BLASTX nr result

ID: Ophiopogon22_contig00000457 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00000457
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021821534.1| ATP synthase gamma chain, chloroplastic [Pru...    56   1e-06
ref|XP_008224833.1| PREDICTED: ATP synthase gamma chain, chlorop...    56   1e-06
ref|XP_007211447.1| ATP synthase gamma chain, chloroplastic [Pru...    56   1e-06
gb|PPD89003.1| hypothetical protein GOBAR_DD14050 [Gossypium bar...    54   6e-06
ref|XP_016683633.1| PREDICTED: ATP synthase gamma chain, chlorop...    54   6e-06
ref|XP_016753684.1| PREDICTED: ATP synthase gamma chain, chlorop...    54   6e-06
ref|XP_012449939.1| PREDICTED: ATP synthase gamma chain, chlorop...    54   6e-06

>ref|XP_021821534.1| ATP synthase gamma chain, chloroplastic [Prunus avium]
          Length = 376

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 35/73 (47%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       IHC LRELRE
Sbjct: 2   SCSNLTMWVSSKPALSDTSSLSCRSFIGPFQLPSQNSLPATPSRSSSVSPIHCGLRELRE 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


>ref|XP_008224833.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Prunus mume]
          Length = 376

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 35/73 (47%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       IHC LRELRE
Sbjct: 2   SCSNLTMWVSSKPALSDTSSLSCRSFISPFQLPSQNSLPASPSRSSSVSPIHCGLRELRE 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


>ref|XP_007211447.1| ATP synthase gamma chain, chloroplastic [Prunus persica]
 gb|ONI09959.1| hypothetical protein PRUPE_4G020800 [Prunus persica]
          Length = 376

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 35/73 (47%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       IHC LRELRE
Sbjct: 2   SCSNLTMWVSSKPALSDTSSLSCRSFISPFQLPSQNSLPASPSRSSSVSPIHCGLRELRE 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


>gb|PPD89003.1| hypothetical protein GOBAR_DD14050 [Gossypium barbadense]
 gb|PPS20009.1| hypothetical protein GOBAR_AA00564 [Gossypium barbadense]
          Length = 376

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 33/73 (45%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       +HC LRELR+
Sbjct: 2   SCSNLTMWVSSKPSLSDTSSLSFRSFISPFQLPSQSSTPGNPSRSSSVTPVHCGLRELRD 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


>ref|XP_016683633.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           hirsutum]
 ref|XP_016683634.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           hirsutum]
 ref|XP_016683635.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           hirsutum]
 ref|XP_016683636.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           hirsutum]
          Length = 376

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 33/73 (45%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       +HC LRELR+
Sbjct: 2   SCSNLTMWVSSKPSLSDTSSLSFRSFISPFQLPSQSSTPGNPSRSSSVTPVHCGLRELRD 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


>ref|XP_016753684.1| PREDICTED: ATP synthase gamma chain, chloroplastic-like [Gossypium
           hirsutum]
 ref|XP_017644897.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           arboreum]
 ref|XP_017644898.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           arboreum]
          Length = 376

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 33/73 (45%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       +HC LRELR+
Sbjct: 2   SCSNLTMWVSSKPSLSDTSSLSFRSFISPFQLPSQSSTPGNPSRSSSVTPVHCGLRELRD 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


>ref|XP_012449939.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           raimondii]
 ref|XP_012449940.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium
           raimondii]
 gb|KJB67182.1| hypothetical protein B456_010G180300 [Gossypium raimondii]
 gb|KJB67183.1| hypothetical protein B456_010G180300 [Gossypium raimondii]
          Length = 376

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 33/73 (45%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 112 SSANLTMWASS--------DLSSRSFIXXXXXXXXXXXXXXXXXXXXXXXIHCSLRELRE 267
           S +NLTMW SS         LS RSFI                       +HC LRELR+
Sbjct: 2   SCSNLTMWVSSKPSLSDTSSLSFRSFISPFQLPSQSSTPGNPSRSSSVTPVHCGLRELRD 61

Query: 268 RISSVKNTQKITE 306
           RI SVKNTQKITE
Sbjct: 62  RIDSVKNTQKITE 74


Top