BLASTX nr result
ID: Ophiopogon22_contig00004059
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00004059
(1861 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 133 5e-45
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 133 6e-45
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo... 114 1e-43
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 125 1e-41
dbj|GAU51472.1| hypothetical protein TSUD_95870 [Trifolium subte... 122 3e-41
gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposo... 119 5e-41
gb|KYP69326.1| Retrovirus-related Pol polyprotein from transposo... 119 5e-41
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 117 7e-41
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 118 2e-40
gb|PNX61902.1| retrovirus-related Pol polyprotein from transposo... 119 2e-40
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 123 3e-39
emb|CAH66031.1| H0515C11.7 [Oryza sativa] 116 3e-39
emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera] 107 5e-39
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 112 6e-39
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 116 8e-39
dbj|GAU37926.1| hypothetical protein TSUD_269410 [Trifolium subt... 114 2e-38
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 112 2e-38
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 118 2e-38
gb|KYP57718.1| Retrovirus-related Pol polyprotein from transposo... 122 2e-38
emb|CAN73703.1| hypothetical protein VITISV_000540 [Vitis vinifera] 102 7e-38
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 133 bits (335), Expect(2) = 5e-45
Identities = 78/177 (44%), Positives = 105/177 (59%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYLRG AD+ L++ + + + V GYVD+DYAGDLD RRS TGYVFT G +
Sbjct: 1666 ILRYLRGSADLCLVYDQSDCTSSVT--GYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKA 1723
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ ++ + S G+ QD V CDSQSAIHL K+Q +
Sbjct: 1724 VLQSTVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMF 1783
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIHV 1128
H+RTKHIDVRYH +R+ V + ++ + K+ T+KNPADM+TK IP KFK LD I +
Sbjct: 1784 HERTKHIDVRYHFVREHVTQGDIV-ISKVATEKNPADMLTKVIPAYKFKHCLDLIGI 1839
Score = 79.0 bits (193), Expect(2) = 5e-45
Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPE-KDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL ++ PQS E K +MS +PY+ VGS+MYAM C R D+++A+SVVSR+MS
Sbjct: 1597 LAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCPG 1656
Query: 1684 KQH*EAVKWFLDTCEG 1637
K+H +AVKW L G
Sbjct: 1657 KEHWQAVKWILRYLRG 1672
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 133 bits (334), Expect(2) = 6e-45
Identities = 78/175 (44%), Positives = 104/175 (59%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYLRG AD+ L++ + + + V GYVD+DYAGDLD RRS TGYVFT G +
Sbjct: 1645 ILRYLRGSADLCLVYDQSDCTSSVT--GYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKA 1702
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ ++ + S G+ QD V CDSQSAIHL K+Q +
Sbjct: 1703 VLQSTVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMF 1762
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFI 1134
H+RTKHIDVRYH +R+ V + ++ + K+ T+KNPADM+TK IP KFK LD I
Sbjct: 1763 HERTKHIDVRYHFVREHVTQGDIV-ISKVATEKNPADMLTKVIPAYKFKHCLDLI 1816
Score = 79.0 bits (193), Expect(2) = 6e-45
Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPE-KDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL ++ PQS E K +MS +PY+ VGS+MYAM C R D+++A+SVVSR+MS
Sbjct: 1576 LAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCPG 1635
Query: 1684 KQH*EAVKWFLDTCEG 1637
K+H +AVKW L G
Sbjct: 1636 KEHWQAVKWILRYLRG 1651
>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
baccatum]
Length = 1526
Score = 114 bits (284), Expect(2) = 1e-43
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLF--QRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVG 1485
+LRYL+G D+GL+F QR + G V GYVD DY GDLD RRS + Y+FT+
Sbjct: 815 ILRYLKGSPDIGLVFDRQRSDPGGVV---GYVDADYGGDLDRRRSLSAYIFTLCGSAISW 871
Query: 1484 RRSCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQ 1305
S + + ++ R + G+ Q + + CDSQ+A+HLA+++
Sbjct: 872 YSSLQAIAALSTTEAEYIAATEGVKEAIWLRGLVAELGLQQHILVMFCDSQTAVHLARNR 931
Query: 1304 RYHKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIHVL 1125
++H +TKHID++ H +R VD + I + KI T +NPADM+TK +P KF LD L
Sbjct: 932 KHHSKTKHIDIKCHFIRDIVDAGE-ITVEKIHTTENPADMLTKPLPAAKFDHCLDLADYL 990
Score = 94.0 bits (232), Expect(2) = 1e-43
Identities = 49/76 (64%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL S QCPQS E+ MS VPY+ VGSLMYAM C R DLAYA+SVVSRFM N
Sbjct: 746 LAAHFKLSSDQCPQSEEEQRRMSHVPYSNAVGSLMYAMVCTRPDLAYAVSVVSRFMHNPG 805
Query: 1684 KQH*EAVKWFLDTCEG 1637
KQH E+VKW L +G
Sbjct: 806 KQHWESVKWILRYLKG 821
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 125 bits (315), Expect(2) = 1e-41
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 4/182 (2%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYL G DVGLLF++ Q GY D+D+AGDLD +RST+GYVFT+ G SV R
Sbjct: 121 ILRYLYGTVDVGLLFKK---NCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGG-SVSWR 176
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYF----GIIQDSVQVHCDSQSAIHLAK 1311
S + + L T ++ + W G+IQ+++ V CD+QSAI LAK
Sbjct: 177 SILQSTIALS---TTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAK 233
Query: 1310 DQRYHKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
+Q YH RTKHIDV+YH +R+ ++ V+ + KI TK NP+DM+TK + KF+ L I
Sbjct: 234 NQTYHARTKHIDVKYHYVREIIEGGDVL-LKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQ 292
Query: 1130 VL 1125
+L
Sbjct: 293 IL 294
Score = 75.1 bits (183), Expect(2) = 1e-41
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPE-KDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL S CP+S E +D M+ VPYA VVGSL+YAM C R D++ A+S+VSR+M N
Sbjct: 52 LALHFKLSSSSCPRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPG 111
Query: 1684 KQH*EAVKWFL 1652
K AVKW L
Sbjct: 112 KSQWLAVKWIL 122
>dbj|GAU51472.1| hypothetical protein TSUD_95870 [Trifolium subterraneum]
Length = 1682
Score = 122 bits (306), Expect(2) = 3e-41
Identities = 67/176 (38%), Positives = 103/176 (58%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
VLRYL G GL +++++ G L+GYVD DY G++D R+S +G+VFT+ +
Sbjct: 1076 VLRYLNGSLKGGLRYKKIDPGKDA-LEGYVDADYVGNVDTRKSLSGFVFTLFGTAVTWKA 1134
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ + + + ++ + GI Q V++HCDSQS IHLA Q Y
Sbjct: 1135 NQQSVVALSTTQAEYIALVEGVKEAIWLKGMIGEMGISQGCVKIHCDSQSVIHLANHQVY 1194
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
H+RTKHID+R H +R ++ ++I + K+ +K+NPADM TK++P KFK LD I+
Sbjct: 1195 HERTKHIDIRLHFVRDMIETKEII-VEKVASKENPADMFTKSLPRVKFKHCLDLIN 1249
Score = 77.4 bits (189), Expect(2) = 3e-41
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = -1
Query: 1852 HFKLFSKQCPQSP-EKDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF*KQH 1676
H KL KQCPQS E+ +M PYA VGS+MY M C+R DL+YA+SVVSRFM+N + H
Sbjct: 1010 HSKLSIKQCPQSEDERKKMESTPYASGVGSIMYGMVCSRPDLSYAISVVSRFMANPGQVH 1069
Query: 1675 *EAVKWFLDTCEG 1637
+A+KW L G
Sbjct: 1070 WQALKWVLRYLNG 1082
>gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 523
Score = 119 bits (298), Expect(2) = 5e-41
Identities = 67/169 (39%), Positives = 99/169 (58%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYLRG + L F + ++++QGYVD DY G++D RRSTTGY+FTV
Sbjct: 350 ILRYLRGTTERCLHFGK----GKIKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMS 405
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+K+ ++L + + G IQ+ +H DSQSAIHLAK+ +
Sbjct: 406 QVQKIVALSTTEAEYVAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAF 465
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFK 1152
H RTKHID+RYH +R ++ D+V+ + KI +NPADM+TK + ++K K
Sbjct: 466 HSRTKHIDIRYHFIRSLLE-DEVLTLKKILGSRNPADMLTKVVTIDKLK 513
Score = 79.7 bits (195), Expect(2) = 5e-41
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HF+L Q PQ+ E+ M++VPYA +GSLMYAM C R D+ +A+ VVSRFMSN
Sbjct: 281 LASHFRLSKDQSPQTEEERYFMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPG 340
Query: 1684 KQH*EAVKWFLDTCEG 1637
K H EAVKW L G
Sbjct: 341 KAHWEAVKWILRYLRG 356
>gb|KYP69326.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 389
Score = 119 bits (298), Expect(2) = 5e-41
Identities = 67/169 (39%), Positives = 99/169 (58%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYLRG + L F + ++++QGYVD DY G++D RRSTTGY+FTV
Sbjct: 216 ILRYLRGTTERCLHFGK----GKIKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMS 271
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+K+ ++L + + G IQ+ +H DSQSAIHLAK+ +
Sbjct: 272 QVQKIVALSTTEAEYVAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAF 331
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFK 1152
H RTKHID+RYH +R ++ D+V+ + KI +NPADM+TK + ++K K
Sbjct: 332 HSRTKHIDIRYHFIRSLLE-DEVLTLKKILGSRNPADMLTKVVTIDKLK 379
Score = 79.7 bits (195), Expect(2) = 5e-41
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HF+L Q PQ+ E+ M++VPYA +GSLMYAM C R D+ +A+ VVSRFMSN
Sbjct: 147 LASHFRLSKDQSPQTEEERYFMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPG 206
Query: 1684 KQH*EAVKWFLDTCEG 1637
K H EAVKW L G
Sbjct: 207 KAHWEAVKWILRYLRG 222
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 117 bits (292), Expect(2) = 7e-41
Identities = 67/169 (39%), Positives = 98/169 (57%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYLR + L F + ++++QGYVD D+AG++D RRSTTGY+FTV
Sbjct: 1096 ILRYLRATKEKCLCFSK----GELKVQGYVDADFAGEIDHRRSTTGYIFTVGTTAVSWMS 1151
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+K+ ++L + + G IQ+ +H DSQSAIHLAK+ +
Sbjct: 1152 QIQKIVALSTTEAEYVAVTEASKELIWLQGLLTELGFIQERSVLHSDSQSAIHLAKNSTF 1211
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFK 1152
H RTKHID+RYH +R ++ D+V+ + KI KNPADM+TK + EK +
Sbjct: 1212 HSRTKHIDLRYHFIRSLLE-DEVLTLRKILGSKNPADMLTKVVTTEKLR 1259
Score = 81.6 bits (200), Expect(2) = 7e-41
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HF+L + Q P++ E+ E M++ PYA +GSLMYAM C R D+ YA+ VVSRFMSN
Sbjct: 1027 LASHFRLSTDQSPKTEEEKELMAKTPYASAIGSLMYAMVCTRPDIGYAVGVVSRFMSNPG 1086
Query: 1684 KQH*EAVKWFL 1652
K H EAVKW L
Sbjct: 1087 KAHWEAVKWIL 1097
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 118 bits (295), Expect(2) = 2e-40
Identities = 70/172 (40%), Positives = 97/172 (56%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+ RYLRG D G+ F + + V+ GYVD DYAGDLD RRST GYVFT+ G +
Sbjct: 235 IFRYLRGTTDYGITFSKQQSDPSVK--GYVDADYAGDLDERRSTIGYVFTLGGGPICWKS 292
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ L + ++ GI Q VQ++ D+QSAI+L K+Q Y
Sbjct: 293 MIQSLVALYTTKSEYMAIAETTKESLWLTGLVKELGIQQGGVQLYFDNQSAIYLEKNQVY 352
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSAL 1143
H RTKHIDVR+HK+ + V +++ + K+ T +N ADM+TK + EKFK L
Sbjct: 353 HARTKHIDVRFHKISELVSSGELL-LKKVHTSENAADMLTKPVTTEKFKHCL 403
Score = 79.0 bits (193), Expect(2) = 2e-40
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSP-EKDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HF+L + QCP++ E ++MS+VPYA VG LMYAM C R DLA+A+SVVS+F+SN
Sbjct: 166 LANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVCTRLDLAHAVSVVSKFLSNPG 225
Query: 1684 KQH*EAVKWFLDTCEG 1637
+ + +AVKW G
Sbjct: 226 RMNWDAVKWIFRYLRG 241
>gb|PNX61902.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 275
Score = 119 bits (299), Expect(2) = 2e-40
Identities = 66/176 (37%), Positives = 104/176 (59%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
VLRYL G GL +++++ L+GYVD DYAG++D R+S +G+VFT+ +
Sbjct: 99 VLRYLNGSLKGGLRYKKIDPRKDA-LEGYVDADYAGNVDTRKSLSGFVFTLFGTAVTWKA 157
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ + + + ++ + GI Q V++HCDSQSAIHLA Q Y
Sbjct: 158 NQQSVVALSTTQAEYIALVEGVKEAIWLKGMIGELGIGQGCVKIHCDSQSAIHLANHQVY 217
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
H+RTKHID+R H +R ++ ++I + K+ +++NPADM TK++P +FK LD I+
Sbjct: 218 HERTKHIDIRLHFVRDMIETKEII-VEKVASEENPADMFTKSLPRSRFKHCLDLIN 272
Score = 77.4 bits (189), Expect(2) = 2e-40
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = -1
Query: 1852 HFKLFSKQCPQSP-EKDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF*KQH 1676
H KL KQCPQS E+ +M PYA VGS+MY M C+R DL+YA+SVVSRFM+N + H
Sbjct: 33 HSKLSIKQCPQSEDERKKMESTPYASGVGSIMYGMVCSRPDLSYAISVVSRFMANPGQVH 92
Query: 1675 *EAVKWFLDTCEG 1637
+A+KW L G
Sbjct: 93 WQALKWVLRYLNG 105
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 123 bits (308), Expect(2) = 3e-39
Identities = 73/177 (41%), Positives = 100/177 (56%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+ RYLRG +DVGL++ Q + GY D+DYAGD+D RRS TGYVFT+ + +
Sbjct: 1135 IFRYLRGTSDVGLIYGG---DTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKA 1191
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ + ++ + S G+ D V+CDS SAI LAKDQ +
Sbjct: 1192 TLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVH 1251
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIHV 1128
H+RTKHIDVRYH LR +K I + K+GT NPADM TK +P KF+ LD +++
Sbjct: 1252 HERTKHIDVRYHFLRS----EKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNI 1304
Score = 70.1 bits (170), Expect(2) = 3e-39
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -1
Query: 1858 AGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF*K 1682
A + L + PQS E+ E MSRVPYA VGSLMYAM C R DLA+A+SVVSRFM +
Sbjct: 1067 AANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGR 1126
Query: 1681 QH*EAVK 1661
+H +AVK
Sbjct: 1127 EHWQAVK 1133
>emb|CAH66031.1| H0515C11.7 [Oryza sativa]
Length = 293
Score = 116 bits (290), Expect(2) = 3e-39
Identities = 70/182 (38%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+ RYLRG D L F R ++G L GYVD+D+A DLD RRS TGYVFT+ +
Sbjct: 120 IFRYLRGTTDACLKFGRTDKG----LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKA 175
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGI----IQDSVQVHCDSQSAIHLAK 1311
+ + + + T ++ + C W + + + CDSQSAI L K
Sbjct: 176 TLQPI----VAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTK 231
Query: 1310 DQRYHKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
DQ +H+RTKHID++YH +R V + K + + KI T NPADMMTK +PV KF+ +
Sbjct: 232 DQMFHERTKHIDIKYHYVRDVVAQGK-LKVCKISTHDNPADMMTKPVPVAKFELCSSLVG 290
Query: 1130 VL 1125
++
Sbjct: 291 IV 292
Score = 77.0 bits (188), Expect(2) = 3e-39
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL + QC + E E MSRVPY+ VGSLMYAM C+R DL++A+S+VSR+M+N
Sbjct: 51 IAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPG 110
Query: 1684 KQH*EAVKWFLDTCEG 1637
K+H +A+ W G
Sbjct: 111 KEHWKAIHWIFRYLRG 126
>emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera]
Length = 575
Score = 107 bits (268), Expect(2) = 5e-39
Identities = 66/178 (37%), Positives = 97/178 (54%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYL+G D L F G ++LQGYVD D AGD+D R+STTG+VFT+
Sbjct: 402 ILRYLKGSLDTYLCFT----GASLKLQGYVDADXAGDIDSRKSTTGFVFTLCGTAISWTS 457
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ +K+ +++ + G Q+ +H DSQSAI LAK+ +
Sbjct: 458 NLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSTF 517
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIHVL 1125
H ++KHI +YH +R V+ DK++ + KI KNPADM+TK + +EK K I +L
Sbjct: 518 HSKSKHIQTKYHFIRYLVE-DKLVILEKICGSKNPADMLTKGVTIEKLKLCATSIGLL 574
Score = 84.7 bits (208), Expect(2) = 5e-39
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPE-KDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+ HFKL +Q P++ E +D MS+VPYA +GSLMYAM C R D+A+A+ VVS+FMS
Sbjct: 333 LGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSKFMSRPV 392
Query: 1684 KQH*EAVKWFLDTCEG 1637
KQH EAVKW L +G
Sbjct: 393 KQHWEAVKWILRYLKG 408
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 112 bits (279), Expect(2) = 6e-39
Identities = 74/181 (40%), Positives = 101/181 (55%), Gaps = 4/181 (2%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+ RYLRG + L F R +G L GYVD+D+AGDLD RRS TGYVFTV G +V +
Sbjct: 1068 IFRYLRGTSSACLQFGRSSDG----LVGYVDSDFAGDLDRRRSLTGYVFTV-GGCAVSWK 1122
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*S--YFGI--IQDSVQVHCDSQSAIHLAK 1311
+ + + L T ++ + C W Y + + + + CDSQSAI L K
Sbjct: 1123 ASLQATVALS---TTEAEYMAISEACKEVIWLRGLYTELCGVTSCINIFCDSQSAICLTK 1179
Query: 1310 DQRYHKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
DQ +H+RTKHID+RYH +R V + + + KI T NP DMMTK +P KF+ +
Sbjct: 1180 DQMFHERTKHIDLRYHFIR-GVIAEGDVKVCKISTHDNPVDMMTKPVPATKFELCSSLVG 1238
Query: 1130 V 1128
V
Sbjct: 1239 V 1239
Score = 80.1 bits (196), Expect(2) = 6e-39
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HF+L S CPQS E MSRVPY+ V SLMYAM C+R DL++ALSVVSR+M+N
Sbjct: 999 LAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPG 1058
Query: 1684 KQH*EAVKWFLDTCEG 1637
K+H +AV+W G
Sbjct: 1059 KEHWKAVQWIFRYLRG 1074
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 116 bits (291), Expect(2) = 8e-39
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 4/182 (2%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+ RYLRG AD L F R+++G L GYVD+D+A DLD RRS TGYVFT+ +
Sbjct: 1149 IFRYLRGTADACLKFGRIDKG----LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKA 1204
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGI----IQDSVQVHCDSQSAIHLAK 1311
+ + + + T ++ + C W + + + CDSQSAI L K
Sbjct: 1205 TLQPV----VAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTK 1260
Query: 1310 DQRYHKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
DQ +H+RTKHID++YH +R V + K + + KI NPADMMTK IPV KF+ +
Sbjct: 1261 DQMFHERTKHIDIKYHYVRDIVAQGK-LKVCKISIHDNPADMMTKPIPVAKFELCSSLVG 1319
Query: 1130 VL 1125
++
Sbjct: 1320 IV 1321
Score = 75.1 bits (183), Expect(2) = 8e-39
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL + QC + E E MSRVPY+ VGSLMYAM C+ DL++A+S+VSR+M+N
Sbjct: 1080 IAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPG 1139
Query: 1684 KQH*EAVKWFLDTCEG 1637
K+H +AV+W G
Sbjct: 1140 KEHWKAVQWIFRYLRG 1155
>dbj|GAU37926.1| hypothetical protein TSUD_269410 [Trifolium subterraneum]
Length = 1333
Score = 114 bits (285), Expect(2) = 2e-38
Identities = 65/176 (36%), Positives = 102/176 (57%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
VLRYL G GL ++R + G L+GYV+ DYAG++D R+S + +VFT+ +
Sbjct: 1157 VLRYLNGSLKGGLKYRRTDPGRDA-LEGYVNADYAGNVDTRKSLSSFVFTLFGTAVTLKA 1215
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ + + + ++ + GI Q V++HC+SQSAIHLA Q Y
Sbjct: 1216 NQQSVVALSTTQAEYIALVEGVKEAIWLKGMIGEMGISQGCVRIHCNSQSAIHLANHQVY 1275
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
H+RTKHID+R H +R ++ ++I K+ +++NPADM K++P KFK +LD I+
Sbjct: 1276 HERTKHIDIRLHFVRDMIETKEII-AEKVASEENPADMFPKSLPRVKFKHSLDLIN 1330
Score = 76.3 bits (186), Expect(2) = 2e-38
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = -1
Query: 1852 HFKLFSKQCPQSP-EKDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF*KQH 1676
H KL KQCPQS E+ +M PYA VGS+MY M C+R DL+YA+SVVSRFM+N + H
Sbjct: 1091 HSKLSIKQCPQSEDERKKMETNPYASGVGSIMYGMVCSRPDLSYAISVVSRFMANPGQVH 1150
Query: 1675 *EAVKWFLDTCEG 1637
+A+KW L G
Sbjct: 1151 WQALKWVLRYLNG 1163
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1175
Score = 112 bits (279), Expect(2) = 2e-38
Identities = 69/182 (37%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+ RYLR A+ L F R +G L GYVD+D+A DLD RRS TGYVFT+ +
Sbjct: 1002 IFRYLRDTANACLKFGRTNKG----LIGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKA 1057
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGI----IQDSVQVHCDSQSAIHLAK 1311
+ R ++ + T ++ + C W + + + CDSQSAI L K
Sbjct: 1058 TLR----HVVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVYSCINLFCDSQSAICLTK 1113
Query: 1310 DQRYHKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFIH 1131
DQ +H+RTKHID++YH +R V + K + + KI T NP DMMTK +PV KF+ +
Sbjct: 1114 DQMFHERTKHIDIKYHYVRDVVAQGK-LKVCKISTHDNPVDMMTKHVPVAKFELCSSLVG 1172
Query: 1130 VL 1125
++
Sbjct: 1173 IV 1174
Score = 78.6 bits (192), Expect(2) = 2e-38
Identities = 39/69 (56%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPEKDE-MSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL + QC + E E MSRVPY+ VVGSLMYAM C+R DL++A+S+VSR+M+N
Sbjct: 933 IAPHFKLSALQCASTDEDVEYMSRVPYSSVVGSLMYAMVCSRLDLSHAMSLVSRYMANPG 992
Query: 1684 KQH*EAVKW 1658
K+H +A++W
Sbjct: 993 KEHWKAIQW 1001
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 118 bits (296), Expect(2) = 2e-38
Identities = 70/163 (42%), Positives = 96/163 (58%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRY+ D+GLLF++ + + GYVD+DYAGDLD RRSTTGYVFT+ G +
Sbjct: 844 ILRYIHKTMDIGLLFKQDTTLGKCVV-GYVDSDYAGDLDKRRSTTGYVFTLAGGPISWKS 902
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ + ++ + G++Q+ V+CDSQSAIHLAK+Q Y
Sbjct: 903 TLQSTVALSTTEAEYMAVTEAVKEAIWLQGMVKTLGLVQEHFNVYCDSQSAIHLAKNQVY 962
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAI 1170
H RTKHIDVR+H +R+ +D K I + KI T N ADMMTK +
Sbjct: 963 HARTKHIDVRFHFVREIIDEGK-IHLQKIKTADNLADMMTKVL 1004
Score = 72.0 bits (175), Expect(2) = 2e-38
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQS-PEKDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+A HFKL ++ P + E++ M +VPY+ VGSLMYAM C R D++ A+S+VSR+M N
Sbjct: 775 LASHFKLSAQLSPSTNTEQEYMLQVPYSNAVGSLMYAMVCTRPDISQAVSIVSRYMHNPG 834
Query: 1684 KQH*EAVKWFL 1652
K H +AVKW L
Sbjct: 835 KGHWQAVKWIL 845
>gb|KYP57718.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 418
Score = 122 bits (305), Expect(2) = 2e-38
Identities = 67/175 (38%), Positives = 106/175 (60%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRY+ G + GLL+++ +G ++G+VD DYAG +D R+S +GYVFT+ +
Sbjct: 243 MLRYVNGTLESGLLYRKRHQGGAA-IEGFVDADYAGCVDTRKSLSGYVFTLFGTAVSWKA 301
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ + + ++ + + GI Q+ VQ+HCDSQSAIHLA Q Y
Sbjct: 302 NLQSVVALSTTEAEYIALAEGVKEGLWLKGMLNELGIEQECVQIHCDSQSAIHLANHQMY 361
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFKSALDFI 1134
H+RTKHIDV++H +R+ V+ + +VKI ++ NPADM+TK++P KF+ LD +
Sbjct: 362 HERTKHIDVKHHFIREVVETG-TVRIVKIASEDNPADMLTKSLPRCKFERCLDLV 415
Score = 68.2 bits (165), Expect(2) = 2e-38
Identities = 38/73 (52%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = -1
Query: 1852 HFKLFSKQCPQSP-EKDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF*KQH 1676
H KL Q P S E+ M VPYA VGS+MY M C R DLA+A+SVVSRFM N + H
Sbjct: 177 HTKLSRSQAPVSEDERRRMDVVPYASGVGSIMYGMVCTRPDLAHAVSVVSRFMGNPGQAH 236
Query: 1675 *EAVKWFLDTCEG 1637
E +KW L G
Sbjct: 237 WETLKWMLRYVNG 249
>emb|CAN73703.1| hypothetical protein VITISV_000540 [Vitis vinifera]
Length = 612
Score = 102 bits (255), Expect(2) = 7e-38
Identities = 62/169 (36%), Positives = 94/169 (55%)
Frame = -3
Query: 1658 VLRYLRGIADVGLLFQRLEEGNQVQLQGYVDTDYAGDLDLRRSTTGYVFTVVKGLSVGRR 1479
+LRYL+G D L F G ++LQGYVD D+AGD+D R+STTG+VFT+
Sbjct: 439 ILRYLKGSLDACLCFT----GASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTTISWAS 494
Query: 1478 SCRKL*LYLPRRPNT*QQWRHRRKLCG*RDW*SYFGIIQDSVQVHCDSQSAIHLAKDQRY 1299
+ +K+ +++ + G Q+ +H SQSAI LAK+ +
Sbjct: 495 NLQKIVTLSTIEAEYVAAIEAGKEMIWLHGFLDELGKKQEIGILHSVSQSAIFLAKNSAF 554
Query: 1298 HKRTKHIDVRYHKLRQWVDRDKVIDMVKIGTKKNPADMMTKAIPVEKFK 1152
H ++KHI +YH +R ++ DK++ + KI KNPADM+TK + +EK K
Sbjct: 555 HSKSKHIQTKYHFIR-YIVEDKLVILEKICGSKNPADMLTKGVTIEKLK 602
Score = 85.9 bits (211), Expect(2) = 7e-38
Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -1
Query: 1861 MAGHFKLFSKQCPQSPE-KDEMSRVPYAYVVGSLMYAMACARSDLAYALSVVSRFMSNF* 1685
+ HFKL +Q P++ E ++ MS+VPYA +GSLMYAM C RSD+A+A+ VVSRFMS
Sbjct: 370 LGSHFKLSKEQSPKTEEERNNMSKVPYASAIGSLMYAMVCTRSDIAHAVGVVSRFMSRPG 429
Query: 1684 KQH*EAVKWFLDTCEG 1637
KQH EAVKW L +G
Sbjct: 430 KQHWEAVKWILRYLKG 445