BLASTX nr result

ID: Ophiopogon22_contig00004309 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00004309
         (468 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK57198.1| uncharacterized protein A4U43_C10F17610 [Asparagu...    76   5e-13
ref|XP_020248097.1| THO complex subunit 1 isoform X2 [Asparagus ...    76   5e-13
ref|XP_020248096.1| THO complex subunit 1 isoform X1 [Asparagus ...    76   5e-13
gb|OVA19210.1| THO complex [Macleaya cordata]                          65   2e-09
gb|PKA48241.1| Rhodanese-like domain-containing protein 8, chlor...    55   6e-06

>gb|ONK57198.1| uncharacterized protein A4U43_C10F17610 [Asparagus officinalis]
          Length = 653

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
 Frame = -1

Query: 468 GGELEDGAAPMDSDAVALNITQGGDTTPEESAKQSPDMDMGQET------GQSXXXXXXX 307
           G ELE+GA PM+SDA  LNI QGGDTTPE++ KQSPD+DMGQE        ++       
Sbjct: 561 GAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHSEAEAEAEADAEAD 620

Query: 306 XXXXXXXXAKPNVKADAEPEPSHQS 232
                   AKP++K D E E S  S
Sbjct: 621 AEAEAEAEAKPDIKGDTESELSPDS 645


>ref|XP_020248097.1| THO complex subunit 1 isoform X2 [Asparagus officinalis]
          Length = 662

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
 Frame = -1

Query: 468 GGELEDGAAPMDSDAVALNITQGGDTTPEESAKQSPDMDMGQET------GQSXXXXXXX 307
           G ELE+GA PM+SDA  LNI QGGDTTPE++ KQSPD+DMGQE        ++       
Sbjct: 570 GAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHSEAEAEAEADAEAD 629

Query: 306 XXXXXXXXAKPNVKADAEPEPSHQS 232
                   AKP++K D E E S  S
Sbjct: 630 AEAEAEAEAKPDIKGDTESELSPDS 654


>ref|XP_020248096.1| THO complex subunit 1 isoform X1 [Asparagus officinalis]
          Length = 663

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
 Frame = -1

Query: 468 GGELEDGAAPMDSDAVALNITQGGDTTPEESAKQSPDMDMGQET------GQSXXXXXXX 307
           G ELE+GA PM+SDA  LNI QGGDTTPE++ KQSPD+DMGQE        ++       
Sbjct: 571 GAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHSEAEAEAEADAEAD 630

Query: 306 XXXXXXXXAKPNVKADAEPEPSHQS 232
                   AKP++K D E E S  S
Sbjct: 631 AEAEAEAEAKPDIKGDTESELSPDS 655


>gb|OVA19210.1| THO complex [Macleaya cordata]
          Length = 619

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -1

Query: 465 GELEDGAAPMDSDAVALNITQGGDTTPEESAKQSPDMDMGQETGQS 328
           GELED A PMD+DAV +NI+Q G  TPEE+ K SP+ D+GQE GQS
Sbjct: 547 GELEDSAVPMDADAVGVNISQSGAPTPEENLKLSPNADLGQEAGQS 592


>gb|PKA48241.1| Rhodanese-like domain-containing protein 8, chloroplastic
           [Apostasia shenzhenica]
          Length = 915

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 33/75 (44%), Positives = 39/75 (52%)
 Frame = -1

Query: 468 GGELEDGAAPMDSDAVALNITQGGDTTPEESAKQSPDMDMGQETGQSXXXXXXXXXXXXX 289
           G EL+D AAPMDSDA  L  +     +PEE  KQSPD D+GQE  QS             
Sbjct: 445 GTELDDAAAPMDSDAAILASSHCPAISPEEGQKQSPDTDLGQEAVQS----------EPE 494

Query: 288 XXAKPNVKADAEPEP 244
              +  +KADA  EP
Sbjct: 495 AEVETEIKADARQEP 509


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