BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00003457
         (3621 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263709.1| DNA-directed RNA polymerase I subunit 2 isof...  1999   0.0  
ref|XP_020263708.1| DNA-directed RNA polymerase I subunit 2 isof...  1995   0.0  
gb|ONK73747.1| uncharacterized protein A4U43_C04F34840 [Asparagu...  1821   0.0  
ref|XP_020093427.1| DNA-directed RNA polymerase I subunit 2 [Ana...  1736   0.0  
ref|XP_008806649.1| PREDICTED: DNA-directed RNA polymerase I sub...  1731   0.0  
ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I sub...  1723   0.0  
ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1719   0.0  
ref|XP_019055826.1| PREDICTED: DNA-directed RNA polymerase I sub...  1604   0.0  
ref|XP_015614312.1| PREDICTED: DNA-directed RNA polymerase I sub...  1595   0.0  
ref|XP_021314715.1| DNA-directed RNA polymerase I subunit 2 isof...  1590   0.0  
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1586   0.0  
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...  1586   0.0  
ref|XP_008664805.1| DNA-directed RNA polymerase I subunit 2 [Zea...  1579   0.0  
gb|PKA48040.1| DNA-directed RNA polymerase II subunit RPB2 [Apos...  1568   0.0  
ref|XP_006661904.2| PREDICTED: DNA-directed RNA polymerase I sub...  1568   0.0  
ref|XP_010067710.1| PREDICTED: DNA-directed RNA polymerase I sub...  1563   0.0  
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub...  1558   0.0  
ref|XP_020150652.1| DNA-directed RNA polymerase I subunit 2 isof...  1551   0.0  
ref|XP_020150651.1| DNA-directed RNA polymerase I subunit 2 isof...  1551   0.0  
gb|PNT67640.1| hypothetical protein BRADI_3g29917v3 [Brachypodiu...  1547   0.0  

>ref|XP_020263709.1| DNA-directed RNA polymerase I subunit 2 isoform X2 [Asparagus
            officinalis]
          Length = 1160

 Score = 1999 bits (5179), Expect = 0.0
 Identities = 991/1154 (85%), Positives = 1056/1154 (91%), Gaps = 8/1154 (0%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            +K++KP+ +++R LFKPHIESFDYFIDKGMELA+ SIRP EI D   NTKLRIYFGEPRL
Sbjct: 4    TKSKKPDYSSLRHLFKPHIESFDYFIDKGMELALTSIRPVEIADG--NTKLRIYFGEPRL 61

Query: 183  LSPRDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCC 362
            L PRDA ++R+IYPQECREARTTY+G+ +VE FFQYNDG SIRHRLSFG LPIMLMSK C
Sbjct: 62   LPPRDASANRNIYPQECREARTTYKGDFSVEVFFQYNDGPSIRHRLSFGQLPIMLMSKRC 121

Query: 363  HLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYS 542
            HLRGADP KLI+HKEEATEMGGYFICNGLERLCRLLILQKRNYPM LVRK F ARGDGYS
Sbjct: 122  HLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRARGDGYS 181

Query: 543  DKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYV 722
            DKAV++RCVREDQS VTVKLYYLQNGSARLGFWI GREFLLPVGIVLKALIDTNDHEIYV
Sbjct: 182  DKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTNDHEIYV 241

Query: 723  SLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFE 902
            SLT CYKERYQREKG VGTQLIGERAQIIL+EVR LSLFTRSDCLKHIG+YFKPAI+GFE
Sbjct: 242  SLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPAIDGFE 301

Query: 903  TENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLL 1082
             E+Y  VADAVLRDY+ VHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLL
Sbjct: 302  AESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLL 361

Query: 1083 PGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESM 1262
            PGHLI++YLKEKVVEWLR+SRR L +EM K+ +F+I DP+QVKKFL +SSV+IGRS+ESM
Sbjct: 362  PGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGRSIESM 421

Query: 1263 LKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPES 1442
            LKVGRLAT +SLDLPQK+G+TIQAERLNYLRFISHF AVHRGA F KMRTTVVRKLMPES
Sbjct: 422  LKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRKLMPES 481

Query: 1443 WGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLL 1622
            WGFLCPVHTPDGEPCGLLNHMTS C +TSYFN EGK+KDFRDIQRSIQNVLIRLGMSPLL
Sbjct: 482  WGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLGMSPLL 541

Query: 1623 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSF 1802
            PKLEHAGPPEVLQVLLDGR+VGSIAC+EVEKAVAHIR LKLSA+S IPDDLEVGYVPLS 
Sbjct: 542  PKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRIPDDLEVGYVPLSL 601

Query: 1803 GGAYPGLYLFTSPSRFIRPVRNISHATDHNIELIGPFEQAFMEIRCADGGDGGRRSFPAT 1982
            GGAYPGLYLFTSPSRF+RPVRNISH TD NIELIGPFEQAFMEIRCADG DGGRRSFPAT
Sbjct: 602  GGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRRSFPAT 661

Query: 1983 HEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTP 2162
            HEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA+RFRTDVKAYHLQTP
Sbjct: 662  HEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAYHLQTP 721

Query: 2163 QSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTE 2342
            QSPIVRT SYNKYC+DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY+TE
Sbjct: 722  QSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTE 781

Query: 2343 SIDLAERQEKSNPLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXX 2522
            SIDLAERQEKS+  K+FARSND+S +S IDSDGLPYIGQMV PKEP YSTYD        
Sbjct: 782  SIDLAERQEKSSK-KVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLTSDVKS 840

Query: 2523 XXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPD 2702
                GSEPVIVDNVTV+GT +KN MQKVNIRTR IRNP+IGDKFSSRHGQKGVCSQLWPD
Sbjct: 841  TLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCSQLWPD 900

Query: 2703 IDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVE--- 2873
            IDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSL G+F DATPFASSV+   
Sbjct: 901  IDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASSVDKKD 960

Query: 2874 ----SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSD 3041
                SERSS VD+LGP+LASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSD
Sbjct: 961  GKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSD 1020

Query: 3042 KFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAE 3221
            KFQVRSTGTVDPITRQPV            EMERDSVLAHGAAYLLHDRLHSCSDYHIAE
Sbjct: 1021 KFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSDYHIAE 1080

Query: 3222 VCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLA 3398
            VCSFCGSLLTATVIQQQKR++ +IPG+PQ +    FTC+ACKT+KGMETVAMPYVFRYLA
Sbjct: 1081 VCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYVFRYLA 1140

Query: 3399 TELAAMNIKMELKL 3440
             ELAAMNI+MELKL
Sbjct: 1141 AELAAMNIRMELKL 1154


>ref|XP_020263708.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Asparagus
            officinalis]
          Length = 1163

 Score = 1995 bits (5169), Expect = 0.0
 Identities = 991/1157 (85%), Positives = 1057/1157 (91%), Gaps = 11/1157 (0%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            +K++KP+ +++R LFKPHIESFDYFIDKGMELA+ SIRP EI D   NTKLRIYFGEPRL
Sbjct: 4    TKSKKPDYSSLRHLFKPHIESFDYFIDKGMELALTSIRPVEIADG--NTKLRIYFGEPRL 61

Query: 183  LSPRDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCC 362
            L PRDA ++R+IYPQECREARTTY+G+ +VE FFQYNDG SIRHRLSFG LPIMLMSK C
Sbjct: 62   LPPRDASANRNIYPQECREARTTYKGDFSVEVFFQYNDGPSIRHRLSFGQLPIMLMSKRC 121

Query: 363  HLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYS 542
            HLRGADP KLI+HKEEATEMGGYFICNGLERLCRLLILQKRNYPM LVRK F ARGDGYS
Sbjct: 122  HLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRARGDGYS 181

Query: 543  DKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYV 722
            DKAV++RCVREDQS VTVKLYYLQNGSARLGFWI GREFLLPVGIVLKALIDTNDHEIYV
Sbjct: 182  DKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTNDHEIYV 241

Query: 723  SLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFE 902
            SLT CYKERYQREKG VGTQLIGERAQIIL+EVR LSLFTRSDCLKHIG+YFKPAI+GFE
Sbjct: 242  SLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPAIDGFE 301

Query: 903  TENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLL 1082
             E+Y  VADAVLRDY+ VHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLL
Sbjct: 302  AESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLL 361

Query: 1083 PGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESM 1262
            PGHLI++YLKEKVVEWLR+SRR L +EM K+ +F+I DP+QVKKFL +SSV+IGRS+ESM
Sbjct: 362  PGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGRSIESM 421

Query: 1263 LKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPES 1442
            LKVGRLAT +SLDLPQK+G+TIQAERLNYLRFISHF AVHRGA F KMRTTVVRKLMPES
Sbjct: 422  LKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRKLMPES 481

Query: 1443 WGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLL 1622
            WGFLCPVHTPDGEPCGLLNHMTS C +TSYFN EGK+KDFRDIQRSIQNVLIRLGMSPLL
Sbjct: 482  WGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLGMSPLL 541

Query: 1623 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATS---VIPDDLEVGYVP 1793
            PKLEHAGPPEVLQVLLDGR+VGSIAC+EVEKAVAHIR LKLSA+S   +IPDDLEVGYVP
Sbjct: 542  PKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRVGLIPDDLEVGYVP 601

Query: 1794 LSFGGAYPGLYLFTSPSRFIRPVRNISHATDHNIELIGPFEQAFMEIRCADGGDGGRRSF 1973
            LS GGAYPGLYLFTSPSRF+RPVRNISH TD NIELIGPFEQAFMEIRCADG DGGRRSF
Sbjct: 602  LSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRRSF 661

Query: 1974 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHL 2153
            PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA+RFRTDVKAYHL
Sbjct: 662  PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAYHL 721

Query: 2154 QTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 2333
            QTPQSPIVRT SYNKYC+DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY
Sbjct: 722  QTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 781

Query: 2334 KTESIDLAERQEKSNPLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXX 2513
            +TESIDLAERQEKS+  K+FARSND+S +S IDSDGLPYIGQMV PKEP YSTYD     
Sbjct: 782  QTESIDLAERQEKSSK-KVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLTSD 840

Query: 2514 XXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQL 2693
                   GSEPVIVDNVTV+GT +KN MQKVNIRTR IRNP+IGDKFSSRHGQKGVCSQL
Sbjct: 841  VKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCSQL 900

Query: 2694 WPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVE 2873
            WPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSL G+F DATPFASSV+
Sbjct: 901  WPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASSVD 960

Query: 2874 -------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM 3032
                   SERSS VD+LGP+LASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM
Sbjct: 961  KKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM 1020

Query: 3033 VSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYH 3212
            VSDKFQVRSTGTVDPITRQPV            EMERDSVLAHGAAYLLHDRLHSCSDYH
Sbjct: 1021 VSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSDYH 1080

Query: 3213 IAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFR 3389
            IAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    FTC+ACKT+KGMETVAMPYVFR
Sbjct: 1081 IAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYVFR 1140

Query: 3390 YLATELAAMNIKMELKL 3440
            YLA ELAAMNI+MELKL
Sbjct: 1141 YLAAELAAMNIRMELKL 1157


>gb|ONK73747.1| uncharacterized protein A4U43_C04F34840 [Asparagus officinalis]
          Length = 1087

 Score = 1821 bits (4717), Expect = 0.0
 Identities = 903/1039 (86%), Positives = 955/1039 (91%), Gaps = 8/1039 (0%)
 Frame = +3

Query: 348  MSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCAR 527
            +SK CHLRGADP KLI+HKEEATEMGGYFICNGLERLCRLLILQKRNYPM LVRK F AR
Sbjct: 44   LSKRCHLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRAR 103

Query: 528  GDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTND 707
            GDGYSDKAV++RCVREDQS VTVKLYYLQNGSARLGFWI GREFLLPVGIVLKALIDTND
Sbjct: 104  GDGYSDKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTND 163

Query: 708  HEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPA 887
            HEIYVSLT CYKERYQREKG VGTQLIGERAQIIL+EVR LSLFTRSDCLKHIG+YFKPA
Sbjct: 164  HEIYVSLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPA 223

Query: 888  IEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN 1067
            I+GFE E+Y  VADAVLRDY+ VHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN
Sbjct: 224  IDGFEAESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN 283

Query: 1068 QEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGR 1247
            QEVLLPGHLI++YLKEKVVEWLR+SRR L +EM K+ +F+I DP+QVKKFL +SSV+IGR
Sbjct: 284  QEVLLPGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGR 343

Query: 1248 SVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRK 1427
            S+ESMLKVGRLAT +SLDLPQK+G+TIQAERLNYLRFISHF AVHRGA F KMRTTVVRK
Sbjct: 344  SIESMLKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRK 403

Query: 1428 LMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLG 1607
            LMPESWGFLCPVHTPDGEPCGLLNHMTS C +TSYFN EGK+KDFRDIQRSIQNVLIRLG
Sbjct: 404  LMPESWGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLG 463

Query: 1608 MSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGY 1787
            MSPLLPKLEHAGPPEVLQVLLDGR+VGSIAC+EVEKAVAHIR LKLSA+S IPDDLEVGY
Sbjct: 464  MSPLLPKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRIPDDLEVGY 523

Query: 1788 VPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDHNIELIGPFEQAFMEIRCADGGDGGRR 1967
            VPLS GGAYPGLYLFTSPSRF+RPVRNISH TD NIELIGPFEQAFMEIRCADG DGGRR
Sbjct: 524  VPLSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRR 583

Query: 1968 SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAY 2147
            SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA+RFRTDVKAY
Sbjct: 584  SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAY 643

Query: 2148 HLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH 2327
            HLQTPQSPIVRT SYNKYC+DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH
Sbjct: 644  HLQTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH 703

Query: 2328 IYKTESIDLAERQEKSNPLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXX 2507
            IY+TESIDLAERQEKS+  K+FARSND+S +S IDSDGLPYIGQMV PKEP YSTYD   
Sbjct: 704  IYQTESIDLAERQEKSSK-KVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLT 762

Query: 2508 XXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCS 2687
                     GSEPVIVDNVTV+GT +KN MQKVNIRTR IRNP+IGDKFSSRHGQKGVCS
Sbjct: 763  SDVKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCS 822

Query: 2688 QLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASS 2867
            QLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSL G+F DATPFASS
Sbjct: 823  QLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASS 882

Query: 2868 VE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR 3026
            V+       SERSS VD+LGP+LASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR
Sbjct: 883  VDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR 942

Query: 3027 HMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSD 3206
            HMVSDKFQVRSTGTVDPITRQPV            EMERDSVLAHGAAYLLHDRLHSCSD
Sbjct: 943  HMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSD 1002

Query: 3207 YHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYV 3383
            YHIAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    FTC+ACKT+KGMETVAMPYV
Sbjct: 1003 YHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYV 1062

Query: 3384 FRYLATELAAMNIKMELKL 3440
            FRYLA ELAAMNI+MELKL
Sbjct: 1063 FRYLAAELAAMNIRMELKL 1081


>ref|XP_020093427.1| DNA-directed RNA polymerase I subunit 2 [Ananas comosus]
          Length = 1168

 Score = 1736 bits (4496), Expect = 0.0
 Identities = 851/1158 (73%), Positives = 994/1158 (85%), Gaps = 12/1158 (1%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            SK + P+ A +RELF+PHI+SFDYF+D+G+E A+ SIRP EI DP+T +KLRI F +P +
Sbjct: 3    SKAKNPDYAALRELFRPHIDSFDYFLDEGLEKALLSIRPAEIADPSTGSKLRISFEKPHV 62

Query: 183  LSP-RDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKC 359
            L P R+   S  ++P ECR+ARTTY+GE  V+  FQY+ GV +R   +FG+LPIML SK 
Sbjct: 63   LPPMREGRLSEPLFPFECRQARTTYKGEFRVDVAFQYDGGVVVRESFNFGHLPIMLKSKL 122

Query: 360  CHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGY 539
            CHLRGADPQKL+FHKEEATEMGGYFICNGLERL RLLI+QK NYPMG+VRKSF ARG GY
Sbjct: 123  CHLRGADPQKLVFHKEEATEMGGYFICNGLERLGRLLIIQKSNYPMGMVRKSFRARGAGY 182

Query: 540  SDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIY 719
            SDKAV++RCVREDQSSV++KLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDT+D EI+
Sbjct: 183  SDKAVVMRCVREDQSSVSLKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTSDREIF 242

Query: 720  VSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGF 899
            VSLT CY ++YQREKGVVGTQLIGERAQIIL+EVR LSL TR  CLKHIG+YF+P ++GF
Sbjct: 243  VSLTCCYNDKYQREKGVVGTQLIGERAQIILDEVRTLSLLTRLQCLKHIGEYFQPVMDGF 302

Query: 900  ETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVL 1079
            E+E+++ VA+AVLRDY+ VHL++NHDKFNLLIF+LQKLYALVDQTAAPDN D LQNQEVL
Sbjct: 303  ESESHETVAEAVLRDYIFVHLSNNHDKFNLLIFILQKLYALVDQTAAPDNPDALQNQEVL 362

Query: 1080 LPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVES 1259
            LPGHL+ +Y+KEK+ +WL KSRR + +E+TK  +F + + + +KK L ++S ++GR+VES
Sbjct: 363  LPGHLVTIYVKEKLQDWLSKSRRLIQEEITKDKSFELKNLNHIKKILNRNSGSVGRAVES 422

Query: 1260 MLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPE 1439
            M+K+GRL T + LDLPQ++GMTIQAERLNY RFI+HFR+VHRGA F KMRTT VRKL+PE
Sbjct: 423  MIKLGRLNTASGLDLPQREGMTIQAERLNYCRFIAHFRSVHRGASFAKMRTTSVRKLLPE 482

Query: 1440 SWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPL 1619
            SWGFLCPVHTPDGEPCGLLNHMTS C V S+++++GKIKDF  I+ SI  VL+ +GM+PL
Sbjct: 483  SWGFLCPVHTPDGEPCGLLNHMTSTCCVASFYSSDGKIKDFLKIRMSILTVLVGIGMTPL 542

Query: 1620 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLS 1799
             PKLE AGPPEVL VLLDG VVGSIA  +VEKAVAH+R LKL A S IP+DLEVGYVPLS
Sbjct: 543  TPKLERAGPPEVLHVLLDGCVVGSIASGKVEKAVAHLRSLKLFAVSGIPEDLEVGYVPLS 602

Query: 1800 FGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-S 1970
             GGAYPGLYL+++P+RFIRPVRN+SH+++   +IELIGPFEQAFMEIRC DGGDGGR+ S
Sbjct: 603  LGGAYPGLYLYSNPARFIRPVRNLSHSSNGSQSIELIGPFEQAFMEIRCPDGGDGGRKES 662

Query: 1971 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYH 2150
            FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAL+FR DVK+YH
Sbjct: 663  FPATHEEIHPTSILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALKFRADVKSYH 722

Query: 2151 LQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 2330
            LQTPQ+PIVRT +Y+KYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+RG+CRGHI
Sbjct: 723  LQTPQTPIVRTRTYSKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVERGMCRGHI 782

Query: 2331 YKTESIDLAERQEKSN-PLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXX 2507
            Y+TE+IDLA++ ++ +  L+IFARSNDR   S IDSDGLPYIG+ ++P EP+YSTY+   
Sbjct: 783  YQTETIDLAKKLDRGDRVLEIFARSNDRKMKSSIDSDGLPYIGETIHPNEPWYSTYNTLT 842

Query: 2508 XXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCS 2687
                     GSEPVI+D V V GT +KNYMQKVNIRTR  RNP+IGDKFSSRHGQKGVCS
Sbjct: 843  SVTKPTTLKGSEPVIIDYVAVDGTSSKNYMQKVNIRTRRTRNPIIGDKFSSRHGQKGVCS 902

Query: 2688 QLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASS 2867
            QLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F DATPFA+S
Sbjct: 903  QLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFIDATPFATS 962

Query: 2868 VESERS------SQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRH 3029
             ++ +       S VD+LGP+LASHGFNYHG EVLYSG +GTE+TCEIFIGPVYYQRLRH
Sbjct: 963  KDANQDNPSKPYSVVDELGPLLASHGFNYHGVEVLYSGVFGTELTCEIFIGPVYYQRLRH 1022

Query: 3030 MVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDY 3209
            MVSDKFQVRSTGTVD ITRQP+            EMERD++LAHGAAYLLHDRLHSCSDY
Sbjct: 1023 MVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHSCSDY 1082

Query: 3210 HIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVF 3386
            HIA+VCS CGS+LTAT IQ QKR + +I G+P A+   +FTC+AC+T KGMETVAMPYVF
Sbjct: 1083 HIADVCSNCGSVLTATTIQPQKRAVREILGLPPARAPKSFTCHACETSKGMETVAMPYVF 1142

Query: 3387 RYLATELAAMNIKMELKL 3440
            +YLA ELAAMNIKMEL+L
Sbjct: 1143 KYLAAELAAMNIKMELRL 1160


>ref|XP_008806649.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Phoenix
            dactylifera]
          Length = 1177

 Score = 1731 bits (4482), Expect = 0.0
 Identities = 858/1167 (73%), Positives = 985/1167 (84%), Gaps = 21/1167 (1%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            SK  KP+   +RELF+PHI+SF+YFID+G+E A+ SIRP E+ DP+T  KLRIYF  P++
Sbjct: 3    SKATKPDYEALRELFRPHIDSFNYFIDEGLEKALLSIRPVEVSDPSTGGKLRIYFENPQV 62

Query: 183  LSP--------RDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLP 338
              P             + ++YP ECR+ARTTY+GE  V    QYN+   ++  +SFG+LP
Sbjct: 63   FHPVREGRITTTKGRITEALYPHECRQARTTYKGEFKVTICLQYNERQPVQTPMSFGHLP 122

Query: 339  IMLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSF 518
            IML S+ CHL+ ADPQKLIFHKEEATEMGGYFICNGLERL RLLI+ KRNYPMG++R SF
Sbjct: 123  IMLRSRLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSF 182

Query: 519  CARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALID 698
             +RG GYSDKAV++RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALID
Sbjct: 183  RSRGVGYSDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALID 242

Query: 699  TNDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYF 878
            T+D EI+VSLT CY +RYQ+++G VG+Q+IGERAQIILEEVR LSL T S CLKHIG+YF
Sbjct: 243  TSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYF 302

Query: 879  KPAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDV 1058
            +P ++GFE E +  VA+AVLRDYV VHLT NHDKFNLLIFMLQKLYALVDQT APDN D 
Sbjct: 303  RPVMDGFENEFHTTVAEAVLRDYVFVHLTRNHDKFNLLIFMLQKLYALVDQTVAPDNSDA 362

Query: 1059 LQNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMT-KANNFNIIDPDQVKKFLGKSSV 1235
            LQNQE+LLPGHLI +Y+KEKV +WL KSRRQLLDE+  K  N  I    QV KFL +++ 
Sbjct: 363  LQNQEILLPGHLITIYVKEKVQDWLNKSRRQLLDELAKKEKNLQISMVHQVAKFLNRNAA 422

Query: 1236 TIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTT 1415
            ++GRSVESM+K+GRL T +SLDLPQ++GMTIQAERLN+ RF+SHFR+VHRGA F KMR T
Sbjct: 423  SVGRSVESMIKLGRLTTSSSLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFAKMRIT 482

Query: 1416 VVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVL 1595
             VRKL+PESWGFLCPVHTPDGEPCGLLNHMTS C ++S++++EGK+KDF  I+ SI  VL
Sbjct: 483  SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCCISSFYDSEGKVKDFLKIRMSIMTVL 542

Query: 1596 IRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDL 1775
            + +GM+PLLPKLE AGPP VL VLLDG VVGSIA S+VEKAVAHIR LKLS+ S +P+DL
Sbjct: 543  VGVGMTPLLPKLERAGPPVVLHVLLDGCVVGSIASSKVEKAVAHIRSLKLSSLSGVPNDL 602

Query: 1776 EVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDH--NIELIGPFEQAFMEIRCADG 1949
            EVGYVPLS GG YPGLYLFTSPSRFIRPVRNISH++D   NIELIGPFEQAFMEIRCADG
Sbjct: 603  EVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISHSSDSNLNIELIGPFEQAFMEIRCADG 662

Query: 1950 GDGGRR-SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRF 2126
            GDGGRR SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QAL+F
Sbjct: 663  GDGGRRESFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQF 722

Query: 2127 RTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVD 2306
            R DVK+YHLQTPQSPIVRT SY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVD
Sbjct: 723  RADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVD 782

Query: 2307 RGLCRGHIYKTESIDLAERQEKSN-PLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPY 2483
            RGLCRGHIY+TESIDL +  ++ +  L+IFARS++++  S IDSDGLPYIGQ+++P EP 
Sbjct: 783  RGLCRGHIYQTESIDLTKNHDREDRVLEIFARSSEKTMKSSIDSDGLPYIGQVIHPNEPL 842

Query: 2484 YSTYDXXXXXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSR 2663
            YS+Y+            GSEPVI+D VTV GT +KNYMQKVNIRTR  R P+IGDKFSSR
Sbjct: 843  YSSYNTLTSVTKPTRLKGSEPVIIDYVTVDGTTSKNYMQKVNIRTRRTRYPIIGDKFSSR 902

Query: 2664 HGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFK 2843
            HGQKGVCSQLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F 
Sbjct: 903  HGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFV 962

Query: 2844 DATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIG 3002
            DATPF +SV        S+ S+ VD+LGP+LAS+GFNYHG EVLYSG +GTE+TCEIFIG
Sbjct: 963  DATPFQNSVSEKDEDRPSKSSTLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFIG 1022

Query: 3003 PVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLH 3182
            PVYYQRLRHMVSDKFQVRSTGTVD ITRQP+            EMERDSVLAHGAAYLLH
Sbjct: 1023 PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLLH 1082

Query: 3183 DRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGM 3359
            DRLHSCSDYHIAEVCSFCGS+LTA+VIQ QKR + +I G+P A+   ++TC+ACKT KGM
Sbjct: 1083 DRLHSCSDYHIAEVCSFCGSVLTASVIQPQKRAVREIHGLPPARTPKSYTCHACKTSKGM 1142

Query: 3360 ETVAMPYVFRYLATELAAMNIKMELKL 3440
            ETVAMPYVF+YLA E+AAMNIKMEL+L
Sbjct: 1143 ETVAMPYVFKYLAAEMAAMNIKMELQL 1169


>ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Elaeis
            guineensis]
          Length = 1175

 Score = 1723 bits (4463), Expect = 0.0
 Identities = 859/1169 (73%), Positives = 989/1169 (84%), Gaps = 23/1169 (1%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            SK  K +   +RELF+PHI+SF+YF+D+G+E A+ SIRP EI DP+   KLRIYF  P++
Sbjct: 3    SKATKQDYEALRELFRPHIDSFNYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENPQV 62

Query: 183  LSP-RDAMSSRS-------IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLP 338
              P R+   ++S       +YP ECR+A TTY+GE  V    QYND   ++  ++FG+LP
Sbjct: 63   FHPLREGRITKSKGGITEALYPHECRQAGTTYKGEFKVTICLQYNDQQPVQIPMNFGHLP 122

Query: 339  IMLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSF 518
            IML SK CHL+ ADPQKLIFHKEEATEMGGYFICNGLERL RLLI+ KRNYPMG++R SF
Sbjct: 123  IMLRSKLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSF 182

Query: 519  CARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALID 698
             +RG GYSDKAV++RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLP+GIVLKALID
Sbjct: 183  RSRGVGYSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLKALID 242

Query: 699  TNDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYF 878
            T+D EI+VSLT CY +RYQ+++G VG+Q+IGERAQIILEEVR LSL T S CLKHIG+YF
Sbjct: 243  TSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYF 302

Query: 879  KPAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDV 1058
            +PA++GFE E++  VA+AVLRDYV VHLT+NHDKFNLLIFMLQKLYALVDQT APDN D 
Sbjct: 303  RPAMDGFENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNPDA 362

Query: 1059 LQNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKAN---NFNIIDPDQVKKFLGKS 1229
            LQNQE+LLPGHLI +Y+KEK  +WL KSRRQLLDE+ K     +F+I+   QV KFL ++
Sbjct: 363  LQNQEILLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIV--HQVVKFLNRN 420

Query: 1230 SVTIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMR 1409
            + ++GRS+ESM+KVGRLAT + LDLPQ++GMTIQAERLN+ RF+SHFR+VHRGA FTKMR
Sbjct: 421  AASLGRSIESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKMR 480

Query: 1410 TTVVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQN 1589
             T VRKL+PESWGFLCPVHTPDGEPCGLLNHMTS C ++S++++E K+KDF  I+ SI  
Sbjct: 481  ITSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSILT 540

Query: 1590 VLIRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPD 1769
            VL+ +GM+PLLPKLE AGPPEVL VLLDG VVGSIA SEVEKAVAHIR LKLS+ S IPD
Sbjct: 541  VLVGVGMTPLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIPD 600

Query: 1770 DLEVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDH--NIELIGPFEQAFMEIRCA 1943
            DLEVGYVPLS GG YPGLYLFTSPSRFIRPVRN+SH++D+  NIELIGPFEQAFMEIRCA
Sbjct: 601  DLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFMEIRCA 660

Query: 1944 DGGDGGRR-SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAL 2120
            DGG GGRR SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QAL
Sbjct: 661  DGGHGGRRQSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQAL 720

Query: 2121 RFRTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSS 2300
            +FR DVK+YHLQTPQSPIVRT SY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSS
Sbjct: 721  QFRADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSS 780

Query: 2301 VDRGLCRGHIYKTESIDLAERQEKSNP-LKIFARSNDRSTNSLIDSDGLPYIGQMVNPKE 2477
            VDRGLCRGHIY+TESIDL +  ++ +  L+IFARS+D++  S ID+DGLPYIGQ+++P E
Sbjct: 781  VDRGLCRGHIYQTESIDLTKNHDREDQVLEIFARSSDKTMKSSIDTDGLPYIGQVIHPNE 840

Query: 2478 PYYSTYDXXXXXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFS 2657
            P YS+Y+            GSEPVIVD V+V G  +KNYMQKVNIRTR  R P+IGDKFS
Sbjct: 841  PLYSSYNTLTSVTKPTLLKGSEPVIVDYVSVDGATSKNYMQKVNIRTRRTRYPIIGDKFS 900

Query: 2658 SRHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGE 2837
            SRHGQKGVCSQLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+
Sbjct: 901  SRHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGK 960

Query: 2838 FKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIF 2996
            F DATPF +SV        S+ SS VD+LGP+LAS+GFNYHG EVLYSG +GTE+TCEIF
Sbjct: 961  FVDATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIF 1020

Query: 2997 IGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYL 3176
            IGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+            EMERDSVLAHGAAYL
Sbjct: 1021 IGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYL 1080

Query: 3177 LHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRK 3353
            LHDRLHSCSDYHIAEVCSFCG +LTA+VIQ QKR + +I G+P A+   ++TC+ACKT K
Sbjct: 1081 LHDRLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKSYTCHACKTSK 1140

Query: 3354 GMETVAMPYVFRYLATELAAMNIKMELKL 3440
            GMETVAMPYVF+YLA ELAAMNIKMEL+L
Sbjct: 1141 GMETVAMPYVFKYLAAELAAMNIKMELRL 1169


>ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1169

 Score = 1719 bits (4452), Expect = 0.0
 Identities = 850/1162 (73%), Positives = 978/1162 (84%), Gaps = 14/1162 (1%)
 Frame = +3

Query: 9    TEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLS 188
            T K +   ++ELF+PHIESFDYF+D+G+E A  SIRP EI DP T  KLR+   +P+LL 
Sbjct: 4    TSKSDFQALQELFRPHIESFDYFLDEGLEKAFLSIRPIEISDPHTGIKLRVSLEKPQLLP 63

Query: 189  P-RDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCH 365
            P RD   S  ++P ECR+AR +Y+GE      FQY++GV +R  ++FG+LPIML SK CH
Sbjct: 64   PMRDGRLSEPLFPHECRQARISYKGEFRALVCFQYDEGVVVRENINFGHLPIMLKSKLCH 123

Query: 366  LRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSD 545
            LRGADPQKL+ HKEEATEMGGYFICNGLERL RLLI+QK+NYPM +VRKSF  RG GY D
Sbjct: 124  LRGADPQKLVAHKEEATEMGGYFICNGLERLVRLLIIQKQNYPMSMVRKSFRNRGPGYGD 183

Query: 546  KAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVS 725
            KAV++RCVREDQSSVT+KLYYL+NGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI+VS
Sbjct: 184  KAVVMRCVREDQSSVTLKLYYLENGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIFVS 243

Query: 726  LTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFET 905
            LT CY +RYQREKG V TQLIGERAQIIL+EVR LSL+TRS CLKHIG+YF+PA+ GFET
Sbjct: 244  LTCCYNDRYQREKGAVATQLIGERAQIILDEVRDLSLWTRSQCLKHIGEYFRPAMNGFET 303

Query: 906  ENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 1085
            E++  VA+AVLRDY+ VHL SNHDKFNLLIF+LQKLYALVDQTAAPDN D LQNQE+LLP
Sbjct: 304  ESHTTVAEAVLRDYIFVHLASNHDKFNLLIFLLQKLYALVDQTAAPDNPDALQNQEILLP 363

Query: 1086 GHLIALYLKEKVVEWLRKSRRQLLDEMT-KANNFNIIDPDQVKKFLGKSSVTIGRSVESM 1262
            GHLI +YLKE++ +WL+KS+RQLLDE   K  N +I +  QVKKF  +SS TIGR++ESM
Sbjct: 364  GHLITIYLKERLQDWLKKSKRQLLDETAKKEKNIDIKNLTQVKKFFSRSSATIGRAIESM 423

Query: 1263 LKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPES 1442
            LK+GRL T + LDLPQ++GM+IQAERLN+ R++SHFR+VHRGA F KMRTT VRKL+PES
Sbjct: 424  LKIGRLNTASGLDLPQREGMSIQAERLNFFRYLSHFRSVHRGASFAKMRTTSVRKLLPES 483

Query: 1443 WGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLL 1622
            WGFLCPV+TPDGEPCGLLNHMT AC V S++++EG++KDF  I+ SI +VL+ +GM+PLL
Sbjct: 484  WGFLCPVNTPDGEPCGLLNHMTCACRVASFYDSEGRVKDFLKIRMSILSVLVGIGMTPLL 543

Query: 1623 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSF 1802
            PKLE AGPPEVL VLLDG VVGSI+  ++E+AVAHIRRLKLS    IP+DLEVGYVPLSF
Sbjct: 544  PKLERAGPPEVLHVLLDGCVVGSISSVKIEEAVAHIRRLKLSGICGIPEDLEVGYVPLSF 603

Query: 1803 GGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRRS-F 1973
            GGAYPGLY+FT+ SRFIRPV N+   TD   NIELIGPFEQAFMEIRC DGG+GGRR  F
Sbjct: 604  GGAYPGLYMFTNSSRFIRPVINLIQVTDGSKNIELIGPFEQAFMEIRCPDGGNGGRREFF 663

Query: 1974 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHL 2153
            PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QAL++R D+K+YHL
Sbjct: 664  PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQYRADLKSYHL 723

Query: 2154 QTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 2333
            QTPQSPIVRT SY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVDRGLCRGHIY
Sbjct: 724  QTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCRGHIY 783

Query: 2334 KTESIDLAERQEKSNP-LKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXX 2510
            +TESIDLA + EK +  L+IFARSNDR   S IDSDGLPY+GQ ++P EP YSTY+    
Sbjct: 784  QTESIDLANKHEKEDRLLEIFARSNDRKLKSSIDSDGLPYVGQTIHPSEPLYSTYNTLTS 843

Query: 2511 XXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQ 2690
                    GSE VI+D V V GTG+KNY+QKVNIRTR  R P+IGDKFSSRHGQKGVCSQ
Sbjct: 844  ITKPTLLKGSEDVIIDYVAVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQ 903

Query: 2691 LWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSV 2870
            +WPD+DMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F DATPF+ SV
Sbjct: 904  MWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFSRSV 963

Query: 2871 -------ESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRH 3029
                    S+ SS VD+LGP+L S+GFNYHG EVLYSG YGTE+TCEIFIGPVYYQRLRH
Sbjct: 964  CNADEDKPSKSSSVVDELGPMLTSYGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRH 1023

Query: 3030 MVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDY 3209
            MVSDKFQVRSTGTVD ITRQP+            EMERD+VLAHGAAYLLHDRLHSCSDY
Sbjct: 1024 MVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAVLAHGAAYLLHDRLHSCSDY 1083

Query: 3210 HIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVF 3386
            HIA+VCS+CGS+LTAT IQ QKR + +I G+P A+    + C +CKT KGMETVAMPYVF
Sbjct: 1084 HIADVCSYCGSVLTATAIQPQKRAVREIHGLPPARTPKNYICQSCKTGKGMETVAMPYVF 1143

Query: 3387 RYLATELAAMNIKMELKLK*QS 3452
            +YLA ELAAMNIKMEL+L  Q+
Sbjct: 1144 KYLAAELAAMNIKMELQLSNQA 1165


>ref|XP_019055826.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Nelumbo nucifera]
          Length = 1173

 Score = 1604 bits (4153), Expect = 0.0
 Identities = 811/1164 (69%), Positives = 944/1164 (81%), Gaps = 19/1164 (1%)
 Frame = +3

Query: 6    KTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLL 185
            K  K +  ++RELFKPHI+SFDYF+D G+E  +  I+P EIVD  T TKLRI+FG+  L 
Sbjct: 5    KDTKHDYESLRELFKPHIDSFDYFVDAGLETMLMHIKPVEIVDSFTKTKLRIWFGKSELY 64

Query: 186  SPRDAMSSRSI----YPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMS 353
             P+    S+SI     P ECR+A  +Y G+  V+  FQYN+GV +R +  FG LPIML S
Sbjct: 65   PPQKERISKSIRDPLLPFECRQAGISYSGKFMVDVCFQYNNGVVVREKFGFGQLPIMLKS 124

Query: 354  KCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGD 533
            K CHLRGADPQKL+ +KEEATEMGGYFI NGLERL RLLI+ KRNYPM +VR SF  R +
Sbjct: 125  KVCHLRGADPQKLVSYKEEATEMGGYFILNGLERLVRLLIMPKRNYPMSMVRNSFRERRE 184

Query: 534  GYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHE 713
            GY+DKAV++RCVREDQS+VTVKLY+LQNGSARLGFWIRG+E+LLPVGIVLKALIDT+DHE
Sbjct: 185  GYTDKAVVIRCVREDQSAVTVKLYHLQNGSARLGFWIRGKEYLLPVGIVLKALIDTSDHE 244

Query: 714  IYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIE 893
            IYVSLT C+ E  Q+ KG VGTQL+GER +IIL+EVR LSLFT   C++HIG+YF+  ++
Sbjct: 245  IYVSLT-CHSEVNQKAKGTVGTQLVGERVKIILDEVRDLSLFTHLQCIQHIGEYFQAIMD 303

Query: 894  GFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 1073
            G ETE++ VV + VL+DY+ VHL +NHDKFNLLIFMLQKL++LVDQT  PDN D LQNQE
Sbjct: 304  GLETESHSVVGEVVLKDYIFVHLDNNHDKFNLLIFMLQKLFSLVDQTTVPDNPDTLQNQE 363

Query: 1074 VLLPGHLIALYLKEKVVEWLRKSRRQLLDEM-TKANNFNIIDPDQVKKFLGKSSV-TIGR 1247
            VLLPGHLI +YLKEK+ +WL K RR L DE+  K  +   +    VKK L K+S  +IG 
Sbjct: 364  VLLPGHLITIYLKEKLQDWLLKGRRLLYDEIKNKGKSSEFLSLAHVKKVLDKNSPKSIGL 423

Query: 1248 SVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRK 1427
            ++E+MLK GRL T   LDL QK+GM++QAERLN+LRF+SHFRAVHRGA F  +RTT VRK
Sbjct: 424  ALENMLKTGRLVTQTGLDLQQKEGMSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRK 483

Query: 1428 LMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLG 1607
            L+PE+WGFLCPVHTPDGEPCGLLNH+TS C +TSYF++ G +KDF  I+ SI +VLI +G
Sbjct: 484  LLPETWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSHGNVKDFFKIRMSILSVLIGVG 543

Query: 1608 MSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGY 1787
            M P LPKL  AGPPEVL VLLDGRVVGSI+ +EVE AVAH+RRLKLSA S IP+DLEVGY
Sbjct: 544  MMPSLPKLVRAGPPEVLSVLLDGRVVGSISSTEVENAVAHLRRLKLSACSGIPNDLEVGY 603

Query: 1788 VPLSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGG 1961
            VPL+ GGAYPGLYLFTSPSRF RPVRNIS +++   +IELIGPFEQ +MEIRCADGG+GG
Sbjct: 604  VPLTMGGAYPGLYLFTSPSRFARPVRNISVSSEEGQDIELIGPFEQVYMEIRCADGGNGG 663

Query: 1962 RRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDV 2138
            RRS FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ++RFR D 
Sbjct: 664  RRSIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQSIRFRADQ 723

Query: 2139 KAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC 2318
            K YHLQTPQ+PIVRT++Y KY IDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+RGLC
Sbjct: 724  KLYHLQTPQTPIVRTSAYTKYSIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVERGLC 783

Query: 2319 RGHIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYST 2492
             G+IY+TE+IDLA++  KS+  LK+FARSN D+ST+SLIDSDGLPY+GQ V+P EPY S 
Sbjct: 784  HGYIYQTETIDLADQSGKSDEDLKLFARSNVDKSTHSLIDSDGLPYVGQKVHPDEPYCSI 843

Query: 2493 YDXXXXXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQ 2672
            Y+            GSEPVIVD V V     K  MQKVNIR R  RNP+IGDKFSSRHGQ
Sbjct: 844  YNTVTGTTKATKLKGSEPVIVDYVAVDVRKPKKPMQKVNIRFRRPRNPIIGDKFSSRHGQ 903

Query: 2673 KGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDAT 2852
            KGVCSQLWPDIDMPFS +TGM+PDLIINPHAFPSRMTIGMLLESIAAK GSL G+F +AT
Sbjct: 904  KGVCSQLWPDIDMPFSGVTGMQPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFINAT 963

Query: 2853 PFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVY 3011
            PFASSVE       S+ SS VD+LG +L S+GFNYHG EVLYSG  GTE+TCEIFIGPVY
Sbjct: 964  PFASSVEEDDKKSSSKSSSLVDELGSMLTSYGFNYHGVEVLYSGVLGTELTCEIFIGPVY 1023

Query: 3012 YQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRL 3191
            YQRLRHMVSDKFQVRSTGT+D +TRQP+            EMERDS+LAHGAAYLLHDRL
Sbjct: 1024 YQRLRHMVSDKFQVRSTGTLDQVTRQPIKGRKRGGGIRFGEMERDSILAHGAAYLLHDRL 1083

Query: 3192 HSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETV 3368
            H+CSDYHIA+VCS CGS+LT + IQ QKR + +  G+P  ++    TC+ACKT KGMETV
Sbjct: 1084 HTCSDYHIADVCSLCGSILTTSFIQPQKRAVREFGGLPPGRIPKKVTCHACKTSKGMETV 1143

Query: 3369 AMPYVFRYLATELAAMNIKMELKL 3440
            AMPYVFRYLA ELAAMNIK+ L+L
Sbjct: 1144 AMPYVFRYLAAELAAMNIKLTLQL 1167


>ref|XP_015614312.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Oryza
            sativa Japonica Group]
          Length = 1174

 Score = 1595 bits (4131), Expect = 0.0
 Identities = 779/1154 (67%), Positives = 941/1154 (81%), Gaps = 8/1154 (0%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            S +++   A +REL++PHI+SFDYFID+G++  + SIRP EI  P + T LRI   +  L
Sbjct: 8    SASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRISLEKGHL 67

Query: 183  LSP-RDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKC 359
              P RD      +YPQ+CR+ARTTY GE  V+TF Q NDG ++R   +FGYLPIMLMSK 
Sbjct: 68   FPPKRDGRLDAPLYPQQCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLPIMLMSKL 127

Query: 360  CHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGY 539
            CHLRGAD +KLIFH EEATEMGGYFIC G+ERL R+LILQKRNYPMGL+R SF  RG GY
Sbjct: 128  CHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSFVNRGAGY 187

Query: 540  SDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIY 719
            +DKAVI+RCV++DQSSVT+KLYYL NGSARLGFW+ GREFLLPVGIVLKALIDT+D EI+
Sbjct: 188  TDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIF 247

Query: 720  VSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGF 899
             SLT CY + Y+R KGVV TQLIGERAQIIL+EVR LSLFTR++CL H+G YF+  +EGF
Sbjct: 248  TSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGF 307

Query: 900  ETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVL 1079
            E ++++ VA+AVL+DY+ VHL +NHDKFNLLIFMLQKLYA+VDQTA+PD  D LQ QEVL
Sbjct: 308  EKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADALQYQEVL 367

Query: 1080 LPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVES 1259
            LPGHLI ++LK+++ +WLRKS+R +++E TK  +F++ D  +V+KFL K+S  +G++++S
Sbjct: 368  LPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAYVGKAIQS 427

Query: 1260 MLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPE 1439
            M+KVG++ + + LDLPQ+DGMTI AERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PE
Sbjct: 428  MIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPE 487

Query: 1440 SWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPL 1619
            SWGFLCPVHTPDGEPCGLLNHMTS C ++S++N+EG  KDF+ I+ S+   L+  GM+ L
Sbjct: 488  SWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMAQL 547

Query: 1620 LPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLS 1799
            LP++E  GPPEVL V +DG +VGSIA +++E+ V H+R LKL   S IP+DLEVGYVPLS
Sbjct: 548  LPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLEVGYVPLS 607

Query: 1800 FGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGR-RS 1970
             GGAYPGLYLFT+P+RF+RPVR++   ++   NIELIGPFEQAFMEIRC DGGDGGR + 
Sbjct: 608  HGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRNKL 667

Query: 1971 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYH 2150
            FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+H
Sbjct: 668  FPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFH 727

Query: 2151 LQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHI 2330
            LQTPQ+PIVRT +Y+KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RGHI
Sbjct: 728  LQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHI 787

Query: 2331 YKTESIDLAERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXX 2507
            ++TE IDL+ +  + N  + F +SN  R T + I+SDGLP IG+ + P E YYS  +   
Sbjct: 788  FQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLT 846

Query: 2508 XXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCS 2687
                     GSEP  +D V V GT  K+ +QK NIR R +RNP+IGDKFSSRHGQKGVCS
Sbjct: 847  GTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCS 906

Query: 2688 QLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASS 2867
            QLWPDIDMPFSA TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSL G+F DATPFASS
Sbjct: 907  QLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS 966

Query: 2868 VESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKF 3047
            V+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM CEIF+GPVYYQRLRHMVSDKF
Sbjct: 967  VKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKF 1026

Query: 3048 QVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVC 3227
            QVR+TG +D ITRQP+            EMERD++LAHGA+YLLHDRLHSCSDYHIA+VC
Sbjct: 1027 QVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVC 1086

Query: 3228 SFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLA 3398
            S CGSLLTATVI+   Q+K   D+ G+P  K    F C ACKT KGMETVAMPYVFRYLA
Sbjct: 1087 SICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLA 1146

Query: 3399 TELAAMNIKMELKL 3440
            +ELAAMNIK+EL+L
Sbjct: 1147 SELAAMNIKLELRL 1160


>ref|XP_021314715.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Sorghum bicolor]
 gb|EES04393.2| hypothetical protein SORBI_3004G019200 [Sorghum bicolor]
          Length = 1169

 Score = 1590 bits (4116), Expect = 0.0
 Identities = 776/1156 (67%), Positives = 946/1156 (81%), Gaps = 14/1156 (1%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RDAM 203
            + +RELF+PH+ESFDYF+DKG++  I SIRP  I DP +N  L+I   +  +LSP RDA 
Sbjct: 7    SALRELFRPHVESFDYFLDKGLDEMIQSIRPMVIRDPNSNNTLKIILEKGHVLSPMRDAR 66

Query: 204  SS-RSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGAD 380
            S    +YPQECR+AR TY GE  V+  FQYN+G  IRH  +FG+LPIMLMSK CHLRGAD
Sbjct: 67   SGVLPLYPQECRQARITYHGEFKVDVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRGAD 126

Query: 381  PQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIV 560
            P KL+FH EEATEMGGYFIC G+ERL R+LILQKRNYPMGLVR SF  RG GY+DKAV++
Sbjct: 127  PHKLVFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLVRSSFLKRGAGYTDKAVVI 186

Query: 561  RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCY 740
            RCV+ DQSSV++KLYYLQNGSARLGFW+ GREFLLPVGIVLKALID +D EI+ SLT C+
Sbjct: 187  RCVQRDQSSVSMKLYYLQNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLTCCF 246

Query: 741  KERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKV 920
             +++ + KGVV TQLIGERAQI+L+EVR LSL TR+ CL HIG YF+  +EGFE ++Y+ 
Sbjct: 247  SDKHGKGKGVVSTQLIGERAQIVLDEVRNLSLLTRTQCLVHIGQYFRSVMEGFEKDDYET 306

Query: 921  VADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIA 1100
            VA+AVL+DY+ VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHLI 
Sbjct: 307  VAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNADALQYQEALLPGHLIT 366

Query: 1101 LYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRL 1280
            ++LK+++ +WLRKS+R +++E+ K   F++ +  +++KF+ K + ++ R++ESM+KVG++
Sbjct: 367  IFLKDRLQDWLRKSKRLIIEEVAKNKGFDLGNALEIRKFVTKYTSSVSRAIESMIKVGKV 426

Query: 1281 ATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCP 1460
               + LDLPQ+DGMTIQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCP
Sbjct: 427  NAQSGLDLPQRDGMTIQAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLCP 486

Query: 1461 VHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHA 1640
            VHTPDGEPCGLLNHMTS C ++S++N+EG +K+F ++++ +   L+R+GM+P+LPK+E  
Sbjct: 487  VHTPDGEPCGLLNHMTSTCRISSFYNSEGVVKNFGEMKKLLSAELVRVGMNPVLPKIERT 546

Query: 1641 GPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPG 1820
            GPPEVL V LDGR++G+IA + +EKAV ++R LKL A S IP+DLEVGYVPLSF GA+PG
Sbjct: 547  GPPEVLHVHLDGRILGTIASATIEKAVNYLRTLKLLAHSGIPEDLEVGYVPLSFSGAFPG 606

Query: 1821 LYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHEE 1991
            LYLFT+P+RF+RPVRN+   +D   +IELIGPFEQAFMEIRC DGGDGGR+  FPATHEE
Sbjct: 607  LYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEQFPATHEE 666

Query: 1992 IHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSP 2171
            IHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQ+P
Sbjct: 667  IHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTP 726

Query: 2172 IVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESID 2351
            IVRT +YNKY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RGHIY+TE ID
Sbjct: 727  IVRTGTYNKYNMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECID 786

Query: 2352 LAERQEKSNPLKIFARS-NDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXX 2528
            L+ +   + P + FA+S   R T+S IDSDGLP +GQ V+P E YYS ++          
Sbjct: 787  LSTKSRDNVP-ETFAKSVLSRDTSSAIDSDGLPRLGQTVHPNEQYYSVHNSLTGVIRPVR 845

Query: 2529 XXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDID 2708
              G+EP  +D V V G G+K+ +QK NIR R +RNP+IGDKFSSRHGQKGVCSQLWPDID
Sbjct: 846  LKGTEPAFIDYVAVNGAGSKHGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDID 905

Query: 2709 MPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVESER-- 2882
            MPFSA TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSL G+F DATPFA+SV+ ++  
Sbjct: 906  MPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANSVKQDKDP 965

Query: 2883 ---SSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 3053
               +S VD+LGP+LAS+GFNYHG EVLYSG +GTEM CEIFIGPVYYQRLRHMVSDKFQV
Sbjct: 966  RKPNSIVDELGPMLASYGFNYHGKEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQV 1025

Query: 3054 RSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 3233
            R+TG +D ITRQP+            EMERD++LAHG++YLLHDRLHSCSDYHIA+VCS 
Sbjct: 1026 RTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSL 1085

Query: 3234 CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 3404
            CGSLLTAT+I+   Q+K   ++ G+P  +    F C ACKT KGMETVAMPYVFRYLA E
Sbjct: 1086 CGSLLTATMIESNNQKKAKHEMLGLPTVRPPKNFACQACKTSKGMETVAMPYVFRYLAAE 1145

Query: 3405 LAAMNIKMELKLK*QS 3452
            LAAMNIK+EL+L  +S
Sbjct: 1146 LAAMNIKLELRLSNKS 1161


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Vitis
            vinifera]
 ref|XP_010659084.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Vitis
            vinifera]
          Length = 1169

 Score = 1586 bits (4107), Expect = 0.0
 Identities = 789/1162 (67%), Positives = 935/1162 (80%), Gaps = 18/1162 (1%)
 Frame = +3

Query: 9    TEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLS 188
            T  P+   +RELF+ HI+SFD+ ++ G+E  + S++P E+VD  T  KLRI+FG+P L  
Sbjct: 3    TAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYP 62

Query: 189  PRDAMSSRS----IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSK 356
            P+   S+R+    +YP ECR+A+ +Y G+L  +  FQY +GV+IR + + G  PIML SK
Sbjct: 63   PQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSK 122

Query: 357  CCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDG 536
             CHLRGADPQKL+  KEE++EMGGYFI NGLER+ RLLIL KRNYPM +VR SF  R +G
Sbjct: 123  LCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREG 182

Query: 537  YSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI 716
            Y+DKAV++RCVREDQS+VTVKLYYL+NGSARLGFWI+GRE+LLPVG+VLKALIDT DHEI
Sbjct: 183  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 242

Query: 717  YVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEG 896
            Y SLT CY E+Y+  KG VGTQL+GER +IIL+EVR LSLFTR  CL+HIG++F+  ++G
Sbjct: 243  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 302

Query: 897  FETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEV 1076
             E E+Y +VADAVLR+Y+ VHL +N+DKFNLLIFM+QKL++L+DQT+ PDN DVLQNQEV
Sbjct: 303  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 362

Query: 1077 LLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKS-SVTIGRSV 1253
            LLPGHLI +YLKEK+ EWL K+RR L DE+ K  NF       VKK + K+ S  I  +V
Sbjct: 363  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAV 422

Query: 1254 ESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLM 1433
            E+MLK GRL T + LDL Q+ GMT+QAERLN+LRF+SHFRAVHRGA F  +RTT VRKL+
Sbjct: 423  ENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 482

Query: 1434 PESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMS 1613
            PE+WGFLCPVHTPDGEPCGLLNHM S C +TSYF++ G  +DF  I+ SI +VLI +GM+
Sbjct: 483  PEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMT 542

Query: 1614 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVP 1793
            P LPKL  AGPPEVL V+LDGRVVGSI  SEVE AV H+RRLK+SA SVIPDDLEVGY+P
Sbjct: 543  PALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIP 602

Query: 1794 LSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR 1967
            LS GGAYPGLYLFTSPSRF+RPVRNIS  ++  H+IELIGPFEQ +MEIRC DG DGGRR
Sbjct: 603  LSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRR 662

Query: 1968 S-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKA 2144
            + FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQA+  R D K 
Sbjct: 663  NIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKL 722

Query: 2145 YHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 2324
            YHLQTPQ+PIVRT++Y KY +DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC G
Sbjct: 723  YHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHG 782

Query: 2325 HIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYD 2498
             IY+TE+IDL++   KS+   ++F RSN D+S NSLIDSDGLPY+GQM+NP EPY S Y+
Sbjct: 783  QIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYN 842

Query: 2499 XXXXXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKG 2678
                        GSEPVIVD V  +    K + QKVNIR R  RNP+IGDKFSSRHGQKG
Sbjct: 843  EVTSSTRATKLKGSEPVIVDYV-ALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 901

Query: 2679 VCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPF 2858
            VCSQLWPDIDMPFS +TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F DATPF
Sbjct: 902  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 961

Query: 2859 ASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQ 3017
            + S+        SE SS VD+LG +L S+GFNYHG EVLYSGFYGTE+TCEIFIGPVYYQ
Sbjct: 962  SDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQ 1021

Query: 3018 RLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHS 3197
            RLRHMVSDKFQVRSTGTVD +TRQP+            EMERDS+LAHGAAYLLHDRLH+
Sbjct: 1022 RLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHT 1081

Query: 3198 CSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAM 3374
            CSD+HIA+VCS CGS+LT ++IQ QKR + +I G+P  +     TC+AC+T KGMETV+M
Sbjct: 1082 CSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSM 1141

Query: 3375 PYVFRYLATELAAMNIKMELKL 3440
            PY+FR+LA ELAAMNIKM L+L
Sbjct: 1142 PYIFRFLAAELAAMNIKMTLQL 1163


>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Vitis
            vinifera]
          Length = 1178

 Score = 1586 bits (4107), Expect = 0.0
 Identities = 789/1162 (67%), Positives = 935/1162 (80%), Gaps = 18/1162 (1%)
 Frame = +3

Query: 9    TEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLS 188
            T  P+   +RELF+ HI+SFD+ ++ G+E  + S++P E+VD  T  KLRI+FG+P L  
Sbjct: 12   TAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYP 71

Query: 189  PRDAMSSRS----IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSK 356
            P+   S+R+    +YP ECR+A+ +Y G+L  +  FQY +GV+IR + + G  PIML SK
Sbjct: 72   PQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSK 131

Query: 357  CCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDG 536
             CHLRGADPQKL+  KEE++EMGGYFI NGLER+ RLLIL KRNYPM +VR SF  R +G
Sbjct: 132  LCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREG 191

Query: 537  YSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI 716
            Y+DKAV++RCVREDQS+VTVKLYYL+NGSARLGFWI+GRE+LLPVG+VLKALIDT DHEI
Sbjct: 192  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 251

Query: 717  YVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEG 896
            Y SLT CY E+Y+  KG VGTQL+GER +IIL+EVR LSLFTR  CL+HIG++F+  ++G
Sbjct: 252  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 311

Query: 897  FETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEV 1076
             E E+Y +VADAVLR+Y+ VHL +N+DKFNLLIFM+QKL++L+DQT+ PDN DVLQNQEV
Sbjct: 312  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 371

Query: 1077 LLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKS-SVTIGRSV 1253
            LLPGHLI +YLKEK+ EWL K+RR L DE+ K  NF       VKK + K+ S  I  +V
Sbjct: 372  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAV 431

Query: 1254 ESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLM 1433
            E+MLK GRL T + LDL Q+ GMT+QAERLN+LRF+SHFRAVHRGA F  +RTT VRKL+
Sbjct: 432  ENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 491

Query: 1434 PESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMS 1613
            PE+WGFLCPVHTPDGEPCGLLNHM S C +TSYF++ G  +DF  I+ SI +VLI +GM+
Sbjct: 492  PEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMT 551

Query: 1614 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVP 1793
            P LPKL  AGPPEVL V+LDGRVVGSI  SEVE AV H+RRLK+SA SVIPDDLEVGY+P
Sbjct: 552  PALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIP 611

Query: 1794 LSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR 1967
            LS GGAYPGLYLFTSPSRF+RPVRNIS  ++  H+IELIGPFEQ +MEIRC DG DGGRR
Sbjct: 612  LSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRR 671

Query: 1968 S-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKA 2144
            + FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQA+  R D K 
Sbjct: 672  NIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKL 731

Query: 2145 YHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 2324
            YHLQTPQ+PIVRT++Y KY +DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC G
Sbjct: 732  YHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHG 791

Query: 2325 HIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYD 2498
             IY+TE+IDL++   KS+   ++F RSN D+S NSLIDSDGLPY+GQM+NP EPY S Y+
Sbjct: 792  QIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYN 851

Query: 2499 XXXXXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKG 2678
                        GSEPVIVD V  +    K + QKVNIR R  RNP+IGDKFSSRHGQKG
Sbjct: 852  EVTSSTRATKLKGSEPVIVDYV-ALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 910

Query: 2679 VCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPF 2858
            VCSQLWPDIDMPFS +TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F DATPF
Sbjct: 911  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 970

Query: 2859 ASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQ 3017
            + S+        SE SS VD+LG +L S+GFNYHG EVLYSGFYGTE+TCEIFIGPVYYQ
Sbjct: 971  SDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQ 1030

Query: 3018 RLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHS 3197
            RLRHMVSDKFQVRSTGTVD +TRQP+            EMERDS+LAHGAAYLLHDRLH+
Sbjct: 1031 RLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHT 1090

Query: 3198 CSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAM 3374
            CSD+HIA+VCS CGS+LT ++IQ QKR + +I G+P  +     TC+AC+T KGMETV+M
Sbjct: 1091 CSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSM 1150

Query: 3375 PYVFRYLATELAAMNIKMELKL 3440
            PY+FR+LA ELAAMNIKM L+L
Sbjct: 1151 PYIFRFLAAELAAMNIKMTLQL 1172


>ref|XP_008664805.1| DNA-directed RNA polymerase I subunit 2 [Zea mays]
          Length = 1178

 Score = 1579 bits (4089), Expect = 0.0
 Identities = 775/1159 (66%), Positives = 942/1159 (81%), Gaps = 14/1159 (1%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RDAM 203
            + +RELF+PH+ESFDYF+DKG++  I SIRP  I DP ++  L+I   +  +LSP R A 
Sbjct: 19   SALRELFRPHVESFDYFLDKGLDEMIESIRPMVIRDPNSSNTLKIILEKGHVLSPMRGAR 78

Query: 204  SS-RSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGAD 380
                 IYPQECR+AR +Y GE  VE  FQYN+G  IRH  +FG+LPIMLMSK CHLRGAD
Sbjct: 79   PGVLPIYPQECRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRGAD 138

Query: 381  PQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIV 560
            P KL+FH EEATEMGGYFIC G+ERL R+L+LQKRNYPMGLVR SF  RG GY+DKAV++
Sbjct: 139  PHKLVFHGEEATEMGGYFICGGMERLVRILVLQKRNYPMGLVRNSFLKRGAGYTDKAVVI 198

Query: 561  RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCY 740
            RCV+ DQSSVT+KLYY+ NGSARLGFW+ GREFLLPVGIVLKALID +D EI+ SLT CY
Sbjct: 199  RCVQRDQSSVTIKLYYILNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLTCCY 258

Query: 741  KERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKV 920
             +++ R KGVV TQLIGERAQI+L+EVR LS+ TR+ CL HIG YF+  +EGFE ++Y  
Sbjct: 259  SDKHGRGKGVVSTQLIGERAQIVLDEVRNLSILTRTQCLVHIGQYFRSVMEGFENDDYIT 318

Query: 921  VADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIA 1100
            VA+AVL+DY+ VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHL  
Sbjct: 319  VAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGHLFT 378

Query: 1101 LYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRL 1280
            ++LK+++ EWLRKS+R +L+E  K   F++ +  +++KFL K + ++GR+VESM+KVG +
Sbjct: 379  VFLKDRLQEWLRKSKRLILEEAAKNKGFDLGNALEIRKFLTKYTTSVGRAVESMIKVGNV 438

Query: 1281 ATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCP 1460
             + + LDLPQ++GMTI AERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCP
Sbjct: 439  NSRSGLDLPQREGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLCP 498

Query: 1461 VHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHA 1640
            VHTPDGEPCGLLNHMTS C V+S++N+EG IK+F ++++ +   L+R+GM+P+LPK+E  
Sbjct: 499  VHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNFGEMKKLLSAELVRVGMNPVLPKIEQT 558

Query: 1641 GPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPG 1820
            GPPEVL V LDG ++G+IA + +EKAV ++R LKL A S IP+DLEVGYVP SF GA+PG
Sbjct: 559  GPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLKLLAHSGIPEDLEVGYVPPSFNGAFPG 618

Query: 1821 LYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRRS-FPATHEE 1991
            LYLFT+P+RF+RPVRN+   +D   +IELIGPFEQAFMEIRC DGGDGGR+  FPATHEE
Sbjct: 619  LYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEPFPATHEE 678

Query: 1992 IHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSP 2171
            IHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQ+P
Sbjct: 679  IHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTP 738

Query: 2172 IVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESID 2351
            IVRT +Y KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+V+RG+ RGHIY+TE ID
Sbjct: 739  IVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTECID 798

Query: 2352 LAERQEKSNPLKIFARS-NDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXX 2528
            L+ +   + P + FA+S   R T+++IDSDGLP +GQ V+P E YYS ++          
Sbjct: 799  LSTKSRDNVP-ETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVHNSLTNVIRPVK 857

Query: 2529 XXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDID 2708
              G+EP  +D V V GTG+K  +QK NIR R +RNP+IGDKFSSRHGQKGVCSQLWPDID
Sbjct: 858  LKGTEPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDID 917

Query: 2709 MPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVESERSS 2888
            MPFSA TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSL G+F DATPFA+S++ ++ S
Sbjct: 918  MPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANSLKKDKDS 977

Query: 2889 Q-----VDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 3053
                  VD+LGP+LAS+GFNYHG+EVLYSG +GTEM CEIFIGPVYYQRLRHMVSDKFQV
Sbjct: 978  DKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQV 1037

Query: 3054 RSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 3233
            R+TG +D ITRQP+            EMERD++LAHG++YLLHDRLHSCSDYHIA+VCSF
Sbjct: 1038 RTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSF 1097

Query: 3234 CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 3404
            CGSLLTAT+I+   Q+K   ++ G+P  + +  F C ACKT KGMETVAMPYVFRYLA E
Sbjct: 1098 CGSLLTATMIKSDTQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAMPYVFRYLAAE 1157

Query: 3405 LAAMNIKMELKLK*QSWGP 3461
            LAAMNIK+EL+L  +S  P
Sbjct: 1158 LAAMNIKLELRLSNKSGLP 1176


>gb|PKA48040.1| DNA-directed RNA polymerase II subunit RPB2 [Apostasia shenzhenica]
          Length = 1171

 Score = 1568 bits (4060), Expect = 0.0
 Identities = 772/1158 (66%), Positives = 929/1158 (80%), Gaps = 18/1158 (1%)
 Frame = +3

Query: 21   NNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RD 197
            N A++REL + H+ESFDYF+D+G+  A+  IRP +IVD TT + L+I+  +  L  P ++
Sbjct: 8    NYASLRELVRHHVESFDYFLDEGLAKALMEIRPCKIVDKTTGSILKIFVEKHYLYPPTKE 67

Query: 198  AMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGA 377
               +  IYP ECR+  T+YRGE  +E   QY+ GV +R ++SFG+LPIMLMSK CHL+G 
Sbjct: 68   GRRNEPIYPAECRQTMTSYRGEFKIEVGLQYDGGVVVREKISFGHLPIMLMSKLCHLKGV 127

Query: 378  DPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVI 557
            DPQ+L+ HKEEA+E+GGYFICNGLERL R+L++QKRN+P+ LVR++F  RGDG+SDKAV 
Sbjct: 128  DPQRLVHHKEEASEVGGYFICNGLERLGRVLMIQKRNHPVSLVRRNFRGRGDGFSDKAVR 187

Query: 558  VRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSC 737
            +RCVREDQSSV   LYYLQNGSAR GF I G+E+LLPVG+VLKALIDT+DHEIYVSLT C
Sbjct: 188  IRCVREDQSSVNFSLYYLQNGSARAGFRILGKEYLLPVGLVLKALIDTSDHEIYVSLTCC 247

Query: 738  YKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYK 917
            Y E+++ +KG VGTQL+GERAQIIL+E+R LSL TRS CLKHIG++F+P +   + E+  
Sbjct: 248  YSEKFRNDKGAVGTQLVGERAQIILDELRSLSLMTRSQCLKHIGNHFRPVLSRLDAESDT 307

Query: 918  VVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLI 1097
               +AVLRDYVLVHL SNHDKFNLLIFMLQKL+ALVDQTAAPD+ D LQN EVLL GH++
Sbjct: 308  AFGEAVLRDYVLVHLNSNHDKFNLLIFMLQKLFALVDQTAAPDHVDALQNMEVLLIGHVM 367

Query: 1098 ALYLKEKVVEWLRKSRRQLLDEMTK-ANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVG 1274
             +Y+KEK+  WL K +R ++DEM + A +F+  D  ++KK + + +  + RS+ES++KVG
Sbjct: 368  TVYIKEKLEAWLEKGKRLIIDEMNRNAQDFDFRDLHKMKKIVSRYASAVSRSIESLIKVG 427

Query: 1275 RLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFL 1454
            R+ TL  LDLPQ +G+TIQAERLNYLRFISHFR+VHRGA F KMRTT VRKL+PESWGFL
Sbjct: 428  RVVTLTGLDLPQTEGLTIQAERLNYLRFISHFRSVHRGASFAKMRTTTVRKLLPESWGFL 487

Query: 1455 CPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLE 1634
            CPVHTPDG PCGLLNH+ S C + S+++  G +KDF  I+ SI +VLI LGM+PLLP++E
Sbjct: 488  CPVHTPDGIPCGLLNHLASTCRIASFYDRNGLLKDFAKIRMSILSVLIGLGMTPLLPRVE 547

Query: 1635 HAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAY 1814
            H GPPEVL VLLDG V+GS+A   ++KAV H+R LKLS++S IPDDLEVGYVPLS GGAY
Sbjct: 548  HTGPPEVLHVLLDGCVIGSMASDNLDKAVWHLRSLKLSSSSGIPDDLEVGYVPLSEGGAY 607

Query: 1815 PGLYLFTSPSRFIRPVRNISHAT--DHNIELIGPFEQAFMEIRCADGGDGGRR-SFPATH 1985
            PGLYLF SPSRFIRPV+NIS +   D N+EL+GPFEQAFMEI C D GDGGRR SFPATH
Sbjct: 608  PGLYLFCSPSRFIRPVKNISISAVCDTNVELVGPFEQAFMEISCPDNGDGGRRESFPATH 667

Query: 1986 EEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQ 2165
            EEIHPT ILSV+ANLTPWSDHNQSPRNMYQCQMAKQTMGFS QAL+FR D K YHLQTPQ
Sbjct: 668  EEIHPTAILSVIANLTPWSDHNQSPRNMYQCQMAKQTMGFSGQALQFRADNKTYHLQTPQ 727

Query: 2166 SPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTES 2345
            SPIVRT SY K+C+DEFPTG NAIVAVLAYSGYDMEDAMILNKSSV+RGL RGHIY+TE+
Sbjct: 728  SPIVRTASYTKFCVDEFPTGANAIVAVLAYSGYDMEDAMILNKSSVERGLFRGHIYQTET 787

Query: 2346 IDLAERQEKSNP-LKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXX 2522
            IDLA +++ +   L+IF+R  ++   S +DSDGLP++GQ + P  P YS+Y+        
Sbjct: 788  IDLANKKKGAEKVLEIFSRGTNKGLQSSVDSDGLPFVGQTIQPGGPKYSSYNTLTSTTST 847

Query: 2523 XXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPD 2702
                GSE +IVD + V G+ TKNY+QKVN+R+R +RNPVIGDKFSSRHGQKGVCSQLWPD
Sbjct: 848  SLLKGSESLIVDYIAVDGSATKNYIQKVNLRSRRVRNPVIGDKFSSRHGQKGVCSQLWPD 907

Query: 2703 IDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSV---- 2870
            +DMPFSA+TG+RPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F DATPFASS     
Sbjct: 908  VDMPFSAVTGIRPDLIINPHAFPSRMTIGMLLESIAAKGGSLQGKFVDATPFASSTLKND 967

Query: 2871 ---ESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSD 3041
                SE+ S VD++GPILAS+GFNYHG EVLYSG  GTE+TCEIFIGPVYYQRLRHMVSD
Sbjct: 968  ADKSSEKVSLVDEIGPILASYGFNYHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSD 1027

Query: 3042 KFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAE 3221
            KFQVRSTG VD ITRQP+            EMERDS+LAHGAAYLLHDRLHS SDYHIA+
Sbjct: 1028 KFQVRSTGAVDQITRQPIGGRKRGGGIRFGEMERDSILAHGAAYLLHDRLHSSSDYHIAD 1087

Query: 3222 VCSFCGSLLTATVIQQQKRLL-----DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVF 3386
            VCS CGSLLT+T++Q QKR        +P +         TC  CK+ K METVAMPYVF
Sbjct: 1088 VCSQCGSLLTSTIVQPQKREFRDVKSGLPPLRSGSSEKNATCVYCKSSKRMETVAMPYVF 1147

Query: 3387 RYLATELAAMNIKMELKL 3440
            R+LA ELAAMN+K++++L
Sbjct: 1148 RFLAAELAAMNVKLDIRL 1165


>ref|XP_006661904.2| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Oryza
            brachyantha]
          Length = 1177

 Score = 1568 bits (4060), Expect = 0.0
 Identities = 775/1152 (67%), Positives = 932/1152 (80%), Gaps = 14/1152 (1%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSPRD-AM 203
            A +RELF+PHI+SFDYFID+G++  + SIRP EI    ++  LRI   +  L  P+    
Sbjct: 15   AALRELFRPHIDSFDYFIDEGLDKMLLSIRPLEISVHGSSVTLRISLEKGHLFPPKSYGR 74

Query: 204  SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 383
                +YPQ+CR+ RT+Y GE  V+ F Q NDG SIR   SFG+LPIMLMSK CHLRGADP
Sbjct: 75   LDAPLYPQQCRQTRTSYHGEFKVDAFIQCNDGPSIRETFSFGHLPIMLMSKLCHLRGADP 134

Query: 384  QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 563
            +KLIF  EEATEMGGYFIC G+ERL R+LIL KRNYPMGL+R +F  RG GY+D+AV++R
Sbjct: 135  EKLIFLGEEATEMGGYFICAGMERLVRILILLKRNYPMGLIRGAFVNRGAGYTDQAVVIR 194

Query: 564  CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 743
            CV++DQSSVT+KLYYL NGSARLGFW+  REFLLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 195  CVQDDQSSVTIKLYYLLNGSARLGFWLGAREFLLPVGIVLKALIDTSDWEIFTSLTCCYS 254

Query: 744  ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 923
            + Y+  KGVV T LI +RAQIIL+EVR LSLFTR++CL HIG YF+  +EGFE ++++ V
Sbjct: 255  DHYRTGKGVVSTPLIADRAQIILDEVRVLSLFTRTECLLHIGKYFRSVMEGFEKDDFETV 314

Query: 924  ADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIAL 1103
            A+AVL+DY+ VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHLI +
Sbjct: 315  AEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYALVDQTASPDNADALQYQEALLPGHLITV 374

Query: 1104 YLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRLA 1283
            +LK+++ +WLRKS+R +++E TK  +F++ +  +V++FL K+S  +GR++ESM+KVG++ 
Sbjct: 375  FLKDRLQDWLRKSKRLIVEEATKNKSFDLSNSREVRRFLSKTSQYVGRAIESMIKVGKVN 434

Query: 1284 TLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCPV 1463
            + + LDLPQ+DGMTI AERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCPV
Sbjct: 435  SQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPV 494

Query: 1464 HTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHAG 1643
            HTPDGEPCGLLNHMTS C V+S++N+ G IKDF+ I+ S+   L+  GM+ LLP++E  G
Sbjct: 495  HTPDGEPCGLLNHMTSTCRVSSFYNSGGAIKDFQKIKMSLIAHLVGAGMAQLLPRIERTG 554

Query: 1644 PPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPGL 1823
            PPEVL V LDG +VGSIA +++E+ V ++R LKL A S IP+DLEVGYVPLS GGAYPGL
Sbjct: 555  PPEVLHVHLDGCIVGSIAAAKIEEVVNYLRSLKLLAHSGIPEDLEVGYVPLSLGGAYPGL 614

Query: 1824 YLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRRS-FPATHEEI 1994
            YLFT+P+RFIRPVR++   +D   +IELIGPFEQAFMEIRC DGGDGGR+  FPATHEEI
Sbjct: 615  YLFTNPARFIRPVRSLLGLSDGGPSIELIGPFEQAFMEIRCPDGGDGGRKELFPATHEEI 674

Query: 1995 HPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSPI 2174
            HPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQ+PI
Sbjct: 675  HPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPI 734

Query: 2175 VRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESIDL 2354
            VRT +Y+KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RGHIY+TE IDL
Sbjct: 735  VRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDL 794

Query: 2355 AERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXXX 2531
            +E+  + N ++ F +SN  R T ++IDSDGLP IG+ + P E YYS  +           
Sbjct: 795  SEK-SRDNAVEFFCKSNLLRDTTAVIDSDGLPCIGEKIFPNEQYYSVCNNLTGVVRPVKL 853

Query: 2532 XGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDIDM 2711
             GSEP  +D V V GT  KN +QK N+R R +RNP+IGDKFSSRHGQKGVCSQLWPDIDM
Sbjct: 854  KGSEPAAIDYVAVNGTNFKNRLQKANVRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDM 913

Query: 2712 PFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVESE---- 2879
            PFSA TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSL G+F DATPF+SSVE      
Sbjct: 914  PFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLTGKFMDATPFSSSVEKRDENS 973

Query: 2880 --RSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 3053
               +S VD+LGP+LAS+GFNYHG+EVLYSG +GTEM CEIF+GPVYYQRLRHMVSDKFQV
Sbjct: 974  CTSNSIVDELGPMLASYGFNYHGTEVLYSGVFGTEMNCEIFLGPVYYQRLRHMVSDKFQV 1033

Query: 3054 RSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 3233
            R+TG +D ITRQPV            EMERD+VLAHGA+YLLHDRLHSCSDYHIA+VCS 
Sbjct: 1034 RTTGRIDQITRQPVGGRKFGGGIRFGEMERDAVLAHGASYLLHDRLHSCSDYHIADVCSL 1093

Query: 3234 CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 3404
            CGSLLTATVI+   Q+K   D+ G+P  + +  F C ACKT KGMETVAMPYVFRYLA E
Sbjct: 1094 CGSLLTATVIKSESQKKAKQDMLGLPTVRPAKNFACQACKTTKGMETVAMPYVFRYLAAE 1153

Query: 3405 LAAMNIKMELKL 3440
            LAAMNIK+EL+L
Sbjct: 1154 LAAMNIKLELRL 1165


>ref|XP_010067710.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1
            [Eucalyptus grandis]
 gb|KCW65881.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1173

 Score = 1563 bits (4046), Expect = 0.0
 Identities = 780/1165 (66%), Positives = 931/1165 (79%), Gaps = 19/1165 (1%)
 Frame = +3

Query: 3    SKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRL 182
            +K +  +   +RELF+ HIESFD+ +D+G+E  ++ I+P +I DP+++  L+I+F +P +
Sbjct: 4    TKADAADYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEV 63

Query: 183  LSPRDAMSSRS----IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLM 350
              P+   SS++    + P ECR+A+T+Y G+  V  +FQY+D V++  + +FG+LPIML 
Sbjct: 64   YQPQKEGSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPIMLK 123

Query: 351  SKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARG 530
            SK C+L GADPQKL+  KEE++EMGGYFI NGLER+ RLLIL KRNYPM +VR SF  R 
Sbjct: 124  SKLCYLNGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRR 183

Query: 531  DGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDH 710
            +GY+DKAV++RCVREDQSSVTVKLYYLQNGSARLGFWI+ RE+LLPVG+VLKALIDTNDH
Sbjct: 184  EGYTDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDH 243

Query: 711  EIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAI 890
            EIY SLTSCY E+Y R KGVVG QL+ ERA+IIL+E+R L+LFTR  CL+HIG++F+P +
Sbjct: 244  EIYSSLTSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVM 303

Query: 891  EGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQ 1070
            +G E E++  VA+AVL+DY+ VHL +N+DKFNLLIFM+QKL++L+DQT++PDN D LQNQ
Sbjct: 304  DGLENESFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQ 363

Query: 1071 EVLLPGHLIALYLKEKVVEWLRKSRRQLLDEM-TKANNFNIIDPDQVKKFLGKS-SVTIG 1244
            EVLLPGHLI +YLK+K+ +WL+K+++ L DE+  KA NF+      VKK + K+    IG
Sbjct: 364  EVLLPGHLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIG 423

Query: 1245 RSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVR 1424
             ++E+MLK GRL T + LDL Q+ G T+QAERLN+LRF+SHFRAVHRGA F  +RTT VR
Sbjct: 424  SAIENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVR 483

Query: 1425 KLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRL 1604
            KL+PESWGFLCPVHTPDGEPCGLLNHMT  C +TS+F+++G  +DF  I+ SI NVLI +
Sbjct: 484  KLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGI 543

Query: 1605 GMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVG 1784
            GM+P LPK+  AGPP+VL VLLDGRVVGSI  +EVEKAV+++RRLKLS TS IPDDLEVG
Sbjct: 544  GMTPSLPKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVG 603

Query: 1785 YVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDG 1958
            YVPLSFGGAYPGLYLFT+PSRF RPVRNIS   D   NIELIGPFEQ FMEIRC DGGDG
Sbjct: 604  YVPLSFGGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDGGDG 663

Query: 1959 GRRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTD 2135
            GRR+ FPATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQA+ FR D
Sbjct: 664  GRRNEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFRAD 723

Query: 2136 VKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGL 2315
             K YHLQTPQ+PIVRT +Y KYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+RG+
Sbjct: 724  QKLYHLQTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVERGM 783

Query: 2316 CRGHIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYS 2489
              G IY+TE+IDL+E+  KS+   ++F RSN D+S +  IDSDGLPY+GQM+ P EPY S
Sbjct: 784  FHGQIYQTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEPYCS 843

Query: 2490 TYDXXXXXXXXXXXXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHG 2669
             Y+            GSE  IVD V  V T TK  +QK NIR R  RNPVIGDKFSSRHG
Sbjct: 844  VYNEVTTTTKNHLRKGSESAIVDYV-AVDTKTKKGLQKANIRFRHPRNPVIGDKFSSRHG 902

Query: 2670 QKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDA 2849
            QKGVCSQLWPD+DMPFS ITGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GEF DA
Sbjct: 903  QKGVCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFVDA 962

Query: 2850 TPFASSV-------ESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPV 3008
            TPFASS        +SE    VD++G  L   GFNYHG EVLYSG YGTE+TCEIFIGPV
Sbjct: 963  TPFASSTKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFIGPV 1022

Query: 3009 YYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDR 3188
            YYQRLRHMVSDKFQVRSTGTVD +TRQP+            EMERDS++AHGAAYLLHDR
Sbjct: 1023 YYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMVAHGAAYLLHDR 1082

Query: 3189 LHSCSDYHIAEVCSFCGSLLTATVIQQQKRL-LDIPGIPQAKVSPTFTCNACKTRKGMET 3365
            LH+CSDYHIA+VCS CGS+LT   +Q Q+R   +I G+P  +     TC+AC+T +GMET
Sbjct: 1083 LHTCSDYHIADVCSLCGSILTTQFVQPQRRPGREIGGLPPIRAPKKVTCHACQTSRGMET 1142

Query: 3366 VAMPYVFRYLATELAAMNIKMELKL 3440
            VAMPYVFRYLA ELAAMNIKM L L
Sbjct: 1143 VAMPYVFRYLAAELAAMNIKMTLHL 1167


>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Brachypodium
            distachyon]
 gb|KQJ97293.1| hypothetical protein BRADI_3g29917v3 [Brachypodium distachyon]
          Length = 1181

 Score = 1558 bits (4033), Expect = 0.0
 Identities = 765/1152 (66%), Positives = 933/1152 (80%), Gaps = 14/1152 (1%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RDAM 203
            AT+REL++PHIESFDYF+D+G++  + SIRP +I  P+++  LRI   +  LL P RD  
Sbjct: 21   ATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRDVR 80

Query: 204  SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 383
             ++ +YPQECR+AR +Y GE  V+T FQ+N+G  +R   +FG+LPIMLMSK CHLRGAD 
Sbjct: 81   MAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGADS 140

Query: 384  QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 563
            +KLI+H EEATEMGGYFI  G+ERL R+L+LQKRNYPMG+VR +F  RG GY+DKAV++R
Sbjct: 141  RKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVVIR 200

Query: 564  CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 743
            CV++DQ+SVTVKLYYLQNGSARLGFW+  RE LLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 201  CVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVLKALIDTSDREIFASLTCCYS 260

Query: 744  ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 923
            ++Y+R KGVV  QLIGERAQIIL+EVR LSL TR+ CL+HIG YF+ A+EGFE ++Y+ V
Sbjct: 261  DKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEHIGQYFRSAMEGFEKDDYQTV 320

Query: 924  ADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIAL 1103
            A+AVL+DYVLVHL +NH KFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPG+LI +
Sbjct: 321  AEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGYLITV 380

Query: 1104 YLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRLA 1283
            +LK+++ +WLRKS+R +++E TK  +F   +  +++KFL K S ++GR++ES++K+GR  
Sbjct: 381  FLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLCKHSTSVGRAIESLIKIGRAN 440

Query: 1284 TLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCPV 1463
            + + LDLPQ++GM+IQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCPV
Sbjct: 441  SQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAKMRTTTVRKLLPESWGFLCPV 500

Query: 1464 HTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHAG 1643
            HTPDGEPCGLLNHMTSAC ++S++++EG +KDF  I+  +   L+R GM PL PK+EH G
Sbjct: 501  HTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRLLAELVRGGMIPLSPKMEHTG 560

Query: 1644 PPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPGL 1823
            PPEVL V LDG +VGSI  +++E+ V +IRRLKL A    P+DLEVGYVPLS GGAYPGL
Sbjct: 561  PPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPATPEDLEVGYVPLSIGGAYPGL 620

Query: 1824 YLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHEEI 1994
            Y FTSP+RF+RPV+N+    D   +IELIG FEQAFMEIRC DGGDGGR+ SFPATHEEI
Sbjct: 621  YFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIRCPDGGDGGRKESFPATHEEI 680

Query: 1995 HPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSPI 2174
            HPT +LSVVANLTPWS+HNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQSPI
Sbjct: 681  HPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQSPI 740

Query: 2175 VRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESIDL 2354
            VRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG IY+TE IDL
Sbjct: 741  VRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECIDL 800

Query: 2355 AERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXXX 2531
            +  + + +  +IFA+S+  R ++S+IDSDGLP +G+ + P E YYSTY+           
Sbjct: 801  STTR-RGSVAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRPTRL 859

Query: 2532 XGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDIDM 2711
             G+EP  +D V V GT +K  +QKVNIR R  RNP+IGDKFSSRHGQKGVCSQLWPDIDM
Sbjct: 860  KGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDM 919

Query: 2712 PFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVES----- 2876
            PFSA TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSL G F DATPFASSV+      
Sbjct: 920  PFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLHGNFVDATPFASSVKEGDGNP 979

Query: 2877 -ERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 3053
             +  S VD++GP+LAS+GFNYHG EVLYSG +GTE+TCEIFIGPVYYQRLRHMVSDKFQV
Sbjct: 980  WKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGPVYYQRLRHMVSDKFQV 1039

Query: 3054 RSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 3233
            R+TG +D +TRQP+            EMERD++LAHGA+YLLHDRLHSCSDYHIA+VCS 
Sbjct: 1040 RTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSL 1099

Query: 3234 CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 3404
            CGSLLTATVI+   Q K   ++ G+   K      C AC+T KGMETVAMPYVFRYLA E
Sbjct: 1100 CGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQTNKGMETVAMPYVFRYLAAE 1159

Query: 3405 LAAMNIKMELKL 3440
            LAAMN+K++L+L
Sbjct: 1160 LAAMNVKLDLRL 1171


>ref|XP_020150652.1| DNA-directed RNA polymerase I subunit 2 isoform X2 [Aegilops tauschii
            subsp. tauschii]
          Length = 1176

 Score = 1551 bits (4015), Expect = 0.0
 Identities = 763/1153 (66%), Positives = 934/1153 (81%), Gaps = 15/1153 (1%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RDAM 203
            AT+REL++PHIESFDYF+D+G++  + SIRP EI DP++N  LR+   +  +L P +D  
Sbjct: 12   ATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITDPSSNATLRMSLEKGHVLPPMKDGR 71

Query: 204  SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 383
              + +YPQECR+ R +Y GE  VE  FQ+NDG  IR   +FG+LPIMLMSK CHLRGADP
Sbjct: 72   LEQPLYPQECRQGRISYSGEFKVEAVFQFNDGAPIRQTFNFGHLPIMLMSKLCHLRGADP 131

Query: 384  QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 563
             KLI+H EEATEMGGYFI  GLERL R+LILQKRNYPMG+VR +F  RG GY+DKAV++R
Sbjct: 132  CKLIYHGEEATEMGGYFISGGLERLIRILILQKRNYPMGMVRGAFIKRGAGYTDKAVVMR 191

Query: 564  CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 743
            CV  DQSSVTVKLYYLQNGSARLGFW  GRE LLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 192  CVHHDQSSVTVKLYYLQNGSARLGFWFAGREILLPVGIVLKALIDTSDREIFASLTCCYS 251

Query: 744  ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 923
            ++ +R KGVV TQLIGER QIIL+EVR LSLFTR+ CL HIG YF+ A+EGFE ++Y+ V
Sbjct: 252  DKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQCLVHIGKYFRSAMEGFEKDDYETV 311

Query: 924  ADAVLRDYVLVHLTS-NHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIA 1100
            A+AV++D++LVHL + NH KFNLLIFMLQKLYALVDQT +PDN D LQ QE LLPGHLI 
Sbjct: 312  AEAVIKDHILVHLQNDNHAKFNLLIFMLQKLYALVDQTTSPDNPDALQFQEALLPGHLIT 371

Query: 1101 LYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRL 1280
            ++LK+++ +WL+KS+R +++E+TK  +F + +  +++KFL K + ++GR++E+++KVGR 
Sbjct: 372  VFLKDRIQDWLQKSKRLIMEEITKNKSFELNNSLEIRKFLSKYTTSVGRAIETLIKVGRA 431

Query: 1281 ATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCP 1460
             + + LDLPQ++GMTIQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCP
Sbjct: 432  NSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSSFAKMRTTTVRKLLPESWGFLCP 491

Query: 1461 VHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHA 1640
            VHTPDGEPCGLLNHMTS C ++S +N+EG IKDF+ I+  +   L+R GM PLLPK+EH 
Sbjct: 492  VHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIKDKLLVELVRGGMIPLLPKMEHT 551

Query: 1641 GPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPG 1820
            GPPEVL V LDG +VGSIA +++E+ V ++RRLKL A    P+DLEVGYVPLS GGAYPG
Sbjct: 552  GPPEVLHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAHPATPEDLEVGYVPLSLGGAYPG 611

Query: 1821 LYLFTSPSRFIRPVRNISHATDHN--IELIGPFEQAFMEIRCADGGDGGRRS-FPATHEE 1991
            LYLFTSP+RF+RPV+N+    D    IELIGPFEQAFMEIRC DGGDGGR+  FPATHEE
Sbjct: 612  LYLFTSPARFVRPVKNLVSLPDGETRIELIGPFEQAFMEIRCPDGGDGGRKKEFPATHEE 671

Query: 1992 IHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSP 2171
            IHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL++RTDVKA+HLQTPQSP
Sbjct: 672  IHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKYRTDVKAFHLQTPQSP 731

Query: 2172 IVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESID 2351
            IVRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG I++TE ID
Sbjct: 732  IVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIFQTECID 791

Query: 2352 LAERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXX 2528
            L+ ++ ++ P +IFA+S   R T+++IDSDGLP +G+ V P E YYS Y+          
Sbjct: 792  LSAKRTENVP-EIFAKSPLSRDTDNVIDSDGLPRVGETVVPYEQYYSIYNTLTGAIRPVR 850

Query: 2529 XXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDID 2708
              G+EP  +D V + GT +K  +QKVNIR R  RNP+IGDKFSSRHGQKGVCSQLWPDID
Sbjct: 851  LKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDID 910

Query: 2709 MPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVESERSS 2888
            MPFSA TGMRPDLIINPHAFPSRMTI ML+ESIAAKAGS+ G+F DATPFASSV+ +  +
Sbjct: 911  MPFSANTGMRPDLIINPHAFPSRMTIAMLIESIAAKAGSVHGKFIDATPFASSVKEDGEN 970

Query: 2889 Q------VDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQ 3050
            +      VD+LGP+LAS+GFN+HG+EVLYSG +GTE+  EIFIGPVYYQRLRHMVSDKFQ
Sbjct: 971  RCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTELQFEIFIGPVYYQRLRHMVSDKFQ 1030

Query: 3051 VRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCS 3230
            VR+TG +D +T+QP+            EMERD++LAHGA+YLLHDRLH+CSDYH+A+VCS
Sbjct: 1031 VRTTGRIDQVTKQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHTCSDYHVADVCS 1090

Query: 3231 FCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLAT 3401
             CGSLL+ATVI+   Q+K    + G+   + +  FTC AC+T KGMETVAMPYVFRYLA 
Sbjct: 1091 LCGSLLSATVIKSDTQKKSKRHLLGVNTVRPAKNFTCQACQTNKGMETVAMPYVFRYLAA 1150

Query: 3402 ELAAMNIKMELKL 3440
            ELAAMNIK++L+L
Sbjct: 1151 ELAAMNIKLDLRL 1163


>ref|XP_020150651.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Aegilops tauschii
            subsp. tauschii]
          Length = 1187

 Score = 1551 bits (4015), Expect = 0.0
 Identities = 763/1153 (66%), Positives = 934/1153 (81%), Gaps = 15/1153 (1%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RDAM 203
            AT+REL++PHIESFDYF+D+G++  + SIRP EI DP++N  LR+   +  +L P +D  
Sbjct: 23   ATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITDPSSNATLRMSLEKGHVLPPMKDGR 82

Query: 204  SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 383
              + +YPQECR+ R +Y GE  VE  FQ+NDG  IR   +FG+LPIMLMSK CHLRGADP
Sbjct: 83   LEQPLYPQECRQGRISYSGEFKVEAVFQFNDGAPIRQTFNFGHLPIMLMSKLCHLRGADP 142

Query: 384  QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 563
             KLI+H EEATEMGGYFI  GLERL R+LILQKRNYPMG+VR +F  RG GY+DKAV++R
Sbjct: 143  CKLIYHGEEATEMGGYFISGGLERLIRILILQKRNYPMGMVRGAFIKRGAGYTDKAVVMR 202

Query: 564  CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 743
            CV  DQSSVTVKLYYLQNGSARLGFW  GRE LLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 203  CVHHDQSSVTVKLYYLQNGSARLGFWFAGREILLPVGIVLKALIDTSDREIFASLTCCYS 262

Query: 744  ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 923
            ++ +R KGVV TQLIGER QIIL+EVR LSLFTR+ CL HIG YF+ A+EGFE ++Y+ V
Sbjct: 263  DKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQCLVHIGKYFRSAMEGFEKDDYETV 322

Query: 924  ADAVLRDYVLVHLTS-NHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIA 1100
            A+AV++D++LVHL + NH KFNLLIFMLQKLYALVDQT +PDN D LQ QE LLPGHLI 
Sbjct: 323  AEAVIKDHILVHLQNDNHAKFNLLIFMLQKLYALVDQTTSPDNPDALQFQEALLPGHLIT 382

Query: 1101 LYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRL 1280
            ++LK+++ +WL+KS+R +++E+TK  +F + +  +++KFL K + ++GR++E+++KVGR 
Sbjct: 383  VFLKDRIQDWLQKSKRLIMEEITKNKSFELNNSLEIRKFLSKYTTSVGRAIETLIKVGRA 442

Query: 1281 ATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCP 1460
             + + LDLPQ++GMTIQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCP
Sbjct: 443  NSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSSFAKMRTTTVRKLLPESWGFLCP 502

Query: 1461 VHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHA 1640
            VHTPDGEPCGLLNHMTS C ++S +N+EG IKDF+ I+  +   L+R GM PLLPK+EH 
Sbjct: 503  VHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIKDKLLVELVRGGMIPLLPKMEHT 562

Query: 1641 GPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPG 1820
            GPPEVL V LDG +VGSIA +++E+ V ++RRLKL A    P+DLEVGYVPLS GGAYPG
Sbjct: 563  GPPEVLHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAHPATPEDLEVGYVPLSLGGAYPG 622

Query: 1821 LYLFTSPSRFIRPVRNISHATDHN--IELIGPFEQAFMEIRCADGGDGGRRS-FPATHEE 1991
            LYLFTSP+RF+RPV+N+    D    IELIGPFEQAFMEIRC DGGDGGR+  FPATHEE
Sbjct: 623  LYLFTSPARFVRPVKNLVSLPDGETRIELIGPFEQAFMEIRCPDGGDGGRKKEFPATHEE 682

Query: 1992 IHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSP 2171
            IHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL++RTDVKA+HLQTPQSP
Sbjct: 683  IHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKYRTDVKAFHLQTPQSP 742

Query: 2172 IVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESID 2351
            IVRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG I++TE ID
Sbjct: 743  IVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIFQTECID 802

Query: 2352 LAERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXX 2528
            L+ ++ ++ P +IFA+S   R T+++IDSDGLP +G+ V P E YYS Y+          
Sbjct: 803  LSAKRTENVP-EIFAKSPLSRDTDNVIDSDGLPRVGETVVPYEQYYSIYNTLTGAIRPVR 861

Query: 2529 XXGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDID 2708
              G+EP  +D V + GT +K  +QKVNIR R  RNP+IGDKFSSRHGQKGVCSQLWPDID
Sbjct: 862  LKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDID 921

Query: 2709 MPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFKDATPFASSVESERSS 2888
            MPFSA TGMRPDLIINPHAFPSRMTI ML+ESIAAKAGS+ G+F DATPFASSV+ +  +
Sbjct: 922  MPFSANTGMRPDLIINPHAFPSRMTIAMLIESIAAKAGSVHGKFIDATPFASSVKEDGEN 981

Query: 2889 Q------VDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQ 3050
            +      VD+LGP+LAS+GFN+HG+EVLYSG +GTE+  EIFIGPVYYQRLRHMVSDKFQ
Sbjct: 982  RCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTELQFEIFIGPVYYQRLRHMVSDKFQ 1041

Query: 3051 VRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCS 3230
            VR+TG +D +T+QP+            EMERD++LAHGA+YLLHDRLH+CSDYH+A+VCS
Sbjct: 1042 VRTTGRIDQVTKQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHTCSDYHVADVCS 1101

Query: 3231 FCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLAT 3401
             CGSLL+ATVI+   Q+K    + G+   + +  FTC AC+T KGMETVAMPYVFRYLA 
Sbjct: 1102 LCGSLLSATVIKSDTQKKSKRHLLGVNTVRPAKNFTCQACQTNKGMETVAMPYVFRYLAA 1161

Query: 3402 ELAAMNIKMELKL 3440
            ELAAMNIK++L+L
Sbjct: 1162 ELAAMNIKLDLRL 1174


>gb|PNT67640.1| hypothetical protein BRADI_3g29917v3 [Brachypodium distachyon]
          Length = 1197

 Score = 1547 bits (4006), Expect = 0.0
 Identities = 765/1168 (65%), Positives = 933/1168 (79%), Gaps = 30/1168 (2%)
 Frame = +3

Query: 27   ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-RDAM 203
            AT+REL++PHIESFDYF+D+G++  + SIRP +I  P+++  LRI   +  LL P RD  
Sbjct: 21   ATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRDVR 80

Query: 204  SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 383
             ++ +YPQECR+AR +Y GE  V+T FQ+N+G  +R   +FG+LPIMLMSK CHLRGAD 
Sbjct: 81   MAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGADS 140

Query: 384  QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 563
            +KLI+H EEATEMGGYFI  G+ERL R+L+LQKRNYPMG+VR +F  RG GY+DKAV++R
Sbjct: 141  RKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVVIR 200

Query: 564  CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 743
            CV++DQ+SVTVKLYYLQNGSARLGFW+  RE LLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 201  CVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVLKALIDTSDREIFASLTCCYS 260

Query: 744  ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 923
            ++Y+R KGVV  QLIGERAQIIL+EVR LSL TR+ CL+HIG YF+ A+EGFE ++Y+ V
Sbjct: 261  DKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEHIGQYFRSAMEGFEKDDYQTV 320

Query: 924  ADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIAL 1103
            A+AVL+DYVLVHL +NH KFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPG+LI +
Sbjct: 321  AEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGYLITV 380

Query: 1104 YLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRLA 1283
            +LK+++ +WLRKS+R +++E TK  +F   +  +++KFL K S ++GR++ES++K+GR  
Sbjct: 381  FLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLCKHSTSVGRAIESLIKIGRAN 440

Query: 1284 TLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCPV 1463
            + + LDLPQ++GM+IQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCPV
Sbjct: 441  SQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAKMRTTTVRKLLPESWGFLCPV 500

Query: 1464 HTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHAG 1643
            HTPDGEPCGLLNHMTSAC ++S++++EG +KDF  I+  +   L+R GM PL PK+EH G
Sbjct: 501  HTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRLLAELVRGGMIPLSPKMEHTG 560

Query: 1644 PPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSVIPDDLEVGYVPLSFGGAYPGL 1823
            PPEVL V LDG +VGSI  +++E+ V +IRRLKL A    P+DLEVGYVPLS GGAYPGL
Sbjct: 561  PPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPATPEDLEVGYVPLSIGGAYPGL 620

Query: 1824 YLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHEEI 1994
            Y FTSP+RF+RPV+N+    D   +IELIG FEQAFMEIRC DGGDGGR+ SFPATHEEI
Sbjct: 621  YFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIRCPDGGDGGRKESFPATHEEI 680

Query: 1995 HPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSPI 2174
            HPT +LSVVANLTPWS+HNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQSPI
Sbjct: 681  HPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQSPI 740

Query: 2175 VRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESIDL 2354
            VRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG IY+TE IDL
Sbjct: 741  VRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECIDL 800

Query: 2355 AERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXXX 2531
            +  + + +  +IFA+S+  R ++S+IDSDGLP +G+ + P E YYSTY+           
Sbjct: 801  STTR-RGSVAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRPTRL 859

Query: 2532 XGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDIDM 2711
             G+EP  +D V V GT +K  +QKVNIR R  RNP+IGDKFSSRHGQKGVCSQLWPDIDM
Sbjct: 860  KGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDM 919

Query: 2712 PFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAK----------------AGSLLGEFK 2843
            PFSA TGMRPDLIINPHAFPSRMTI MLLESIAAK                AGSL G F 
Sbjct: 920  PFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKSLACLVLVVLTHYLFLAGSLHGNFV 979

Query: 2844 DATPFASSVES------ERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGP 3005
            DATPFASSV+       +  S VD++GP+LAS+GFNYHG EVLYSG +GTE+TCEIFIGP
Sbjct: 980  DATPFASSVKEGDGNPWKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGP 1039

Query: 3006 VYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXXEMERDSVLAHGAAYLLHD 3185
            VYYQRLRHMVSDKFQVR+TG +D +TRQP+            EMERD++LAHGA+YLLHD
Sbjct: 1040 VYYQRLRHMVSDKFQVRTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHD 1099

Query: 3186 RLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKG 3356
            RLHSCSDYHIA+VCS CGSLLTATVI+   Q K   ++ G+   K      C AC+T KG
Sbjct: 1100 RLHSCSDYHIADVCSLCGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQTNKG 1159

Query: 3357 METVAMPYVFRYLATELAAMNIKMELKL 3440
            METVAMPYVFRYLA ELAAMN+K++L+L
Sbjct: 1160 METVAMPYVFRYLAAELAAMNVKLDLRL 1187