BLASTX nr result

ID: Ophiopogon22_contig00001821 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00001821
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007162753.1| hypothetical protein PHAVU_001G177600g [Phas...    53   5e-07

>ref|XP_007162753.1| hypothetical protein PHAVU_001G177600g [Phaseolus vulgaris]
 gb|ESW34747.1| hypothetical protein PHAVU_001G177600g [Phaseolus vulgaris]
          Length = 50

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +1

Query: 151 MGFVVVISLPFIILVAILAAVCYMLGRAH-RRRTPLVYG 264
           MGFVVVISLP I+ + ILA VCYMLGRA  RR+ P  YG
Sbjct: 1   MGFVVVISLPLILFILILALVCYMLGRAKGRRQNPQQYG 39


Top