BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00004629
         (678 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BBC66038.1| hypothetical protein MMRN_29340 [Mycobacterium m...    58   3e-06

>dbj|BBC66038.1| hypothetical protein MMRN_29340 [Mycobacterium marinum]
          Length = 522

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
 Frame = +3

Query: 42  TLQDHH*SKLHTLAMCRIWHTSSRHNTNITPYGHNNPHTAQNQHLT-SIHHTTPQHMTYY 218
           TL  HH +   T+   ++ H ++ HN NIT Y H+ PHT     L  +  HT P    Y 
Sbjct: 340 TLLGHHHT---TIPDDQLHHLTTNHNNNITLYQHHQPHTYTGPTLLIAAEHTPPPTTPYE 396

Query: 219 VKPTPSRTQTHKRQLHHQPHSLTIPRSQTHLQLRHPNTTPKTASTATLHPSHQAHQSVTK 398
              T +    H  Q H    + T   + TH QL HPN TP T +T+    S    Q + +
Sbjct: 397 STHTKAAYLLHAWQPHLTGPTTTHSTNSTHHQLLHPNHTPPTPTTS--KTSSNDTQVIQR 454

Query: 399 SHRINKL 419
            H  N L
Sbjct: 455 RHLRNGL 461