BLASTX nr result

ID: Ophiopogon22_contig00001649 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00001649
         (363 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251438.1| transcriptional regulator ATRX [Asparagus of...    57   5e-12
gb|ONK78864.1| uncharacterized protein A4U43_C01F360 [Asparagus ...    57   4e-07
gb|ONK75553.1| uncharacterized protein A4U43_C03F18100 [Asparagu...    46   3e-06

>ref|XP_020251438.1| transcriptional regulator ATRX [Asparagus officinalis]
          Length = 756

 Score = 57.4 bits (137), Expect(2) = 5e-12
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = -3

Query: 151 DDSRGFKIVHDKDIGKGKQSYSSD---SDISGRHGGRGKNHRDIPTRHDSRDD 2
           DD RG K V+D+   KGK  Y SD   SD SGRH GRGK+H  +PTRHD + D
Sbjct: 246 DDGRGIKTVNDR---KGKHIYGSDNYDSDNSGRHEGRGKSHGGVPTRHDFQGD 295



 Score = 40.8 bits (94), Expect(2) = 5e-12
 Identities = 22/55 (40%), Positives = 29/55 (52%)
 Frame = -2

Query: 362 PSEHEVQEREKXXXXXXXXXXXXXXXXDQHQKKGSKLHVTRTDDERENFKKEKQI 198
           PSE+EVQE+++                DQHQKK SK H T  D++ E+ KK   I
Sbjct: 170 PSENEVQEQKQETEASSFHIEEIDRQKDQHQKKDSKYHGTMNDEDEESLKKGNHI 224


>gb|ONK78864.1| uncharacterized protein A4U43_C01F360 [Asparagus officinalis]
          Length = 547

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = -3

Query: 151 DDSRGFKIVHDKDIGKGKQSYSSD---SDISGRHGGRGKNHRDIPTRHDSRDD 2
           DD RG K V+D+   KGK  Y SD   SD SGRH GRGK+H  +PTRHD + D
Sbjct: 37  DDGRGIKTVNDR---KGKHIYGSDNYDSDNSGRHEGRGKSHGGVPTRHDFQGD 86


>gb|ONK75553.1| uncharacterized protein A4U43_C03F18100 [Asparagus officinalis]
          Length = 160

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 26/53 (49%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -3

Query: 151 DDSRGFKIVHDKDIGKGKQSYSS---DSDISGRHGGRGKNHRDIPTRHDSRDD 2
           DD RG K + D+   KGK  Y S   DS  S RH GRG  H  +PT HD  DD
Sbjct: 96  DDGRGIKTIDDR---KGKHIYGSVSYDSANSVRHEGRGNYHGGVPTLHDFEDD 145



 Score = 32.3 bits (72), Expect(2) = 3e-06
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 278 QHQKKGSKLHVTRTDDERENFKKEKQI 198
           QHQKK SK H T  D++ E+ KK   I
Sbjct: 48  QHQKKDSKYHGTMNDEDEESLKKGNHI 74


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