BLASTX nr result
ID: Ophiopogon22_contig00000777
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon22_contig00000777 (1418 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar... 190 2e-49 gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 189 3e-49 gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 167 5e-42 gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 165 3e-40 gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo... 157 4e-40 gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 165 4e-40 gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo... 156 1e-39 gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo... 158 3e-39 emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 161 6e-39 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 161 8e-39 gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 158 1e-38 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 160 1e-38 gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 156 3e-37 gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 156 4e-37 gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 156 4e-37 dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 155 6e-37 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 155 6e-37 gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposo... 143 5e-36 emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 152 6e-36 gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 151 1e-35 >gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense] Length = 718 Score = 190 bits (482), Expect = 2e-49 Identities = 109/293 (37%), Positives = 167/293 (56%), Gaps = 2/293 (0%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF RM EG + HI++F +++N+L +EV I+DEDQA+LLLCSLPS+YKSF++ +IY Sbjct: 374 LFTFRMNEGELLKDHISQFITLLNDLKNVEVHIDDEDQAMLLLCSLPSSYKSFKETLIY- 432 Query: 182 GKESLKINEVREHLLNKDKIDKQL-TGSPNGGDSSALYAKEKKGKQRSSTNSEVKSCSFC 358 GK+ L +V+ HLL++DK+D + S +S L A +K+ K+ C +C Sbjct: 433 GKDKLSFEDVKGHLLSRDKLDNEFDLNSKADRQASVLVASKKREKR----------CRYC 482 Query: 359 KRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTDSLVSND 538 K+ GHV+ ++ D GD+ ++ S +D+ Sbjct: 483 KKLGHVK--------ADYYKLRNKRAAESNEEDVVGANLVDEGGDDFLLVSTSDN-SKLT 533 Query: 539 DDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLS 718 +WI+DSGCS H+ P E FSTY+SV+GG V MGN + +IG G V++R +DG++ TLS Sbjct: 534 SEWILDSGCSFHMYPNREWFSTYSSVEGGVVHMGNDSSSKIIGIGTVKIRIHDGTIKTLS 593 Query: 719 DVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVA-KKIGNIYR 874 DV +VP+ R N+ISL L G ES + +++ A + +K+G+ R Sbjct: 594 DVRYVPDLRKNLISLSILDLKGCRINIESSNIKVSRGALVLLKGFEKLGHCIR 646 >gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 690 Score = 189 bits (479), Expect = 3e-49 Identities = 102/303 (33%), Positives = 165/303 (54%), Gaps = 7/303 (2%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 L+ +RM EG P+ SH+ EF SII +L+ IE+KI+DED+A+LL+ SLPSTYK F++ ++Y Sbjct: 108 LYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYS 167 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAKEKKG-------KQRSSTNSEV 340 ++L +V+ +LL+K+K D + G S ++KG + +S Sbjct: 168 NNDTLSFEDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSKSRGRKSN 227 Query: 341 KSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTD 520 K+C +CK+ GH + D +V+ SV+ Sbjct: 228 KTCRYCKKFGH--------DISDCFILKKKQERQEKGKNPAEAANVETDSDGDVMISVSS 279 Query: 521 SLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDG 700 S +WI+DSGC+ H+ P + F+T V G V MGN +C + G G +Q++++DG Sbjct: 280 DKRSK-TEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDG 338 Query: 701 SMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRLE 880 ++ TLS+V +P+ + N+ISLG L S G Y +E L ++K A + A +IG++Y L+ Sbjct: 339 TIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQ 398 Query: 881 RSV 889 S+ Sbjct: 399 GSI 401 >gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 609 Score = 167 bits (424), Expect = 5e-42 Identities = 102/304 (33%), Positives = 158/304 (51%), Gaps = 9/304 (2%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF L M+E P+ H+ E SI+ EL I+VKIEDED A++LL SLP +Y+SF +++ G Sbjct: 42 LFGLHMKEDTPLQDHLDELNSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVG 101 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYA---------KEKKGKQRSSTNS 334 KE + + EV+ L +++ K S G + + L A K+++GK+++ N Sbjct: 102 -KECITMEEVKSSLHSRELWFKASANS-EGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNP 159 Query: 335 EVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSV 514 C++CK GH + D + E+V S+ Sbjct: 160 R-DICNYCKEPGHWKKDCPKKRNQKSVAVAAQE---------------DSSFENELVLSI 203 Query: 515 TDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSY 694 D+ + + W++DSGCS H+ P F TY GG VFMGN C IG G +Q++ + Sbjct: 204 VDNHQHSAEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMH 263 Query: 695 DGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYR 874 DG + TL++V HVP+ + N+IS+G LH+ GF E + I+K + + K GN+Y Sbjct: 264 DGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYM 323 Query: 875 LERS 886 L+ S Sbjct: 324 LQGS 327 >gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense] Length = 1841 Score = 165 bits (418), Expect = 3e-40 Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 9/286 (3%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 L+ L+M+EG PV+ H+ +F SII +L+ I+ KI+DEDQA+++LCSLP +Y++F D ++Y Sbjct: 631 LYALKMEEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMY- 689 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGS-PNGGDSSALYAK-EKKGKQRSSTNSEVKS--- 346 G++ L + EV+ + L+ ++ K++TG + L A+ K K SS+ S +S Sbjct: 690 GRDDLTLEEVK-NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSK 748 Query: 347 ----CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSV 514 C +CK+ GH++ AD D E+V +V Sbjct: 749 KRIQCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVAD--------ADSSSDAEIVLAV 800 Query: 515 TDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSY 694 +DS WI+D+G + HIS + FSTY G+V MGN C V+G G V+++ + Sbjct: 801 SDSYAGG--RWILDTGATFHISTSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMF 857 Query: 695 DGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDA 832 DG + TL+DV H+PE + N+ISL L GF Y +E L + A Sbjct: 858 DGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGA 903 >gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 364 Score = 157 bits (398), Expect = 4e-40 Identities = 94/262 (35%), Positives = 135/262 (51%), Gaps = 7/262 (2%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF L M+EG P+ H+ E S++ EL I+VKIEDED A++LL SLP +Y+SF +++ G Sbjct: 118 LFGLHMKEGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSVG 177 Query: 182 GKESLKINEV------REHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQRSSTNSEVK 343 KE + + EV RE L ++ GS +S K+KK K + TN K Sbjct: 178 -KECITMEEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPK 236 Query: 344 S-CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTD 520 C++CK GH + + + E+V S+ D Sbjct: 237 DICNYCKEPGHWKKDCPKKKGKPSAAVAKE----------------ESTSENELVLSIAD 280 Query: 521 SLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDG 700 ++D WI+DSGCS H+ P F TY GG VFMGN A C IG G ++++ +DG Sbjct: 281 QPQHSEDQWILDSGCSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDG 340 Query: 701 SMTTLSDVCHVPESRYNIISLG 766 TL++V HVPE + N+IS+G Sbjct: 341 ITRTLTEVRHVPELKKNLISVG 362 >gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense] Length = 2351 Score = 165 bits (418), Expect = 4e-40 Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 9/286 (3%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 L+ L+M+EG PV+ H+ +F SII +L+ I+ KI+DEDQA+++LCSLP +Y++F D ++Y Sbjct: 610 LYALKMEEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMY- 668 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGS-PNGGDSSALYAK-EKKGKQRSSTNSEVKS--- 346 G++ L + EV+ + L+ ++ K++TG + L A+ K K SS+ S +S Sbjct: 669 GRDDLTLEEVK-NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSK 727 Query: 347 ----CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSV 514 C +CK+ GH++ AD D E+V +V Sbjct: 728 KRIQCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVAD--------ADSSSDAEIVLAV 779 Query: 515 TDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSY 694 +DS WI+D+G + HIS + FSTY G+V MGN C V+G G V+++ + Sbjct: 780 SDSYAGG--RWILDTGATFHISTSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMF 836 Query: 695 DGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDA 832 DG + TL+DV H+PE + N+ISL L GF Y +E L + A Sbjct: 837 DGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAEGGVLKVFSGA 882 >gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] Length = 365 Score = 156 bits (395), Expect = 1e-39 Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 5/292 (1%) Frame = +2 Query: 17 MQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESL 196 M EGA + H+ F+ +I++L I VK+E+E++ALLLL SLP +Y I+YG K++L Sbjct: 1 MSEGANLLEHMNVFSKMISQLRSINVKLEEENEALLLLSSLPKSYDHLVTTILYG-KDTL 59 Query: 197 KINEVREHLLNKDKIDKQLTGSPNGGDSSALY--AKEKKGKQ---RSSTNSEVKSCSFCK 361 K+ EV LL+ + +KQ TG +S +K K G Q RS + C +CK Sbjct: 60 KVEEVNATLLSNEVRNKQSTGESLTVKTSQDRGRSKNKFGNQYRYRSISKENDNRCYYCK 119 Query: 362 RTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTDSLVSNDD 541 + GH + + L D E +C T S + + D Sbjct: 120 KEGHWKRDCPKKSKQQQQKKSGEEASV----------ASRLEKDSETLC--TFSCMDSSD 167 Query: 542 DWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTTLSD 721 WI+DS CS H+ P + FSTY+ GG V MGN++ C +G G ++++ +DG + TL++ Sbjct: 168 SWILDSDCSYHMCPFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTE 227 Query: 722 VCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRL 877 V HVP+ R +ISLG L ++G + + + K A + +KI ++YRL Sbjct: 228 VRHVPDLRKGLISLGTLDASGCTFIGSDGIIKVKKGAPVVMKGEKIESLYRL 279 >gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 507 Score = 158 bits (400), Expect = 3e-39 Identities = 100/296 (33%), Positives = 151/296 (51%), Gaps = 15/296 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF L M+E P+ H+ E SI+ EL I+VKIEDED A++LL SLP +Y+SF +++ G Sbjct: 15 LFGLHMKEDTPLQDHLDELNSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVG 74 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYA---------KEKKGKQRSSTNS 334 KE + + EV+ L +++ K S G + + L A K+++GK+++ N Sbjct: 75 -KECITMEEVKSSLHSRELWFKASANS-EGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNP 132 Query: 335 EVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSV 514 C++CK GH + D + E+V S+ Sbjct: 133 R-DICNYCKEPGHWKKDCPKKRNQKSVAVAAQE---------------DSSFENELVLSI 176 Query: 515 TDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSY 694 D+ + + W++DSGCS H+ P F TY GG VFMGN C IG G +Q++ + Sbjct: 177 VDNHQHSAEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMH 236 Query: 695 DGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRL------VITKDARISF 844 DG + TL++V HVP+ + N+IS+G LH+ GF E L V+ K RI F Sbjct: 237 DGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNVEVKELKFCEHCVVGKHHRIKF 292 >emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] Length = 1181 Score = 161 bits (408), Expect = 6e-39 Identities = 96/310 (30%), Positives = 152/310 (49%), Gaps = 17/310 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F I+ +L+ +EVK +++D AL+LLCSLPS+Y +FRD I+Y Sbjct: 106 LFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYS 165 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQ--------------- 316 +++L + EV + L K+K+ K + + + L + + ++ Sbjct: 166 -RDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYR 224 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 225 GRSKSRGRYKSCKYCKRDGH-DISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSD 283 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+D+ C+ H+ P + F+TY VQGG V MG+ C V G G Sbjct: 284 AELLVAYA-GCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 342 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TLSDV H+P + ++ISL L G+ Y L +TK + + A Sbjct: 343 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKAS 402 Query: 854 -KIGNIYRLE 880 K N+Y L+ Sbjct: 403 IKSANLYHLQ 412 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 161 bits (407), Expect = 8e-39 Identities = 95/303 (31%), Positives = 155/303 (51%), Gaps = 8/303 (2%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF LRM EG + H+ + +++ EL I+VKIEDED AL+LL SLP ++++F + I G Sbjct: 104 LFGLRMAEGTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVG 163 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQRSSTNSEVKS----- 346 K+++ + EVR L +++ + + G+ S L+ +KG++ ++ S Sbjct: 164 -KDTVSLEEVRSALHSRE-LRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKP 221 Query: 347 ---CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVT 517 C++CK GH + + EE + V Sbjct: 222 DDVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAV------------AEEDTNSEEDIALVA 269 Query: 518 DSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYD 697 D + D W++DSG S HI P+ E F+TY V GG++ M NS+ C V+G G++++R++D Sbjct: 270 DEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHD 329 Query: 698 GSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYRL 877 GS TL++V HVP N+ISL L S GF++ + L + K + + G +Y L Sbjct: 330 GSFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFL 389 Query: 878 ERS 886 + S Sbjct: 390 QGS 392 >gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 593 Score = 158 bits (399), Expect = 1e-38 Identities = 101/304 (33%), Positives = 153/304 (50%), Gaps = 9/304 (2%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF L M+E P+ H+ E SI+ EL I VKIEDED A++LL SLP +Y+SF +++ G Sbjct: 94 LFGLHMKEDTPLQDHLDELNSILMELRDINVKIEDEDAAMILLASLPPSYESFVNSLSVG 153 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYA---------KEKKGKQRSSTNS 334 KE + + EV+ L +++ K S G + + L A K+++GK+++ N Sbjct: 154 -KECITMEEVKSSLHSRELRFKASANS-EGVNGAGLLAFNSTTNGKKKKEQGKKKTKVNP 211 Query: 335 EVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSV 514 C++CK GH + D + E+V S+ Sbjct: 212 R-DICNYCKEPGHWKKDCPKKRNQKSVVVAAQE---------------DSSFENELVLSI 255 Query: 515 TDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSY 694 D+ + W++DSGCS H+ P F TY GG VFMGN C I G +Q++ + Sbjct: 256 VDNHQHFVEQWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMH 315 Query: 695 DGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAKKIGNIYR 874 DG + TL++V HVP+ + N+IS+G L + GF E + I K + I K GN+Y Sbjct: 316 DGVIRTLTEVRHVPDLKKNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYM 375 Query: 875 LERS 886 L+ S Sbjct: 376 LQGS 379 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 160 bits (405), Expect = 1e-38 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 17/309 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F I+ +L+ +EVK ++ED L+LLCSLPS+Y +FRD I+Y Sbjct: 15 LFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS 74 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQ--------------- 316 +++L + EV + L K+K+ K + + + L + ++ ++ Sbjct: 75 -RDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYR 133 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 134 GRSKSRGRYKSCKYCKRDGH-DISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSD 192 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+D+ C+ H+ P + F+TY +VQGG V MG+ C V G G Sbjct: 193 AELLVAYA-GCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIG 251 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TL DV H+P + ++ISL L G+ Y L +TK + + A Sbjct: 252 TVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKAD 311 Query: 854 -KIGNIYRL 877 K N+Y L Sbjct: 312 IKYANLYHL 320 >gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1138 Score = 156 bits (395), Expect = 3e-37 Identities = 93/304 (30%), Positives = 149/304 (49%), Gaps = 16/304 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F I+ +L+ +EVK ++ED L+LLCSLPS+Y +FRD I+Y Sbjct: 48 LFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILY- 106 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQ--------------- 316 +++L + EV + L K+K+ K + + + L + ++ K+ Sbjct: 107 SRDTLTLKEVYDALHTKEKMKKMVPSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYR 166 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 167 GRSKSRGRYKSCKYCKRDGH-DISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSD 225 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+D+ C+ H+ P + F+TY +VQGG V MG+ C V G G Sbjct: 226 AELLVAYA-GCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIG 284 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TLSDV H P + ++ISL L G+ Y S D ++ ++ V+ Sbjct: 285 IVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLDRKGYKY-SGGDGILKLILGNVAVVSD 343 Query: 854 KIGN 865 + N Sbjct: 344 SLSN 347 >gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1280 Score = 156 bits (394), Expect = 4e-37 Identities = 98/309 (31%), Positives = 149/309 (48%), Gaps = 17/309 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F I+ +L+ IEVK ++ED L+LLCSLPS+Y +FRD I+Y Sbjct: 141 LFLHKLQDDGSVMDHLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYS 200 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAK----EKKGKQ----------- 316 ++L + EV + L K+K+ K + + + L + EK K Sbjct: 201 -HDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYR 259 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 260 GRSKSRGRYKSCKYCKRDGH-DISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSD 318 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+D+ + H+ P + F+TY ++QGG V MG+ C V G G Sbjct: 319 TELLVAYA-GCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIG 377 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TLSDV H+P + ++ISL L G+ Y L +TK + + A Sbjct: 378 TVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKAD 437 Query: 854 -KIGNIYRL 877 K N+Y L Sbjct: 438 IKSANLYHL 446 >gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1312 Score = 156 bits (394), Expect = 4e-37 Identities = 98/309 (31%), Positives = 149/309 (48%), Gaps = 17/309 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F I+ +L+ IEVK ++ED L+LLCSLPS+Y +FRD I+Y Sbjct: 141 LFLHKLQDDGSVMDHLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYS 200 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYAK----EKKGKQ----------- 316 ++L + EV + L K+K+ K + + + L + EK K Sbjct: 201 -HDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYR 259 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 260 GRSKSRGRYKSCKYCKRDGH-DISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSD 318 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+D+ + H+ P + F+TY ++QGG V MG+ C V G G Sbjct: 319 TELLVAYA-GCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIG 377 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TLSDV H+P + ++ISL L G+ Y L +TK + + A Sbjct: 378 TVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKAD 437 Query: 854 -KIGNIYRL 877 K N+Y L Sbjct: 438 IKSANLYHL 446 >dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] Length = 1601 Score = 155 bits (393), Expect = 6e-37 Identities = 98/309 (31%), Positives = 149/309 (48%), Gaps = 17/309 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F II +L+ +EVK ++ED L+LLCSLPS+Y +FRD I+Y Sbjct: 106 LFLHKLQDDGSVMDHLSAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS 165 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYA----KEKKGKQ----------- 316 +++L + EV + L K+K+ K + + + L +EK K Sbjct: 166 -RDTLTLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYR 224 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 225 GRSKSRGRYKSCKYCKRDGH-DIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSD 283 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+++ C H+ P + F+TY +VQ G V MG+ C V G G Sbjct: 284 AELLVAYA-GCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIG 342 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TLSDV H+P + ++ISL L G+ Y L +TK + + A Sbjct: 343 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKAD 402 Query: 854 -KIGNIYRL 877 K N+Y L Sbjct: 403 IKSANLYHL 411 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 155 bits (393), Expect = 6e-37 Identities = 98/309 (31%), Positives = 149/309 (48%), Gaps = 17/309 (5%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LFL ++Q+ V H++ F II +L+ +EVK ++ED L+LLCSLPS+Y +FRD I+Y Sbjct: 313 LFLHKLQDDGSVMDHLSAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS 372 Query: 182 GKESLKINEVREHLLNKDKIDKQLTGSPNGGDSSALYA----KEKKGKQ----------- 316 +++L + EV + L K+K+ K + + + L +EK K Sbjct: 373 -RDTLTLKEVYDALHVKEKMKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYR 431 Query: 317 -RSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 493 RS + KSC +CKR GH V D D Sbjct: 432 GRSKSRGRYKSCKYCKRDGH-DIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSD 490 Query: 494 EEVVCSVTDSLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKG 673 E++ + D WI+++ C H+ P + F+TY +VQ G V MG+ C V G G Sbjct: 491 AELLVAYA-GCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIG 549 Query: 674 AVQLRSYDGSMTTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK 853 VQ++ +DG + TLSDV H+P + ++ISL L G+ Y L +TK + + A Sbjct: 550 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKAD 609 Query: 854 -KIGNIYRL 877 K N+Y L Sbjct: 610 IKSANLYHL 618 >gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 254 Score = 143 bits (361), Expect = 5e-36 Identities = 87/250 (34%), Positives = 126/250 (50%), Gaps = 7/250 (2%) Frame = +2 Query: 2 LFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYG 181 LF L M+EG P+ H+ E S++ EL I+VKIEDED A++LL SLP +Y+SF +++ Sbjct: 15 LFGLHMKEGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSV- 73 Query: 182 GKESLKINEV------REHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQRSSTNSEVK 343 GKE + + EV RE L ++ GS +S K+KK K + TN K Sbjct: 74 GKECITMEEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKHKSKRKTNVNPK 133 Query: 344 S-CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTD 520 C++CK GH + + + E+V S+ D Sbjct: 134 DICNYCKEPGHWKKDCPKKKGKPSIAVAK----------------EESTSENELVLSIAD 177 Query: 521 SLVSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDG 700 ++D WI+DSGCS H+ P F TY GG VFMGN A C IG G ++++ +DG Sbjct: 178 HPQHSEDQWILDSGCSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDG 237 Query: 701 SMTTLSDVCH 730 + TL++V H Sbjct: 238 IIRTLTEVRH 247 >emb|CAJ86151.1| H0413E07.4 [Oryza sativa] Length = 1205 Score = 152 bits (385), Expect = 6e-36 Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 17/299 (5%) Frame = +2 Query: 35 VNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLKINEVR 214 V H++ F I+ +L+ +EVK ++ED L+LLCSLPS+Y +FRD I+Y +++L + EV Sbjct: 102 VMDHLSVFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYS-RDTLTLKEVY 160 Query: 215 EHLLNKDKIDKQLTGSPNGGDSSALYAKEKKGKQ----------------RSSTNSEVKS 346 + L K+K+ K + + + L + + ++ RS + KS Sbjct: 161 DALHAKEKMKKMVPSEGSNSQAEGLVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKS 220 Query: 347 CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTDSL 526 C +CKR GH V D D E++ + Sbjct: 221 CKYCKRDGH-DISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYA-GC 278 Query: 527 VSNDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSM 706 D WI+D+ C+ H+ P + F+TY VQGG V MG+ C V G G VQ++ +DG + Sbjct: 279 AQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCI 338 Query: 707 TTLSDVCHVPESRYNIISLGALHSAGFAYRSESDRLVITKDARISFVAK-KIGNIYRLE 880 TLSDV H+P + ++ISL L G+ Y L +TK + + A K N+Y L+ Sbjct: 339 RTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQ 397 >gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] Length = 876 Score = 151 bits (382), Expect = 1e-35 Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 12/298 (4%) Frame = +2 Query: 20 QEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPSTYKSFRDAIIYGGKESLK 199 +EG+ + HI F +I+ +L ++ V+++DED+A++LLCSLP +Y + YG K+S+ Sbjct: 42 EEGSDLQQHINVFQNILTDLTRLRVQMDDEDKAIILLCSLPGSYDHLVTTLTYG-KDSIT 100 Query: 200 INEVREHLLNKDKIDKQLTGSPNG--------GDSSALYAKEKKGKQRS-STNSEVKSCS 352 + + LL+ + + G G D K GK+RS S N + C Sbjct: 101 LTSITSALLSHGQRRQNAEGGSQGEGLYVQGCSDRGRNKGKAGSGKKRSKSKNRKTSECY 160 Query: 353 FCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVVCSVTDSLVS 532 CK+ GH + H D + +++C + Sbjct: 161 SCKQIGHWKRDCPNIKQGSSTSANL-------------VHTDDSCSEGDILCVSSSKCT- 206 Query: 533 NDDDWIVDSGCSKHISPKAETFSTYTSVQGGAVFMGNSARCSVIGKGAVQLRSYDGSMTT 712 D WI+DSGCS H++P E F+T+ S G V++G+ C++ G G +++ DG + T Sbjct: 207 --DAWILDSGCSYHMTPNREWFTTFRSGSFGFVYLGDDKACAITGIGQIKIAMDDGGVRT 264 Query: 713 LSDVCHVPESRYNIISLGALHSAGFAYRSESDR--LVITKDA-RISFVAKKIGNIYRL 877 L++V ++PE R N+ISLG L G++YRS+ DR L ++K A + V + GNIY+L Sbjct: 265 LTNVRYIPELRKNLISLGTLQENGYSYRSDRDRDILKVSKGALTVMRVKRTAGNIYKL 322