BLASTX nr result

ID: Ophiopogon22_contig00000010 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00000010
         (373 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK76779.1| uncharacterized protein A4U43_C03F32060 [Asparagu...    59   2e-07
ref|XP_020259177.1| nuclear-pore anchor [Asparagus officinalis]        59   2e-07

>gb|ONK76779.1| uncharacterized protein A4U43_C03F32060 [Asparagus officinalis]
          Length = 2000

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +2

Query: 2    PSPSTVATEMDEPAATRGGGRTITIADRAKENAIVRQQSQQARMTATTPP 151
            P+ S V TE DE A TR GGRTI+I +RA+ENA +RQ  QQARM   TPP
Sbjct: 1929 PNRSVVPTETDEHAQTRSGGRTISITERARENARLRQ--QQARMNTPTPP 1976


>ref|XP_020259177.1| nuclear-pore anchor [Asparagus officinalis]
          Length = 2046

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +2

Query: 2    PSPSTVATEMDEPAATRGGGRTITIADRAKENAIVRQQSQQARMTATTPP 151
            P+ S V TE DE A TR GGRTI+I +RA+ENA +RQ  QQARM   TPP
Sbjct: 1975 PNRSVVPTETDEHAQTRSGGRTISITERARENARLRQ--QQARMNTPTPP 2022


Top