BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00000114
         (1224 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   305   1e-93
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]   293   7e-89
gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar...   270   6e-80
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   273   7e-78
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   273   7e-78
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   264   4e-75
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...   244   3e-71
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...   243   4e-71
gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]       234   4e-66
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...   222   2e-65
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...   230   3e-63
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]   213   4e-62
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]                        225   2e-61
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   225   2e-61
gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposo...   211   3e-61
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   224   4e-61
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   224   5e-61
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        223   6e-61
gb|KYP36396.1| Retrovirus-related Pol polyprotein from transposo...   212   4e-60
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]       221   5e-60

>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  305 bits (780), Expect = 1e-93
 Identities = 162/363 (44%), Positives = 226/363 (62%), Gaps = 9/363 (2%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E+DEKAL+AIQLCLS EVL E + ETTAAALW +L+  Y+ KSLAN+L LK+RL+ +RM 
Sbjct: 55   ELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMV 114

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            EGTPI+SH+ EF SII +L+ +E K++DED+A+LL+ SLPS+YK F++ ++Y   +T+  
Sbjct: 115  EGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSF 174

Query: 363  SEVKEHLLNKDKIDSQLTGEHLQDGSSSGLIAREKNSNGGSAGNPKFK--------NYIC 518
             +VK +LL+K+K D  +   H +D    GL  R +    GS  N K +        N  C
Sbjct: 175  EDVKSNLLSKEKFDLDI---HSED-KGEGLSVRGRTQEKGSTSNKKSRSKSRGRKSNKTC 230

Query: 519  NWCHRKGHIKADCKAWKKSQS-NSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIID 695
             +C + GH  +DC   KK Q    K    A    +E +   DV+    S    K  WI+D
Sbjct: 231  RYCKKFGHDISDCFILKKKQERQEKGKNPAEAANVETDSDGDVMISVSSDKRSKTEWILD 290

Query: 696  SGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVP 875
            SGC+ H+C  K++F+T   V  GVV MGN + CK+ G GT+Q + HDG++ TL  V  +P
Sbjct: 291  SGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIP 350

Query: 876  RSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGSMVTGGRKQFS 1055
              + NLISLGTL   G ++ +E G + VSKGA V      +G++Y+LQGS+VTG     S
Sbjct: 351  DLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSS 410

Query: 1056 STS 1064
            S S
Sbjct: 411  SMS 413


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score =  293 bits (749), Expect = 7e-89
 Identities = 151/352 (42%), Positives = 223/352 (63%), Gaps = 11/352 (3%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E DEKAL+ IQLCLS EVL E   E TAA +W++L+  Y+ KSLAN+L LK+RLF LRM 
Sbjct: 53   ETDEKALSTIQLCLSREVLREVINEKTAAGIWSKLESLYMTKSLANKLRLKERLFTLRMS 112

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            EGTPI+SH+ EF SII +L+ ++ +++DED+A+LL+ SLP SY+ F++ ++YG   T+  
Sbjct: 113  EGTPIQSHLGEFNSIIIDLENLDVEIDDEDKAVLLIVSLPPSYRHFKEIMLYGNNVTLSF 172

Query: 363  SEVKEHLLNKDKIDSQLTGEHLQDGSSSGLIAREKNSNGGSAGNPKFK-----NYICNWC 527
             +VK +LL+K+K D+Q+  E     S  GL+ R +N   G++G  + K     +  C +C
Sbjct: 173  DDVKSNLLSKEKFDTQIHSE----SSGEGLVVRGRNHEVGASGKNQSKSKGKNSKYCRYC 228

Query: 528  HRKGHIKADCKAWKKSQSNS------KQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWI 689
             ++ H  ++C   K  Q+        +++  A+ +  E +  C + S T+     K  W+
Sbjct: 229  KKRNHEISECYKLKNKQNREDKGKQPEKSAEASFVETESDGECFIASGTEQR--SKNEWV 286

Query: 690  IDSGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSH 869
            +DSGC+ H+  +++ F+TY S  GG+V MGN + CKVVGKGT++ + HDG V TL  V H
Sbjct: 287  LDSGCTFHMSPNRDWFTTYESFNGGLVLMGNDAQCKVVGKGTIKIKTHDGVVRTLTSVRH 346

Query: 870  VPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGS 1025
            VP  + NLISLGTL   G  + +E G + VSKGA V       G++Y+LQGS
Sbjct: 347  VPDLKRNLISLGTLESQGCRYSAEGGVLKVSKGALVLLKAIRSGSLYLLQGS 398


>gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense]
          Length = 718

 Score =  270 bits (689), Expect = 6e-80
 Identities = 147/327 (44%), Positives = 207/327 (63%), Gaps = 2/327 (0%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E+DEKAL+AIQLCL++ VL +   E T+ ALW RL+  Y  KSLANRL+LKQRLF  RM 
Sbjct: 321  ELDEKALSAIQLCLTNTVLQDVLMEKTSFALWKRLETLYATKSLANRLVLKQRLFTFRMN 380

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            EG  +K HI++F +++N+L  VE  ++DEDQA+LLLCSLPSSYKSF++ +IY GK+ +  
Sbjct: 381  EGELLKDHISQFITLLNDLKNVEVHIDDEDQAMLLLCSLPSSYKSFKETLIY-GKDKLSF 439

Query: 363  SEVKEHLLNKDKIDSQLTGEHLQDGSSSGLIAREKNSNGGSAGNPKFKNYICNWCHRKGH 542
             +VK HLL++DK+D++       D  +S L+A +K                C +C + GH
Sbjct: 440  EDVKGHLLSRDKLDNEFDLNSKADRQASVLVASKKREKR------------CRYCKKLGH 487

Query: 543  IKADCKAW--KKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSGCSQHV 716
            +KAD      K++  +++++    NL  E  D   ++S +D+       WI+DSGCS H+
Sbjct: 488  VKADYYKLRNKRAAESNEEDVVGANLVDEGGDDFLLVSTSDNSKLTS-EWILDSGCSFHM 546

Query: 717  CTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRSRYNLI 896
              ++E FSTY+SV GGVV MGN S+ K++G GTV+ R HDG++ TL  V +VP  R NLI
Sbjct: 547  YPNREWFSTYSSVEGGVVHMGNDSSSKIIGIGTVKIRIHDGTIKTLSDVRYVPDLRKNLI 606

Query: 897  SLGTLHRDGFEFRSEDGAMLVSKGARV 977
            SL  L   G     E   + VS+GA V
Sbjct: 607  SLSILDLKGCRINIESSNIKVSRGALV 633


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  273 bits (697), Expect = 7e-78
 Identities = 153/354 (43%), Positives = 224/354 (63%), Gaps = 9/354 (2%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            +M E+A +AI LCL DEVL E + E TA+ LW RL+  Y+ KSL NRL LKQRL+ L+M+
Sbjct: 578  DMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKME 637

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            EGTP+  H+ +F SII +L+ ++ K++DEDQA+++LCSLP SY++F D ++Y G++ + +
Sbjct: 638  EGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMY-GRDDLTL 696

Query: 363  SEVKEHLLNKDKIDSQLTGEHLQDGSSSGLIAREKN-SNGGSAG-----NPKFKNYICNW 524
             EVK + L+  ++  ++TG+ +++    GL+AR ++ + GGS+      +   K   C +
Sbjct: 697  EEVK-NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYY 755

Query: 525  CHRKGHIKADC-KAWKKSQSNSKQNGAATNLAIED--EDACDVLSVTDSMVGDKRRWIID 695
            C + GH+K DC K  +KS+S  +QN  A N+A  D   DA  VL+V+DS  G   RWI+D
Sbjct: 756  CKKYGHMKVDCPKRKEKSESQEQQNDRA-NVADADSSSDAEIVLAVSDSYAGG--RWILD 812

Query: 696  SGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVP 875
            +G + H+ T K+ FSTY     G V MGN   C+V+G GTV+ +  DG V TL  V H+P
Sbjct: 813  TGATFHISTSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIP 871

Query: 876  RSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGSMVTG 1037
              + NLISL TL + GF + +E G + V  GA       L   +Y L GS VTG
Sbjct: 872  EMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTG 925


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  273 bits (697), Expect = 7e-78
 Identities = 153/354 (43%), Positives = 224/354 (63%), Gaps = 9/354 (2%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            +M E+A +AI LCL DEVL E + E TA+ LW RL+  Y+ KSL NRL LKQRL+ L+M+
Sbjct: 557  DMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKME 616

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            EGTP+  H+ +F SII +L+ ++ K++DEDQA+++LCSLP SY++F D ++Y G++ + +
Sbjct: 617  EGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMY-GRDDLTL 675

Query: 363  SEVKEHLLNKDKIDSQLTGEHLQDGSSSGLIAREKN-SNGGSAG-----NPKFKNYICNW 524
             EVK + L+  ++  ++TG+ +++    GL+AR ++ + GGS+      +   K   C +
Sbjct: 676  EEVK-NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYY 734

Query: 525  CHRKGHIKADC-KAWKKSQSNSKQNGAATNLAIED--EDACDVLSVTDSMVGDKRRWIID 695
            C + GH+K DC K  +KS+S  +QN  A N+A  D   DA  VL+V+DS  G   RWI+D
Sbjct: 735  CKKYGHMKVDCPKRKEKSESQEQQNDRA-NVADADSSSDAEIVLAVSDSYAGG--RWILD 791

Query: 696  SGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVP 875
            +G + H+ T K+ FSTY     G V MGN   C+V+G GTV+ +  DG V TL  V H+P
Sbjct: 792  TGATFHISTSKDAFSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIP 850

Query: 876  RSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGSMVTG 1037
              + NLISL TL + GF + +E G + V  GA       L   +Y L GS VTG
Sbjct: 851  EMKKNLISLSTLDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTG 904


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  264 bits (675), Expect = 4e-75
 Identities = 148/362 (40%), Positives = 210/362 (58%), Gaps = 11/362 (3%)
 Frame = +3

Query: 6    MDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQE 185
            ++EKA + I LCL+D+V+ E S E TAA LW +L+  Y+ KSL N+L+LKQRLF LRM E
Sbjct: 52   LEEKAHSTIMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAE 111

Query: 186  GTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKIS 365
            GT ++ H+ +  +++ EL  ++ K+EDED AL+LL SLP S+++F  + I G K+T+ + 
Sbjct: 112  GTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVG-KDTVSLE 170

Query: 366  EVKEHLLNKDKIDSQLTGEHLQDGSS-----SGLI--AREKNSNGGSAGNPKFKNY---- 512
            EV+  L +++         H  +G+S     SGL   +R+   NGG    P  K      
Sbjct: 171  EVRSALHSREL-------RHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDD 223

Query: 513  ICNWCHRKGHIKADCKAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWII 692
            +CN+C  KGH K DC   KK + + KQ+ +A     +     D+  V D        W++
Sbjct: 224  VCNYCKEKGHWKFDCP--KKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVL 281

Query: 693  DSGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHV 872
            DSG S H+C  +E F+TY  V GG + M NSS CKVVG G+++ R HDGS  TL+ V HV
Sbjct: 282  DSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHV 341

Query: 873  PRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGSMVTGGRKQF 1052
            P    NLISL  L   GF +  +DG + V KG+ +     + G +Y LQGS VTG     
Sbjct: 342  PLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVA 401

Query: 1053 SS 1058
            SS
Sbjct: 402  SS 403


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 609

 Score =  244 bits (623), Expect = 3e-71
 Identities = 140/334 (41%), Positives = 194/334 (58%), Gaps = 6/334 (1%)
 Frame = +3

Query: 42   LSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEGTPIKSHIAEFT 221
            LSDEVL E + + TA+ LW +L+  Y+ KS+ N+L+LK+RLF L M+E TP++ H+ E  
Sbjct: 2    LSDEVLYEVANQETASGLWLKLEKLYMTKSICNKLLLKRRLFGLHMKEDTPLQDHLDELN 61

Query: 222  SIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISEVKEHLLNKDKI 401
            SI+ EL  ++ K+EDED A++LL SLP SY+SF +++  G KE I + EVK  L +++  
Sbjct: 62   SILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVG-KECITMEEVKSSLHSRELW 120

Query: 402  DSQLTGEHLQDGSSSGLIAREKNSNGGSA---GNPKFK---NYICNWCHRKGHIKADCKA 563
                      +G+  GL+A     NG      G  K K     ICN+C   GH K DC  
Sbjct: 121  FKASANSEGVNGA--GLLAFNSTKNGKKKKEQGKKKTKVNPRDICNYCKEPGHWKKDCP- 177

Query: 564  WKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSGCSQHVCTDKEMFST 743
             KK    S    A  + + E+E    VLS+ D+      +W++DSGCS H+C ++  F T
Sbjct: 178  -KKRNQKSVAVAAQEDSSFENEL---VLSIVDNHQHSAEQWVLDSGCSYHMCPNRSWFLT 233

Query: 744  YTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRSRYNLISLGTLHRDG 923
            Y    GG VFMGN   CK +G GT+Q + HDG + TL  V HVP  + NLIS+G LH  G
Sbjct: 234  YEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKG 293

Query: 924  FEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGS 1025
            F+   E G M +SKG+ V       GN+Y+LQGS
Sbjct: 294  FKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQGS 327


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 593

 Score =  243 bits (621), Expect = 4e-71
 Identities = 142/348 (40%), Positives = 203/348 (58%), Gaps = 7/348 (2%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E +EKA + I L LSDEVL E + + TA+ LW +L+  Y+ KS+ N+L+LK+RLF L M+
Sbjct: 41   EQEEKAHSLILLSLSDEVLYEVADQETASGLWLKLEKLYMTKSICNKLLLKRRLFGLHMK 100

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            E TP++ H+ E  SI+ EL  +  K+EDED A++LL SLP SY+SF +++  G KE I +
Sbjct: 101  EDTPLQDHLDELNSILMELRDINVKIEDEDAAMILLASLPPSYESFVNSLSVG-KECITM 159

Query: 363  SEVKEHLLNKD-KIDSQLTGEHLQDGSSSGLIAREKNSNGGSA---GNPKFK---NYICN 521
             EVK  L +++ +  +    E +   + +GL+A    +NG      G  K K     ICN
Sbjct: 160  EEVKSSLHSRELRFKASANSEGV---NGAGLLAFNSTTNGKKKKEQGKKKTKVNPRDICN 216

Query: 522  WCHRKGHIKADCKAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSG 701
            +C   GH K DC   KK    S    A  + + E+E    VLS+ D+      +W++DSG
Sbjct: 217  YCKEPGHWKKDCP--KKRNQKSVVVAAQEDSSFENEL---VLSIVDNHQHFVEQWVLDSG 271

Query: 702  CSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRS 881
            CS H+C ++  F TY    GG VFMGN   CK +  GT+Q + HDG + TL  V HVP  
Sbjct: 272  CSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDL 331

Query: 882  RYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGS 1025
            + NLIS+G L   GF+   E G M ++KG+ +       GN+Y+LQGS
Sbjct: 332  KKNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYMLQGS 379


>gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 785

 Score =  234 bits (597), Expect = 4e-66
 Identities = 143/368 (38%), Positives = 209/368 (56%), Gaps = 23/368 (6%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E++ KA +AI L LS+EVL E   E   A+LW  L D Y+KKSLANRL  KQRL+  +M 
Sbjct: 30   EINSKAHSAILLSLSNEVLREVVAEKDTASLWKALDDKYMKKSLANRLFQKQRLYTFKMV 89

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            E TPIK H+  F  II +L  V  K+EDED AL+LL SLP S+++FRD ++Y G++TI +
Sbjct: 90   ENTPIKDHLDSFNRIILDLGGVRVKIEDEDLALILLFSLPRSFQNFRDTMLY-GRDTIAL 148

Query: 363  SEVKEHLLNKD---KIDSQLTGEHLQDGSSSGLIAREKNSNGGSAGNPKFKN-------- 509
             +VK+ LL+K+   K+ + + GE       +GLI     +   S+G  +F++        
Sbjct: 149  KDVKDALLSKELQNKVSADVDGE-------AGLIVTRGRNKEKSSGTTRFRSRSKSRVSR 201

Query: 510  YICNWCHRKGHIKADCKAWKKSQSNSK------------QNGAATNLAIEDEDACDVLSV 653
              C +C+ KGH++ DC   KK  S+ K            Q G++     +DE   DVL+V
Sbjct: 202  LRCFYCNEKGHLRKDCPDRKKGNSSEKMESNVKAMVAIVQEGSSLVETSDDEVGTDVLTV 261

Query: 654  TDSMVGDKRRWIIDSGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAH 833
              S  G    W++D+  S H+   + +F+T+    G V+ +G+ +T  V G G+VQ + H
Sbjct: 262  --STTGSANTWVLDTSASYHMTFSRNLFTTFKEWNGSVM-LGDKTTLTVKGSGSVQIKTH 318

Query: 834  DGSVTTLHGVSHVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYV 1013
            DG++ T      VP  R NLISLGTL + G+++  E+G + VSKGA      KL   +Y 
Sbjct: 319  DGTIRTFDAWL-VPELR-NLISLGTLDKQGYKYSGENGQIKVSKGAMTILKGKLQHGIYT 376

Query: 1014 LQGSMVTG 1037
            L G+ V G
Sbjct: 377  LIGNSVIG 384


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  222 bits (566), Expect = 2e-65
 Identities = 128/308 (41%), Positives = 180/308 (58%), Gaps = 7/308 (2%)
 Frame = +3

Query: 3   EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
           E +EKA + I L LSDEVL E + E TA+ LW +L+  Y+ KS+ N+L+LK+RLF L M+
Sbjct: 65  EQEEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMK 124

Query: 183 EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
           EGTP+K H+ E  S++ EL  ++ K+EDED A++LL SLP SY+SF +++   GKE I +
Sbjct: 125 EGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSV-GKECITM 183

Query: 363 SEVKEHLLNKDKIDSQLTGEHLQDGSS-----SGLIAREKNSNGGSAGNPKFKNYICNWC 527
            EVK  L +++            +GSS     SG   ++K        N   K+ ICN+C
Sbjct: 184 EEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKD-ICNYC 242

Query: 528 HRKGHIKADC--KAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSG 701
              GH K DC  K  K S + +K+   + N          VLS+ D     + +WI+DSG
Sbjct: 243 KEPGHWKKDCPKKKGKPSAAVAKEESTSENEL--------VLSIADQPQHSEDQWILDSG 294

Query: 702 CSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRS 881
           CS H+C ++  F TY    GG VFMGN + CK +G GT++ + HDG   TL  V HVP  
Sbjct: 295 CSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGITRTLTEVRHVPEL 354

Query: 882 RYNLISLG 905
           + NLIS+G
Sbjct: 355 KKNLISVG 362


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score =  230 bits (587), Expect = 3e-63
 Identities = 132/352 (37%), Positives = 195/352 (55%), Gaps = 7/352 (1%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E D KA +AI LCL DEVL E ++E +A +LW +L+  YLK+SLANRL LK+ L+ + ++
Sbjct: 53   ETDSKAFSAILLCLGDEVLREVAEEVSALSLWNKLESLYLKRSLANRLYLKKSLYTIHLE 112

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            EG  +K H+ EF  II +L  V+ K+ DED A+L+L SLP SY+ F D ++Y GKET+ +
Sbjct: 113  EGKDLKKHMDEFNKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLY-GKETLTM 171

Query: 363  SEVKE-------HLLNKDKIDSQLTGEHLQDGSSSGLIAREKNSNGGSAGNPKFKNYICN 521
            +EVK        H  N+ K++S   G +++  +       EK     S    + K   C 
Sbjct: 172  AEVKSALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGK-LKCF 230

Query: 522  WCHRKGHIKADCKAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSG 701
             CH++GH K DC   +      +++     +  +  ++ +VL V  S    +  W++DSG
Sbjct: 231  VCHKEGHFKKDCPDRRARNPERRKDPGDAAVVSDGYESAEVLVV--SRTNKQDCWVMDSG 288

Query: 702  CSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRS 881
            CS H+C  K  F        G V +GN+  CKV+G G+V  + HDG V T+  V +VP  
Sbjct: 289  CSFHMCPIKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPDL 348

Query: 882  RYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGSMVTG 1037
            R NL+S+G L   GF  + E G M V KG+           +Y+L+ S VTG
Sbjct: 349  RRNLLSIGMLDSKGFNVKIEGGTMKVIKGSLTVMRGSQDNGLYILEASTVTG 400


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score =  213 bits (542), Expect = 4e-62
 Identities = 129/338 (38%), Positives = 184/338 (54%), Gaps = 5/338 (1%)
 Frame = +3

Query: 12   EKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEGT 191
            EKA  AI LCL ++VL E ++E   A LW +L+  ++ KSL NRL LK+RL  L+M+E  
Sbjct: 11   EKAHRAILLCLGNKVLREIAEEDITAKLWLKLESLHMTKSLKNRLYLKKRLHTLQMKESM 70

Query: 192  PIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISEV 371
             IK H  EF   I +L  ++ KV  EDQA+ L+CSLP+SY+ F D ++Y G+ T+ I +V
Sbjct: 71   SIKDHFNEFNKTIXDLRNIDVKVNYEDQAIFLMCSLPNSYEHFVDIMMY-GRGTLFIKDV 129

Query: 372  KEHLLNKDKIDSQLTGEHLQDGSSSGLIA--REKNSNGGSAGNPKFK---NYICNWCHRK 536
            +   LN  ++   +      D S  GL+A  R +  N G  G  + K   N  C  C ++
Sbjct: 130  RV-ALNSRELKKMVFKSRKYD-SGEGLVARGRTRKKNNGRRGRSRSKSRGNNKCFKCKKE 187

Query: 537  GHIKADCKAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSGCSQHV 716
            GH   +    K  ++    N      A E+ +  DVL V  +   D+  WI+DSGCS H+
Sbjct: 188  GHYVKNXPDRKGKENKRNYNSGDATFAKENSNTTDVLLVXVTNSDDE--WILDSGCSYHM 245

Query: 717  CTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRSRYNLI 896
              + + FSTY  + GG V MGN   CKVVG   +Q + H G + TL  V HVP+   NLI
Sbjct: 246  SPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVPKLNKNLI 305

Query: 897  SLGTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVY 1010
             L TL  +G  +++  G + VSKG  V    K +  +Y
Sbjct: 306  FLRTLDSNGCIYKAGGGVLRVSKGGLVVMNGKKINGLY 343


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
          Length = 1335

 Score =  225 bits (574), Expect = 2e-61
 Identities = 133/358 (37%), Positives = 199/358 (55%), Gaps = 15/358 (4%)
 Frame = +3

Query: 9    DEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEG 188
            D+KAL  IQL L +++L E   E T+A LW +L+   + K L +++ +K +LF L+M+E 
Sbjct: 55   DQKALALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 114

Query: 189  TPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISE 368
              + +HIAEF  I+ +L  +E K +DED  LLLLCSLP+SY +FRD I+   ++ + + E
Sbjct: 115  DSVITHIAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILL-SRDELTLKE 173

Query: 369  VKEHLLNKDKI--------DSQLTGEHLQ-DGSSSGLIAREKN--SNGGSAGNPKFKNYI 515
            V + L NK+K+         S   GE L   G +    + EKN    G S   P      
Sbjct: 174  VYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENKTSNEKNYDRRGRSKSKPPGNKKF 233

Query: 516  CNWCHRKGHIKADCKAWKKSQSNSKQNG--AATNLAIEDEDACDVLSVTDSMVGDKRRWI 689
            C +C  K H   +CK  +  +  +K++G  +  + A+ D+D+ D L V    V     WI
Sbjct: 234  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAVSDDDSGDCLVVFAGCVAGHDEWI 293

Query: 690  IDSGCSQHVCTDKEMFSTYTSV-RGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVS 866
            +DS CS H+CT +  FS+Y  V +G VV MG+ + C +VG G+VQ +  DG   TL  V 
Sbjct: 294  LDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 353

Query: 867  HVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKL-VGNVYVLQGSMVTG 1037
            ++P    NLISL TL  +G+++   DG + VSKG+ V     L    +YVL+G  + G
Sbjct: 354  YIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLPG 411


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  225 bits (573), Expect = 2e-61
 Identities = 133/358 (37%), Positives = 199/358 (55%), Gaps = 15/358 (4%)
 Frame = +3

Query: 9    DEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEG 188
            D+KAL  IQL L +++L E   E T+A LW +L+   + K L +++ +K +LF L+M+E 
Sbjct: 53   DQKALALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 112

Query: 189  TPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISE 368
              + +H+AEF  I+ +L  +E K +DED  LLLLCSLP+SY +FRD I+   ++ + + E
Sbjct: 113  DSVITHMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILL-SRDELTLKE 171

Query: 369  VKEHLLNKDKI--------DSQLTGEHLQ-DGSSSGLIAREKN--SNGGSAGNPKFKNYI 515
            V + L NK+K+         S   GE L   G +    + EKN    G S   P      
Sbjct: 172  VYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF 231

Query: 516  CNWCHRKGHIKADCKAWKKSQSNSKQNG--AATNLAIEDEDACDVLSVTDSMVGDKRRWI 689
            C +C  K H   +CK  +  +  +K++G  +  + A  D+D+ D L V    V     WI
Sbjct: 232  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWI 291

Query: 690  IDSGCSQHVCTDKEMFSTYTSV-RGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVS 866
            +DS CS H+CT +  FS+Y  V +G VV MG+ + C +VG G+VQ +  DG   TL  V 
Sbjct: 292  LDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 351

Query: 867  HVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKL-VGNVYVLQGSMVTG 1037
            ++P    NLISL TL  +G+++   DG + VSKG+ V     L    +YVL+G  +TG
Sbjct: 352  YIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTG 409


>gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score =  211 bits (537), Expect = 3e-61
 Identities = 122/298 (40%), Positives = 172/298 (57%), Gaps = 7/298 (2%)
 Frame = +3

Query: 3   EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
           E +EKA + I L LSDEVL E + E TA+ LW +L+  Y+ KS+ N+L+LK+RLF L M+
Sbjct: 65  EQEEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMK 124

Query: 183 EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
           EGTP+K H+ E  S++ EL  ++ K+EDED A++LL  LP SY+SF +++   GKE I +
Sbjct: 125 EGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLAYLPPSYESFVNSLSV-GKECITM 183

Query: 363 SEVKEHLLNKDKIDSQLTGEHLQDGSS-----SGLIAREKNSNGGSAGNPKFKNYICNWC 527
            EVK  L +++            +GSS     SG   ++K        N   K+ ICN+C
Sbjct: 184 EEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKD-ICNYC 242

Query: 528 HRKGHIKADC--KAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSG 701
              GH K DC  K  K S + +K+   + N          VLS+ D     + +WI+DSG
Sbjct: 243 KEPGHWKKDCPKKKGKPSAAVAKEESTSENEL--------VLSIADQPQHSEDQWILDSG 294

Query: 702 CSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVP 875
           CS H+C ++  F TY    GG VFMGN + CK +G GT++ + HDG   TL  V HVP
Sbjct: 295 CSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGITRTLTKVRHVP 352


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  224 bits (571), Expect = 4e-61
 Identities = 133/358 (37%), Positives = 199/358 (55%), Gaps = 15/358 (4%)
 Frame = +3

Query: 9    DEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEG 188
            D+KAL  IQL L +++L E   E T+A LW +L+   + K L +++ +K +LF L+M+E 
Sbjct: 53   DQKALALIQLHLHNDILQECLIEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 112

Query: 189  TPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISE 368
              + +H+AEF  I+ +L  +E K +DED  LLLLCSLP+SY +FRD I+   ++ + + E
Sbjct: 113  DSVITHMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILL-SRDELTLKE 171

Query: 369  VKEHLLNKDKI--------DSQLTGEHLQ-DGSSSGLIAREKN--SNGGSAGNPKFKNYI 515
            V + L NK+K+         S   GE L   G +    + EKN    G S   P      
Sbjct: 172  VYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF 231

Query: 516  CNWCHRKGHIKADCKAWKKSQSNSKQNG--AATNLAIEDEDACDVLSVTDSMVGDKRRWI 689
            C +C  K H   +CK  +  +  +K++G  +  + A  D+D+ D L V    V     WI
Sbjct: 232  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWI 291

Query: 690  IDSGCSQHVCTDKEMFSTYTSV-RGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVS 866
            +DS CS H+CT +  FS+Y  V +G VV MG+ + C +VG G+VQ +  DG   TL  V 
Sbjct: 292  LDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 351

Query: 867  HVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKL-VGNVYVLQGSMVTG 1037
            ++P    NLISL TL  +G+++   DG + VSKG+ V     L    +YVL+G  +TG
Sbjct: 352  YIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTG 409


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score =  224 bits (570), Expect = 5e-61
 Identities = 132/358 (36%), Positives = 199/358 (55%), Gaps = 15/358 (4%)
 Frame = +3

Query: 9    DEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEG 188
            D+KAL  IQL L +++L E   E T+A LW +L+   + K L +++ +K +LF L+M+E 
Sbjct: 53   DQKALALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 112

Query: 189  TPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISE 368
              + +H+AEF  I+ +L  +E K +DED  LLLLCSLP+SY +FRD I+   ++ + + E
Sbjct: 113  DSVITHMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILL-SRDELTLKE 171

Query: 369  VKEHLLNKDKI--------DSQLTGEHLQ-DGSSSGLIAREKN--SNGGSAGNPKFKNYI 515
            V + L NK+K+         S   GE L   G +    + EKN    G S   P      
Sbjct: 172  VYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF 231

Query: 516  CNWCHRKGHIKADCKAWKKSQSNSKQNG--AATNLAIEDEDACDVLSVTDSMVGDKRRWI 689
            C +C  K H   +CK  +  +  +K++G  +  + A  D+D+ D L V    V     WI
Sbjct: 232  CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWI 291

Query: 690  IDSGCSQHVCTDKEMFSTYTSV-RGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVS 866
            +DS CS H+CT +  FS+Y  V +G VV MG+ + C +VG G+VQ +  DG   TL  V 
Sbjct: 292  LDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 351

Query: 867  HVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKL-VGNVYVLQGSMVTG 1037
            ++P    NLISL TL  +G+++   DG + VSKG+ V     +    +YVL+G  +TG
Sbjct: 352  YIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYVLRGCTLTG 409


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  223 bits (569), Expect = 6e-61
 Identities = 129/371 (34%), Positives = 207/371 (55%), Gaps = 28/371 (7%)
 Frame = +3

Query: 9    DEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQEG 188
            D KA++ I L LS+ +L E  KE TAA LW +L+   + K L +++ LKQ+LFL ++Q+ 
Sbjct: 55   DRKAMSYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDD 114

Query: 189  TPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKISE 368
              +  H++ F  I+ +L+ +E K +++D AL+LLCSLPSSY +FRD I+Y  ++T+ + E
Sbjct: 115  GSVMDHLSAFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILY-SRDTLTLKE 173

Query: 369  VKEHLLNKDKIDSQLTGEHLQDGSSSGLIAR----EKNSN------------GGSAGNPK 500
            V + L  K+K+   +  E   +  + GL+ R    EKN+N            G S    +
Sbjct: 174  VYDALHAKEKMKKMVPSEG-SNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGR 232

Query: 501  FKNYICNWCHRKGHIKADCKAWKKSQSNSK-----------QNGAATNLAIEDEDACDVL 647
            +K+  C +C R GH  + C  WK    + +           + G A  +  E  DA ++L
Sbjct: 233  YKS--CKYCKRDGHDISKC--WKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDA-ELL 287

Query: 648  SVTDSMVGDKRRWIIDSGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFR 827
                       +WI+D+ C+ H+C +++ F+TY  V+GG V MG+ + C+V G GTVQ +
Sbjct: 288  VAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 347

Query: 828  AHDGSVTTLHGVSHVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARVTFATKL-VGN 1004
              DG + TL  V H+P  + +LISL TL R G+++   DG + V+KG+ V     +   N
Sbjct: 348  MFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSAN 407

Query: 1005 VYVLQGSMVTG 1037
            +Y LQG+ + G
Sbjct: 408  LYHLQGTTILG 418


>gb|KYP36396.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 485

 Score =  212 bits (539), Expect = 4e-60
 Identities = 128/339 (37%), Positives = 191/339 (56%), Gaps = 15/339 (4%)
 Frame = +3

Query: 6   MDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQE 185
           M EKA +AI LCL D+ L E ++E TAAA+W +L+  Y+ KSLA+RL LKQRL+  +M E
Sbjct: 1   MIEKARSAIILCLGDKALREVAREKTAAAMWLKLESLYMTKSLAHRLCLKQRLYSFKMTE 60

Query: 186 GTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKIS 365
              I   +AEF  I+++L+ +E ++EDED+ALLLL SLP +Y+ F+DAI+YG ++ I + 
Sbjct: 61  TKSIVDQLAEFNKILDDLENIEVQLEDEDKALLLLNSLPRNYEHFKDAILYGKEQDITLD 120

Query: 366 EVKEHLLNKD-------KIDSQLTGEHLQDG-------SSSGLIAREKNSNGGSAGNPKF 503
           EV+  +  K+       K D      ++  G       S  G  AR K+  G  +   KF
Sbjct: 121 EVQTSIRTKELQRQQDNKTDDNGESLNVSRGRSEKKGQSQKGKKARSKSKIGDRS---KF 177

Query: 504 KNYICNWCHRKGHIKADCKAWKKSQSNSKQNGAATNLAIED-EDACDVLSVTDSMVGDKR 680
           K   C +CH+ GH K +C    + Q +S    +A   AI D  ++ DVL VT S    ++
Sbjct: 178 K---CFYCHKVGHFKKNCPERNRDQKSSAD--SADIAAISDGYESADVLVVTTSQT--QK 230

Query: 681 RWIIDSGCSQHVCTDKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHG 860
            W++DSGCS H+C  K+ F T     GG V +G+   C+V G GTV+ +  D     L  
Sbjct: 231 DWVMDSGCSYHMCPKKDYFETLKLKEGGTVLLGDDHPCQVQGIGTVRLKMFDNREYILKD 290

Query: 861 VSHVPRSRYNLISLGTLHRDGFEFRSEDGAMLVSKGARV 977
           V +VP  + NLIS+      G+  +++ G + +  G+ V
Sbjct: 291 VRYVPDLKRNLISISMFDSLGYATKTQHGVLKILNGSLV 329


>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1212

 Score =  221 bits (562), Expect = 5e-60
 Identities = 133/345 (38%), Positives = 203/345 (58%)
 Frame = +3

Query: 3    EMDEKALTAIQLCLSDEVLDEFSKETTAAALWARLQDHYLKKSLANRLILKQRLFLLRMQ 182
            E++ KA +AI L LSDEVL E   E  AA+LW  L D Y+KKSL NRL  KQ L+  +M 
Sbjct: 54   EINLKAHSAILLSLSDEVLREVVAEKDAASLWKALDDKYMKKSLTNRLFQKQHLYTFKMA 113

Query: 183  EGTPIKSHIAEFTSIINELDKVEAKVEDEDQALLLLCSLPSSYKSFRDAIIYGGKETIKI 362
            E TPIK H+  F  II +L  V  K+EDED AL+LLCSLP S+++FRD ++Y G++TI +
Sbjct: 114  ENTPIKDHLDSFNRIILDLGGVGVKIEDEDLALILLCSLPRSFQNFRDTMLY-GRDTIAL 172

Query: 363  SEVKEHLLNKDKIDSQLTGEHLQDGSSSGLIAREKNSNGGSAGNPKFKNYICNWCHRKGH 542
             +VK  LL+K+ + ++++ +   DG +S ++ R +N    S+G  +F++           
Sbjct: 173  KDVKYALLSKE-LQNKVSAD--VDGEASLIVTRGRNKE-KSSGIARFRS----------- 217

Query: 543  IKADCKAWKKSQSNSKQNGAATNLAIEDEDACDVLSVTDSMVGDKRRWIIDSGCSQHVCT 722
                 ++  ++ S   Q G++   + +DE   DVL+V  S  G    W++D+G S H+  
Sbjct: 218  -----RSKSRATSAIVQEGSSLVESSDDEVGTDVLTV--STAGSANTWVVDTGASYHMTF 270

Query: 723  DKEMFSTYTSVRGGVVFMGNSSTCKVVGKGTVQFRAHDGSVTTLHGVSHVPRSRYNLISL 902
             + +F+T+    G V+ +G+ +T  V G G+VQ + HDG++ T      VP  R NLISL
Sbjct: 271  SRNLFTTFKEWNGSVM-LGDETTLSVKGSGSVQIKTHDGTIRTFDAWL-VPELRKNLISL 328

Query: 903  GTLHRDGFEFRSEDGAMLVSKGARVTFATKLVGNVYVLQGSMVTG 1037
            GTL + G+++  E+G + VSKG+      KL   +Y L G+ V G
Sbjct: 329  GTLDKQGYKYSGENGQIKVSKGSMTILKGKLQHGIYTLIGNSVIG 373