BLASTX nr result
ID: Ophiopogon22_contig00004348
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00004348
(838 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020247553.1| RNA polymerase II transcription factor B sub... 395 e-134
ref|XP_010940421.1| PREDICTED: RNA polymerase II transcription f... 384 e-130
ref|XP_010940418.1| PREDICTED: RNA polymerase II transcription f... 384 e-130
ref|XP_020113269.1| RNA polymerase II transcription factor B sub... 381 e-129
ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription f... 384 e-129
ref|XP_008778436.1| PREDICTED: RNA polymerase II transcription f... 380 e-129
ref|XP_020113268.1| RNA polymerase II transcription factor B sub... 381 e-129
ref|XP_020113267.1| RNA polymerase II transcription factor B sub... 381 e-128
ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription f... 380 e-128
ref|XP_019074131.1| PREDICTED: RNA polymerase II transcription f... 376 e-126
ref|XP_012091582.1| RNA polymerase II transcription factor B sub... 376 e-126
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera] 376 e-126
ref|XP_003635508.2| PREDICTED: RNA polymerase II transcription f... 376 e-126
ref|XP_021599929.1| RNA polymerase II transcription factor B sub... 373 e-125
gb|KCW74602.1| hypothetical protein EUGRSUZ_E03323 [Eucalyptus g... 371 e-124
ref|XP_010057431.1| PREDICTED: RNA polymerase II transcription f... 371 e-124
ref|XP_010057306.1| PREDICTED: RNA polymerase II transcription f... 371 e-124
ref|XP_006653885.1| PREDICTED: RNA polymerase II transcription f... 370 e-124
gb|PIN26766.1| RNA polymerase II transcription initiation/nucleo... 370 e-124
gb|OAY83764.1| General transcription factor IIH subunit 4 [Anana... 367 e-123
>ref|XP_020247553.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
ref|XP_020247554.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
Length = 451
Score = 395 bits (1015), Expect = e-134
Identities = 196/209 (93%), Positives = 205/209 (98%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH+MG+AYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 227 ISFLLELSFHTMGKAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSDTS+RKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA
Sbjct: 287 SLSDTSARKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+++QIISFLQQNAHPRVAEKTPA+PENVTDQIRLWE DRNRV++ PSHLYEDFPS
Sbjct: 347 FENGITSDQIISFLQQNAHPRVAEKTPAIPENVTDQIRLWEGDRNRVDLIPSHLYEDFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KDVFEAACDFARE GLLWEDSKKMRLIV
Sbjct: 407 KDVFEAACDFARELGGLLWEDSKKMRLIV 435
Score = 109 bits (272), Expect = 2e-23
Identities = 55/58 (94%), Positives = 55/58 (94%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLISSAQ ER TNFSSSMMRVFQRGLLSSRENEA RLTENGFQFLLM
Sbjct: 142 YALEQWECFLLQLISSAQVERVTNFSSSMMRVFQRGLLSSRENEAVRLTENGFQFLLM 199
>ref|XP_010940421.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Elaeis guineensis]
Length = 390
Score = 384 bits (985), Expect = e-130
Identities = 188/209 (89%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
I FLLELSFH++GEAYNL+TLTDVQ++AIKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 166 ICFLLELSFHTLGEAYNLNTLTDVQKHAIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 225
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSD+SSRK+G+VVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 226 SLSDSSSRKEGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 285
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQN HPRVA KTPAVPENVTDQIRLWETDRNRVEM PSHLYEDFPS
Sbjct: 286 FENGITAEQIISFLQQNVHPRVATKTPAVPENVTDQIRLWETDRNRVEMIPSHLYEDFPS 345
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FEA CDFARE GLLWEDSKKMRL+V
Sbjct: 346 KDIFEAVCDFAREIGGLLWEDSKKMRLVV 374
Score = 107 bits (267), Expect = 4e-23
Identities = 52/58 (89%), Positives = 57/58 (98%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLI+SAQAER T+FSSS+MRVFQRGLLS+RENEAP+LTENGFQFLLM
Sbjct: 81 YALEQWECFLLQLINSAQAERLTSFSSSLMRVFQRGLLSARENEAPKLTENGFQFLLM 138
>ref|XP_010940418.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Elaeis guineensis]
ref|XP_010940419.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Elaeis guineensis]
Length = 403
Score = 384 bits (985), Expect = e-130
Identities = 188/209 (89%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
I FLLELSFH++GEAYNL+TLTDVQ++AIKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 179 ICFLLELSFHTLGEAYNLNTLTDVQKHAIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 238
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSD+SSRK+G+VVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 239 SLSDSSSRKEGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 298
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQN HPRVA KTPAVPENVTDQIRLWETDRNRVEM PSHLYEDFPS
Sbjct: 299 FENGITAEQIISFLQQNVHPRVATKTPAVPENVTDQIRLWETDRNRVEMIPSHLYEDFPS 358
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FEA CDFARE GLLWEDSKKMRL+V
Sbjct: 359 KDIFEAVCDFAREIGGLLWEDSKKMRLVV 387
Score = 107 bits (267), Expect = 5e-23
Identities = 52/58 (89%), Positives = 57/58 (98%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLI+SAQAER T+FSSS+MRVFQRGLLS+RENEAP+LTENGFQFLLM
Sbjct: 94 YALEQWECFLLQLINSAQAERLTSFSSSLMRVFQRGLLSARENEAPKLTENGFQFLLM 151
>ref|XP_020113269.1| RNA polymerase II transcription factor B subunit 2 isoform X3
[Ananas comosus]
Length = 379
Score = 381 bits (979), Expect = e-129
Identities = 188/209 (89%), Positives = 202/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH++GEAYNL+TLTDVQRNAIKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 154 ISFLLELSFHTLGEAYNLNTLTDVQRNAIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 213
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRK+G+VVVETNFRMYAYSTS+LH EILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 214 SLTDSSSRKEGFVVVETNFRMYAYSTSRLHSEILRLFSRIEYQLPNLIVGAITKESLYNA 273
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQI+SFLQQNAHPRVAEK P VPENVTDQIRLWETDRNRVEM PSHLYEDFPS
Sbjct: 274 FENGITAEQIVSFLQQNAHPRVAEKIPTVPENVTDQIRLWETDRNRVEMIPSHLYEDFPS 333
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FEA CDFARE++ LLWEDSKKMRLIV
Sbjct: 334 KDLFEACCDFAREYNCLLWEDSKKMRLIV 362
Score = 102 bits (254), Expect = 2e-21
Identities = 50/58 (86%), Positives = 55/58 (94%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YA +QWECFLLQLI+S+QAER T+FSSS MRVFQRGLLSSRENEAP+LTENGFQFLLM
Sbjct: 69 YAHQQWECFLLQLINSSQAERLTSFSSSTMRVFQRGLLSSRENEAPKLTENGFQFLLM 126
>ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
ref|XP_010940416.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
Length = 451
Score = 384 bits (985), Expect = e-129
Identities = 188/209 (89%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
I FLLELSFH++GEAYNL+TLTDVQ++AIKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 227 ICFLLELSFHTLGEAYNLNTLTDVQKHAIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSD+SSRK+G+VVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLSDSSSRKEGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQN HPRVA KTPAVPENVTDQIRLWETDRNRVEM PSHLYEDFPS
Sbjct: 347 FENGITAEQIISFLQQNVHPRVATKTPAVPENVTDQIRLWETDRNRVEMIPSHLYEDFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FEA CDFARE GLLWEDSKKMRL+V
Sbjct: 407 KDIFEAVCDFAREIGGLLWEDSKKMRLVV 435
Score = 107 bits (267), Expect = 8e-23
Identities = 52/58 (89%), Positives = 57/58 (98%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLI+SAQAER T+FSSS+MRVFQRGLLS+RENEAP+LTENGFQFLLM
Sbjct: 142 YALEQWECFLLQLINSAQAERLTSFSSSLMRVFQRGLLSARENEAPKLTENGFQFLLM 199
>ref|XP_008778436.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Phoenix dactylifera]
Length = 401
Score = 380 bits (977), Expect = e-129
Identities = 185/209 (88%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH++GEAYNL+TLTDVQ++AIKDLA LGL+KLQQGRKESWFIPTKLATNLSV
Sbjct: 177 ISFLLELSFHTLGEAYNLNTLTDVQKHAIKDLADLGLIKLQQGRKESWFIPTKLATNLSV 236
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSD+SSRK+G+VVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 237 SLSDSSSRKEGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 296
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQN HPRVA KTP +PENVTDQIRLWETDRNRVE+ PSHLYEDFPS
Sbjct: 297 FENGITAEQIISFLQQNVHPRVATKTPVIPENVTDQIRLWETDRNRVEIIPSHLYEDFPS 356
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
K++FEA CDFARE GLLWEDSKKMRLIV
Sbjct: 357 KEIFEAVCDFAREIGGLLWEDSKKMRLIV 385
Score = 106 bits (265), Expect = 9e-23
Identities = 52/58 (89%), Positives = 56/58 (96%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLI+SAQAER T+FSSSMMRVFQRGLLS+REN AP+LTENGFQFLLM
Sbjct: 92 YALEQWECFLLQLINSAQAERSTSFSSSMMRVFQRGLLSARENGAPKLTENGFQFLLM 149
>ref|XP_020113268.1| RNA polymerase II transcription factor B subunit 2 isoform X2
[Ananas comosus]
Length = 429
Score = 381 bits (979), Expect = e-129
Identities = 188/209 (89%), Positives = 202/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH++GEAYNL+TLTDVQRNAIKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 204 ISFLLELSFHTLGEAYNLNTLTDVQRNAIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 263
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRK+G+VVVETNFRMYAYSTS+LH EILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 264 SLTDSSSRKEGFVVVETNFRMYAYSTSRLHSEILRLFSRIEYQLPNLIVGAITKESLYNA 323
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQI+SFLQQNAHPRVAEK P VPENVTDQIRLWETDRNRVEM PSHLYEDFPS
Sbjct: 324 FENGITAEQIVSFLQQNAHPRVAEKIPTVPENVTDQIRLWETDRNRVEMIPSHLYEDFPS 383
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FEA CDFARE++ LLWEDSKKMRLIV
Sbjct: 384 KDLFEACCDFAREYNCLLWEDSKKMRLIV 412
Score = 102 bits (254), Expect = 4e-21
Identities = 50/58 (86%), Positives = 55/58 (94%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YA +QWECFLLQLI+S+QAER T+FSSS MRVFQRGLLSSRENEAP+LTENGFQFLLM
Sbjct: 119 YAHQQWECFLLQLINSSQAERLTSFSSSTMRVFQRGLLSSRENEAPKLTENGFQFLLM 176
>ref|XP_020113267.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Ananas comosus]
Length = 452
Score = 381 bits (979), Expect = e-128
Identities = 188/209 (89%), Positives = 202/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH++GEAYNL+TLTDVQRNAIKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 227 ISFLLELSFHTLGEAYNLNTLTDVQRNAIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRK+G+VVVETNFRMYAYSTS+LH EILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLTDSSSRKEGFVVVETNFRMYAYSTSRLHSEILRLFSRIEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQI+SFLQQNAHPRVAEK P VPENVTDQIRLWETDRNRVEM PSHLYEDFPS
Sbjct: 347 FENGITAEQIVSFLQQNAHPRVAEKIPTVPENVTDQIRLWETDRNRVEMIPSHLYEDFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FEA CDFARE++ LLWEDSKKMRLIV
Sbjct: 407 KDLFEACCDFAREYNCLLWEDSKKMRLIV 435
Score = 102 bits (254), Expect = 5e-21
Identities = 50/58 (86%), Positives = 55/58 (94%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YA +QWECFLLQLI+S+QAER T+FSSS MRVFQRGLLSSRENEAP+LTENGFQFLLM
Sbjct: 142 YAHQQWECFLLQLINSSQAERLTSFSSSTMRVFQRGLLSSRENEAPKLTENGFQFLLM 199
>ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Phoenix dactylifera]
Length = 451
Score = 380 bits (977), Expect = e-128
Identities = 185/209 (88%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH++GEAYNL+TLTDVQ++AIKDLA LGL+KLQQGRKESWFIPTKLATNLSV
Sbjct: 227 ISFLLELSFHTLGEAYNLNTLTDVQKHAIKDLADLGLIKLQQGRKESWFIPTKLATNLSV 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSD+SSRK+G+VVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLSDSSSRKEGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQN HPRVA KTP +PENVTDQIRLWETDRNRVE+ PSHLYEDFPS
Sbjct: 347 FENGITAEQIISFLQQNVHPRVATKTPVIPENVTDQIRLWETDRNRVEIIPSHLYEDFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
K++FEA CDFARE GLLWEDSKKMRLIV
Sbjct: 407 KEIFEAVCDFAREIGGLLWEDSKKMRLIV 435
Score = 106 bits (265), Expect = 1e-22
Identities = 52/58 (89%), Positives = 56/58 (96%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLI+SAQAER T+FSSSMMRVFQRGLLS+REN AP+LTENGFQFLLM
Sbjct: 142 YALEQWECFLLQLINSAQAERSTSFSSSMMRVFQRGLLSARENGAPKLTENGFQFLLM 199
>ref|XP_019074131.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Vitis vinifera]
Length = 442
Score = 376 bits (965), Expect = e-126
Identities = 183/209 (87%), Positives = 199/209 (95%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH GEAYN++TLT+ QRN IKDL LGLVKLQQGRKESWFIPTKLATNLS+
Sbjct: 218 ISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNLSM 277
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSDTSSRKQG+VVVETNFR+YAYS+SKLHCEILRLFSR+EYQLPNLIVG+ITKESLYNA
Sbjct: 278 SLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNA 337
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQNAHPRVAE+TPAVPENVTDQIRLWETD NRVE PSHLY++FPS
Sbjct: 338 FENGITAEQIISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEFPS 397
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+ GLLWEDSKKMRL+V
Sbjct: 398 RDVFEAACDFAREYGGLLWEDSKKMRLVV 426
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YAL QWECFLLQLISS Q ++M+VFQRGLL+ RE EAPRLTE+GFQFLLM
Sbjct: 142 YALGQWECFLLQLISSTQ---------TVMKVFQRGLLTQREKEAPRLTESGFQFLLM 190
>ref|XP_012091582.1| RNA polymerase II transcription factor B subunit 2 [Jatropha
curcas]
gb|KDP20952.1| hypothetical protein JCGZ_21423 [Jatropha curcas]
Length = 450
Score = 376 bits (965), Expect = e-126
Identities = 182/209 (87%), Positives = 200/209 (95%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH+ GEAYN++TLTD+QRN IKDLA LGL+KLQQGRKESWFIPTKLATNLSV
Sbjct: 226 ISFLLELSFHTPGEAYNMNTLTDIQRNTIKDLADLGLIKLQQGRKESWFIPTKLATNLSV 285
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRKQG+VVVETNFRMYAYS SKLHCEILRLFSR+EYQLPNLIVG+ITKESLYNA
Sbjct: 286 SLTDSSSRKQGFVVVETNFRMYAYSQSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNA 345
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQNAHPRVAEK P VPENVTDQIRLWE+D NRVEMTP+H Y++FPS
Sbjct: 346 FENGITAEQIISFLQQNAHPRVAEKIPTVPENVTDQIRLWESDLNRVEMTPAHFYDEFPS 405
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+SGLLWEDSKKMR+ V
Sbjct: 406 RDVFEAACDFAREWSGLLWEDSKKMRMAV 434
Score = 94.4 bits (233), Expect = 3e-18
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YAL QWECFLLQLI+SAQAE+ TNFSSSM+++FQRGLLS R+ +A RLTE GFQFLLM
Sbjct: 141 YALGQWECFLLQLINSAQAEKLTNFSSSMIKIFQRGLLSQRDKDAARLTEGGFQFLLM 198
>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 376 bits (965), Expect = e-126
Identities = 183/209 (87%), Positives = 199/209 (95%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH GEAYN++TLT+ QRN IKDL LGLVKLQQGRKESWFIPTKLATNLS+
Sbjct: 227 ISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNLSM 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSDTSSRKQG+VVVETNFR+YAYS+SKLHCEILRLFSR+EYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQNAHPRVAE+TPAVPENVTDQIRLWETD NRVE PSHLY++FPS
Sbjct: 347 FENGITAEQIISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+ GLLWEDSKKMRL+V
Sbjct: 407 RDVFEAACDFAREYGGLLWEDSKKMRLVV 435
Score = 97.8 bits (242), Expect = 2e-19
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YAL QWECFLLQLISS Q E+ TNFSSS+M+VFQRGLL+ RE EAPRLTE+GFQFLLM
Sbjct: 142 YALGQWECFLLQLISSTQTEKLTNFSSSLMKVFQRGLLTQREKEAPRLTESGFQFLLM 199
>ref|XP_003635508.2| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Vitis vinifera]
Length = 451
Score = 376 bits (965), Expect = e-126
Identities = 183/209 (87%), Positives = 199/209 (95%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH GEAYN++TLT+ QRN IKDL LGLVKLQQGRKESWFIPTKLATNLS+
Sbjct: 227 ISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNLSM 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSDTSSRKQG+VVVETNFR+YAYS+SKLHCEILRLFSR+EYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQNAHPRVAE+TPAVPENVTDQIRLWETD NRVE PSHLY++FPS
Sbjct: 347 FENGITAEQIISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+ GLLWEDSKKMRL+V
Sbjct: 407 RDVFEAACDFAREYGGLLWEDSKKMRLVV 435
Score = 99.0 bits (245), Expect = 8e-20
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YAL QWECFLLQLISS Q E+ TNFSSSMM+VFQRGLL+ RE EAPRLTE+GFQFLLM
Sbjct: 142 YALGQWECFLLQLISSTQTEKLTNFSSSMMKVFQRGLLTQREKEAPRLTESGFQFLLM 199
>ref|XP_021599929.1| RNA polymerase II transcription factor B subunit 2 [Manihot
esculenta]
gb|OAY24793.1| hypothetical protein MANES_17G044000 [Manihot esculenta]
Length = 451
Score = 373 bits (958), Expect = e-125
Identities = 180/209 (86%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH GEAYN++TLT+++R+ IKDLA LGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 227 ISFLLELSFHITGEAYNMNTLTEIERHMIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRKQG+VVVETNFRMYAYSTSKLHCEILRLFSR+EYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQNAHPRVAE+ P VPENVTDQIRLWE+D NRVEMTP+H Y++FPS
Sbjct: 347 FENGITAEQIISFLQQNAHPRVAERIPTVPENVTDQIRLWESDLNRVEMTPAHFYDEFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+SGLLWEDSKKMR++V
Sbjct: 407 RDVFEAACDFAREWSGLLWEDSKKMRMVV 435
Score = 102 bits (255), Expect = 3e-21
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YAL QWECFLLQLI+S QAE+PTNFSSSMM++FQRGLLS R+ EAPRLTE+GFQFLLM
Sbjct: 142 YALGQWECFLLQLINSTQAEKPTNFSSSMMKIFQRGLLSQRDKEAPRLTESGFQFLLM 199
>gb|KCW74602.1| hypothetical protein EUGRSUZ_E03323 [Eucalyptus grandis]
Length = 451
Score = 371 bits (952), Expect = e-124
Identities = 177/209 (84%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH+ GEAYN++TLT+VQRN +KDLA LGLVKLQQGRKESWFIPTKL TNLSV
Sbjct: 226 ISFLLELSFHATGEAYNMNTLTEVQRNTLKDLADLGLVKLQQGRKESWFIPTKLTTNLSV 285
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRK+G+VVVETNFR+YAYSTSKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 286 SLTDSSSRKEGFVVVETNFRIYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 345
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
F+NGI+AEQIISFLQQNAHPRV+E+ P+VPENVTDQIRLWE+D NRVEMTP+H Y++FP+
Sbjct: 346 FDNGITAEQIISFLQQNAHPRVSERVPSVPENVTDQIRLWESDLNRVEMTPAHFYDEFPT 405
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+ GLLWEDSKKMRL+V
Sbjct: 406 RDVFEAACDFAREYGGLLWEDSKKMRLVV 434
Score = 94.4 bits (233), Expect = 3e-18
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
+ALEQWECFLLQLI+S QAE+ TN S SMMR+FQRGLL+ R+ E PRLTE+GFQFLLM
Sbjct: 141 FALEQWECFLLQLINSTQAEKMTNISPSMMRIFQRGLLTQRDKEPPRLTESGFQFLLM 198
>ref|XP_010057431.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Eucalyptus grandis]
gb|KCW74601.1| hypothetical protein EUGRSUZ_E03323 [Eucalyptus grandis]
Length = 452
Score = 371 bits (952), Expect = e-124
Identities = 177/209 (84%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH+ GEAYN++TLT+VQRN +KDLA LGLVKLQQGRKESWFIPTKL TNLSV
Sbjct: 227 ISFLLELSFHATGEAYNMNTLTEVQRNTLKDLADLGLVKLQQGRKESWFIPTKLTTNLSV 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRK+G+VVVETNFR+YAYSTSKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 287 SLTDSSSRKEGFVVVETNFRIYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
F+NGI+AEQIISFLQQNAHPRV+E+ P+VPENVTDQIRLWE+D NRVEMTP+H Y++FP+
Sbjct: 347 FDNGITAEQIISFLQQNAHPRVSERVPSVPENVTDQIRLWESDLNRVEMTPAHFYDEFPT 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+ GLLWEDSKKMRL+V
Sbjct: 407 RDVFEAACDFAREYGGLLWEDSKKMRLVV 435
Score = 94.4 bits (233), Expect = 3e-18
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
+ALEQWECFLLQLI+S QAE+ TN S SMMR+FQRGLL+ R+ E PRLTE+GFQFLLM
Sbjct: 142 FALEQWECFLLQLINSTQAEKMTNISPSMMRIFQRGLLTQRDKEPPRLTESGFQFLLM 199
>ref|XP_010057306.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Eucalyptus grandis]
gb|KCW74429.1| hypothetical protein EUGRSUZ_E03123 [Eucalyptus grandis]
Length = 454
Score = 371 bits (952), Expect = e-124
Identities = 177/209 (84%), Positives = 201/209 (96%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH+ GEAYN++TLT+VQRN +KDLA LGLVKLQQGRKESWFIPTKL TNLSV
Sbjct: 229 ISFLLELSFHATGEAYNMNTLTEVQRNTLKDLADLGLVKLQQGRKESWFIPTKLTTNLSV 288
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+D+SSRK+G+VVVETNFR+YAYSTSKLHCEILRLFSRIEYQLPNLIVG+ITKESLYNA
Sbjct: 289 SLTDSSSRKEGFVVVETNFRIYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNA 348
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
F+NGI+A+QIISFLQQNAHPRVAE+ P+VPENVTDQIRLWE+D NRVEMTP+H Y++FP+
Sbjct: 349 FDNGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFYDEFPT 408
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
+DVFEAACDFARE+ GLLWEDSKKMRL+V
Sbjct: 409 RDVFEAACDFAREYGGLLWEDSKKMRLVV 437
Score = 94.4 bits (233), Expect = 3e-18
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
+ALEQWECFLLQLI+S QAE+ TN S SMMR+FQRGLL+ R+ E PRLTE+GFQFLLM
Sbjct: 144 FALEQWECFLLQLINSTQAEKMTNISPSMMRIFQRGLLTQRDKEPPRLTESGFQFLLM 201
>ref|XP_006653885.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Oryza brachyantha]
Length = 451
Score = 370 bits (949), Expect = e-124
Identities = 182/209 (87%), Positives = 198/209 (94%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH++GEAY+L+TLTDVQRNAI+DLA LGLVKLQQGRK+SWFIPTKLATNLS
Sbjct: 227 ISFLLELSFHTLGEAYSLNTLTDVQRNAIRDLAELGLVKLQQGRKDSWFIPTKLATNLSA 286
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SLSD+SS K+G+VVVETNFRMYAYSTSKLHCEILRLFSR+EYQLPNLIVGSITKESLY A
Sbjct: 287 SLSDSSSSKEGFVVVETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGSITKESLYGA 346
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
FENGI+AEQIISFLQQNAHPRVA+K PAVPENVTDQIRLWETDRNRVEMT SHLYEDFPS
Sbjct: 347 FENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVEMTLSHLYEDFPS 406
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
KD+FE CD+AR+ LLWED+KKMRLIV
Sbjct: 407 KDMFEQCCDYARDHGCLLWEDAKKMRLIV 435
Score = 103 bits (257), Expect = 2e-21
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSRENEAPRLTENGFQFLLM 175
YALEQWECFLLQLI+S+Q ER T+FSSSMMR FQRGLLSSR+ EAPRLTENGFQFLLM
Sbjct: 142 YALEQWECFLLQLINSSQVERGTSFSSSMMRTFQRGLLSSRDGEAPRLTENGFQFLLM 199
>gb|PIN26766.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, subunit TFB2 [Handroanthus
impetiginosus]
Length = 453
Score = 370 bits (949), Expect = e-124
Identities = 178/209 (85%), Positives = 199/209 (95%)
Frame = +3
Query: 210 ISFLLELSFHSMGEAYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSV 389
ISFLLELSFH G+AYNL+TL+D+QRN IKDLA LGLVKLQQGRKESWFIPTKLATNLS+
Sbjct: 228 ISFLLELSFHVTGQAYNLNTLSDIQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSI 287
Query: 390 SLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNA 569
SL+DTSSRKQG+VVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVG+ITKESLY A
Sbjct: 288 SLADTSSRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYKA 347
Query: 570 FENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRLWETDRNRVEMTPSHLYEDFPS 749
F+NGI+AEQI+SFLQQNAHPRVAE+ P VPENVTDQIRLWE+D NRVEM P+HLY++FPS
Sbjct: 348 FQNGITAEQIVSFLQQNAHPRVAERIPTVPENVTDQIRLWESDLNRVEMAPAHLYDEFPS 407
Query: 750 KDVFEAACDFAREFSGLLWEDSKKMRLIV 836
++VFEAACDFARE+ GLLWE+SKKMRL+V
Sbjct: 408 REVFEAACDFAREYGGLLWENSKKMRLVV 436
Score = 82.0 bits (201), Expect = 6e-14
Identities = 41/59 (69%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 YALEQWECFLLQLISSAQAERPTNFSSSMMRVFQRGLLSSR-ENEAPRLTENGFQFLLM 175
YA +QWE FLL LI+SA+ E+ TN SSMM+VFQRGLLS R E E P+LTE+GFQFLLM
Sbjct: 142 YAAQQWELFLLHLINSAEVEKSTNIRSSMMKVFQRGLLSQRDEKEPPKLTESGFQFLLM 200
>gb|OAY83764.1| General transcription factor IIH subunit 4 [Ananas comosus]
Length = 418
Score = 367 bits (943), Expect = e-123
Identities = 187/230 (81%), Positives = 201/230 (87%), Gaps = 21/230 (9%)
Frame = +3
Query: 210 ISFLLELSFHSMGE---------------------AYNLSTLTDVQRNAIKDLASLGLVK 326
ISFLLELSFH++GE YNL+TLTDVQRNAIKDLA LGLVK
Sbjct: 172 ISFLLELSFHTLGELLLVAVLCCANCKFFMFLAIITYNLNTLTDVQRNAIKDLADLGLVK 231
Query: 327 LQQGRKESWFIPTKLATNLSVSLSDTSSRKQGYVVVETNFRMYAYSTSKLHCEILRLFSR 506
LQQGRKESWFIPTKLATNLSVSL+D+SSRK+G+VVVETNFRMYAYSTS+LH EILRLFSR
Sbjct: 232 LQQGRKESWFIPTKLATNLSVSLTDSSSRKEGFVVVETNFRMYAYSTSRLHSEILRLFSR 291
Query: 507 IEYQLPNLIVGSITKESLYNAFENGISAEQIISFLQQNAHPRVAEKTPAVPENVTDQIRL 686
IEYQLPNLIVG+ITKESLYNAFENGI+AEQI+SFLQQNAHPRVAEK P VPENVTDQIRL
Sbjct: 292 IEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAEKIPTVPENVTDQIRL 351
Query: 687 WETDRNRVEMTPSHLYEDFPSKDVFEAACDFAREFSGLLWEDSKKMRLIV 836
WETDRNRVEM PSHLYEDFPSKD+FEA CDFARE++ LLWEDSKKMRLIV
Sbjct: 352 WETDRNRVEMIPSHLYEDFPSKDLFEACCDFAREYNCLLWEDSKKMRLIV 401