 Frame = +3

Query: 15  VSVEAGPDAANNCNLTPVGP------TDPKLADNSLVLPSST-----SAPQC-------S 140
           V  EA P A+++   T  G       TDPKLA+ S  LPSST       PQC       S
Sbjct: 377 VLTEATPAASHSLGGTSSGSDVLVRSTDPKLAEISPALPSSTLGHTEPVPQCSDEVIAAS 436

Query: 141 GGTMTTPVACGEANAQSFSLDNSLISGMASGIDGITLADTARVSNLDQGRTED 299
           G  + + +  G+      S D   ++G A+ +D  TL D   +SNLDQ R ED
Sbjct: 437 GVDLGSNLNTGDTLHGGISED---LAGSAAVMDKTTLVDPKSLSNLDQERVED 486


>gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagus officinalis]
          Length = 1222

 Score = 54.7 bits (130), Expect(2) = 5e-13
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +2

Query: 320 SCTTAGNQTNLISPADMVQERAEGFSFREQPCNLETPMVDQEFNF 454
           SCT+  N  +L+SP  +VQERA+ FSFR +PCNLET   D+E  F
Sbjct: 492 SCTSESNLASLMSPEGVVQERAQEFSFRAEPCNLETQTADKETLF 536



 Score = 47.0 bits (110), Expect(2) = 5e-13
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
 Frame = +3

Query: 15  VSVEAGPDAANNCNLTPVGP------TDPKLADNSLVLPSST-----SAPQC-------S 140
           V  EA P A+++   T  G       TDPKLA+ S  LPSST       PQC       S
Sbjct: 363 VLTEATPAASHSLGGTSSGSDVLVRSTDPKLAEISPALPSSTLGHTEPVPQCSDEVIAAS 422

Query: 141 GGTMTTPVACGEANAQSFSLDNSLISGMASGIDGITLADTARVSNLDQGRTED 299
           G  + + +  G+      S D   ++G A+ +D  TL D   +SNLDQ R ED
Sbjct: 423 GVDLGSNLNTGDTLHGGISED---LAGSAAVMDKTTLVDPKSLSNLDQERVED 472


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