BLASTX nr result
ID: Ophiopogon22_contig00001999
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00001999
(468 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus ... 197 2e-59
ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma fa... 197 4e-58
gb|KCW90557.1| hypothetical protein EUGRSUZ_A026652, partial [Eu... 179 7e-55
gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica gran... 186 2e-53
gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata] 184 6e-53
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,... 183 2e-52
ref|XP_007038959.1| PREDICTED: RNA polymerase sigma factor sigE,... 182 4e-52
gb|PON96872.1| RNA polymerase sigma factor [Trema orientalis] 182 4e-52
ref|XP_010097858.1| RNA polymerase sigma factor sigE, chloroplas... 182 5e-52
ref|XP_020099399.1| RNA polymerase sigma factor sigE, chloroplas... 176 6e-52
ref|XP_022738891.1| RNA polymerase sigma factor sigE, chloroplas... 181 7e-52
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 181 8e-52
ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplas... 181 2e-51
ref|XP_018723512.1| PREDICTED: RNA polymerase sigma factor sigE,... 179 2e-51
ref|XP_021293041.1| RNA polymerase sigma factor sigE, chloroplas... 179 4e-51
gb|PON50098.1| RNA polymerase sigma factor [Parasponia andersonii] 180 4e-51
ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,... 178 8e-51
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas... 178 1e-50
gb|OMO75948.1| RNA polymerase sigma-70 [Corchorus capsularis] 178 2e-50
gb|OMO56397.1| RNA polymerase sigma-70 [Corchorus olitorius] 178 2e-50
>gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus officinalis]
Length = 346
Score = 197 bits (500), Expect = 2e-59
Identities = 100/119 (84%), Positives = 103/119 (86%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
RVGISPERY DVM+ASK V+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA
Sbjct: 222 RVGISPERYHDVMRASKSVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDD 281
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD
Sbjct: 282 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 340
>ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Asparagus officinalis]
Length = 478
Score = 197 bits (500), Expect = 4e-58
Identities = 100/119 (84%), Positives = 103/119 (86%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
RVGISPERY DVM+ASK V+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA
Sbjct: 354 RVGISPERYHDVMRASKSVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDD 413
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD
Sbjct: 414 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 472
>gb|KCW90557.1| hypothetical protein EUGRSUZ_A026652, partial [Eucalyptus grandis]
gb|KCW90558.1| hypothetical protein EUGRSUZ_A026652, partial [Eucalyptus grandis]
Length = 164
Score = 179 bits (454), Expect = 7e-55
Identities = 89/119 (74%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +VM+AS+ V+SL+SRH VTQEEFI+ ITD+DG GGD RRQPA
Sbjct: 39 KVGISPERYHEVMRASRPVFSLHSRHSVTQEEFISGITDVDGAGGDSRRQPALLRLALDD 98
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 99 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 157
>gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica granatum]
gb|PKI72417.1| hypothetical protein CRG98_007163 [Punica granatum]
Length = 514
Score = 186 bits (471), Expect = 2e-53
Identities = 93/119 (78%), Positives = 101/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
RVG+SPERY +VM+ASK VYSL+SRH VTQEEFI+AITD+DGVGGD RRQPA
Sbjct: 389 RVGMSPERYHEVMRASKPVYSLHSRHAVTQEEFISAITDVDGVGGDNRRQPALLRLALDD 448
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 449 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 507
>gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]
Length = 513
Score = 184 bits (467), Expect = 6e-53
Identities = 91/119 (76%), Positives = 101/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +VM+ASK V+SL++RH+ TQEEFIN ITD+DGVGGDKRRQPA
Sbjct: 388 KVGISPERYHEVMRASKPVFSLHARHLTTQEEFINGITDVDGVGGDKRRQPALLRLALDD 447
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 448 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 506
>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nelumbo nucifera]
Length = 514
Score = 183 bits (464), Expect = 2e-52
Identities = 91/119 (76%), Positives = 100/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +V+KASK V+SL+SRH +TQEEFIN ITDI+GVGGDKRRQPA
Sbjct: 389 KVGISPERYHEVIKASKPVFSLHSRHAITQEEFINGITDIEGVGGDKRRQPALLRLALDD 448
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHP R+D
Sbjct: 449 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVD 507
>ref|XP_007038959.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Theobroma cacao]
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gb|EOY23461.1| Sigma factor E isoform 1 [Theobroma cacao]
Length = 516
Score = 182 bits (462), Expect = 4e-52
Identities = 93/119 (78%), Positives = 100/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY++VM+ASK V SL+SRH VTQEEFIN ITDIDGVGGD RRQPA
Sbjct: 391 KVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGVGGDHRRQPALLRLALDD 450
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 451 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 509
>gb|PON96872.1| RNA polymerase sigma factor [Trema orientalis]
Length = 539
Score = 182 bits (463), Expect = 4e-52
Identities = 92/119 (77%), Positives = 101/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY DVM+ASK VYSL+S+H VTQEEFINAITDI+GVGGD RR+PA
Sbjct: 414 KVGISPERYHDVMRASKPVYSLHSKHAVTQEEFINAITDIEGVGGDDRRKPALLRLALDD 473
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+E+KALMKLKHPAR+D
Sbjct: 474 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVD 532
>ref|XP_010097858.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Morus notabilis]
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 182 bits (461), Expect = 5e-52
Identities = 92/119 (77%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +VM+ASK V SLNSRHV TQEEFINAITD+DGV GD RR+PA
Sbjct: 392 KVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDD 451
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 452 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 510
>ref|XP_020099399.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
isoform X1 [Ananas comosus]
Length = 313
Score = 176 bits (447), Expect = 6e-52
Identities = 89/119 (74%), Positives = 95/119 (79%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
RVG+SPERY D++KASK V SLNSRH VTQEEFI ITDIDG+ GDKRR A
Sbjct: 189 RVGVSPERYNDIIKASKPVISLNSRHAVTQEEFIKGITDIDGISGDKRRHAALLRLALDD 248
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHELKALMKLKHP R+D
Sbjct: 249 VLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHELKALMKLKHPVRVD 307
>ref|XP_022738891.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Durio zibethinus]
Length = 513
Score = 181 bits (460), Expect = 7e-52
Identities = 92/119 (77%), Positives = 100/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY++VM+ASK V SL+SRH VTQEEFIN ITD+DGVGGD RRQPA
Sbjct: 388 KVGISPERYQEVMRASKPVGSLHSRHSVTQEEFINGITDVDGVGGDHRRQPALLRLAIDD 447
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 448 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 506
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Fragaria vesca subsp.
vesca]
Length = 520
Score = 181 bits (460), Expect = 8e-52
Identities = 91/119 (76%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +VM+ASK V+SLNSRH VTQEEFIN ITD+DGV GD RR+PA
Sbjct: 395 KVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDD 454
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 455 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 513
>ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
ref|XP_024176964.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
ref|XP_024176971.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
ref|XP_024176977.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
gb|PRQ60343.1| putative RNA polymerase sigma-70 like domain-containing protein
[Rosa chinensis]
Length = 519
Score = 181 bits (458), Expect = 2e-51
Identities = 91/119 (76%), Positives = 100/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +VM+ASK V+SL+SRH VTQEEFINAITD+DGV GD RR+PA
Sbjct: 394 KVGISPERYHEVMRASKPVFSLHSRHSVTQEEFINAITDVDGVEGDNRRKPALLRLAIDD 453
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 454 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 512
>ref|XP_018723512.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Eucalyptus grandis]
Length = 472
Score = 179 bits (454), Expect = 2e-51
Identities = 89/119 (74%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY +VM+AS+ V+SL+SRH VTQEEFI+ ITD+DG GGD RRQPA
Sbjct: 347 KVGISPERYHEVMRASRPVFSLHSRHSVTQEEFISGITDVDGAGGDSRRQPALLRLALDD 406
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 407 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 465
>ref|XP_021293041.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Herrania umbratica]
Length = 516
Score = 179 bits (455), Expect = 4e-51
Identities = 92/119 (77%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISP RY++VM+ASK V SL+SRH VTQEEFIN ITDIDGVGGD RRQPA
Sbjct: 391 KVGISPGRYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGVGGDHRRQPALLRLALDD 450
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 451 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 509
>gb|PON50098.1| RNA polymerase sigma factor [Parasponia andersonii]
Length = 536
Score = 180 bits (456), Expect = 4e-51
Identities = 90/119 (75%), Positives = 100/119 (84%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+V ISPERY DVM+ASK VYSL+S+H VTQEEFINAITD++GVGGD RR+PA
Sbjct: 411 KVSISPERYHDVMRASKPVYSLHSKHAVTQEEFINAITDVEGVGGDDRRKPALLRLALDD 470
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+E+KALMKLKHPAR+D
Sbjct: 471 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVD 529
>ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Elaeis guineensis]
ref|XP_010913942.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Elaeis guineensis]
Length = 498
Score = 178 bits (452), Expect = 8e-51
Identities = 91/119 (76%), Positives = 98/119 (82%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
RV ISPERY DVMKA+K ++SL++RH VTQEEFIN ITDIDGVGGDKRRQ A
Sbjct: 374 RVKISPERYYDVMKAAKPIFSLHARHAVTQEEFINGITDIDGVGGDKRRQRALLRLALDD 433
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNL+ISREMVRKHELKA MKLKHPAR+D
Sbjct: 434 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHELKAFMKLKHPARVD 492
>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
Length = 511
Score = 178 bits (452), Expect = 1e-50
Identities = 90/119 (75%), Positives = 98/119 (82%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
R+GISPERY DV+KASK + SL+SRH+VTQEEFIN ITD+DGV GD RRQ A
Sbjct: 386 RIGISPERYYDVLKASKPIISLHSRHIVTQEEFINGITDLDGVDGDNRRQLAVLRLALDD 445
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPARLD
Sbjct: 446 VLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARLD 504
>gb|OMO75948.1| RNA polymerase sigma-70 [Corchorus capsularis]
Length = 516
Score = 178 bits (451), Expect = 2e-50
Identities = 90/119 (75%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY++VM+ASK V SL+SRH VTQEE I+ ITD+DGVGGD RRQPA
Sbjct: 391 KVGISPERYQEVMRASKSVASLHSRHSVTQEELISGITDVDGVGGDHRRQPALLRLALDD 450
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 451 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 509
>gb|OMO56397.1| RNA polymerase sigma-70 [Corchorus olitorius]
Length = 516
Score = 178 bits (451), Expect = 2e-50
Identities = 90/119 (75%), Positives = 99/119 (83%)
Frame = +1
Query: 1 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 180
+VGISPERY++VM+ASK V SL+SRH VTQEE I+ ITD+DGVGGD RRQPA
Sbjct: 391 KVGISPERYQEVMRASKSVASLHSRHSVTQEELISGITDVDGVGGDHRRQPALLRLALDD 450
Query: 181 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 357
PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 451 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 509