BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00040158
         (361 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63162.1| RNase H family protein [Asparagus officinalis]         145   9e-33
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   144   3e-32
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...   105   2e-20
gb|ABD63198.1| gag/pol polyprotein, related [Asparagus officinalis]   100   3e-19

>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score =  145 bits (367), Expect = 9e-33
 Identities = 76/113 (67%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
 Frame = +3

Query: 24  YGHSSRTPSWESDVSVGAIFKNLSVNMTSTDHLEEE-DEDPGLIQSSNDP*IKRLNAL*D 200
           + HSS   S+ESDVS+G  FKNL+VNM ST HL+E+  +D  L++S+NDP IKRLN L D
Sbjct: 39  HDHSSGISSYESDVSIGPFFKNLTVNMVSTSHLDEDAGDDEELMESTNDPWIKRLNILWD 98

Query: 201 LCFEQREPPTDDKVIQVNMGSEENPKPIFISESLSPSEGGDLISLIR*YIDVF 359
           + FEQREPPT+DKVIQVNMG E +PKPIFI+E LS SE  DLISLIR YIDVF
Sbjct: 99  MRFEQREPPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVF 151


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  144 bits (362), Expect = 3e-32
 Identities = 76/111 (68%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = +3

Query: 30  HSSRTPSWESDVSVGAIFKNLSVNMTSTDHLEEE-DEDPGLIQSSNDP*IKRLNAL*DLC 206
           HSSR  S ESDVSVG  FK+L+VNMTST H +E+   D  LI+ ++DP IKRLN L D+C
Sbjct: 545 HSSRISSCESDVSVGLFFKSLTVNMTSTSHPDEDAGGDEELIEFTDDPWIKRLNILWDMC 604

Query: 207 FEQREPPTDDKVIQVNMGSEENPKPIFISESLSPSEGGDLISLIR*YIDVF 359
           FEQREPPT+DKVIQ+NMG E NPKPIFI+E LS SE  +LISLIR YIDVF
Sbjct: 605 FEQREPPTEDKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVF 655


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score =  105 bits (261), Expect = 2e-20
 Identities = 55/111 (49%), Positives = 74/111 (66%)
 Frame = +3

Query: 27  GHSSRTPSWESDVSVGAIFKNLSVNMTSTDHLEEEDEDPGLIQSSNDP*IKRLNAL*DLC 206
           G+ S +  W+SD S+G  FK L VNM + D    E++D   + +  DP I  LN      
Sbjct: 378 GYPSDSSEWDSDTSLGEAFKALMVNMATADPSTMENDDQ--MPTWEDPWIHHLNMQYGDR 435

Query: 207 FEQREPPTDDKVIQVNMGSEENPKPIFISESLSPSEGGDLISLIR*YIDVF 359
           FEQREPPT+DK++Q+NMG E NPKPIFIS+SL  +E  +LI+L++ YIDVF
Sbjct: 436 FEQREPPTEDKIVQINMGDEANPKPIFISDSLLSNEKEELIALVKEYIDVF 486


>gb|ABD63198.1| gag/pol polyprotein, related [Asparagus officinalis]
          Length = 313

 Score =  100 bits (250), Expect = 3e-19
 Identities = 59/110 (53%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
 Frame = +3

Query: 33  SSRTPSWESDVSVGAIFKNLSVNMTSTDHLE-EEDEDPGLIQSSNDP*IKRLNAL*DLCF 209
           SS + +W+SDVSVG +FK+L VNM +TD  +  EDE   L   + D    R++A  +  F
Sbjct: 50  SSTSSAWDSDVSVGDLFKDLIVNMATTDPTKIMEDEQVPLYDEAWD---HRVSAQWNGRF 106

Query: 210 EQREPPTDDKVIQVNMGSEENPKPIFISESLSPSEGGDLISLIR*YIDVF 359
           EQR+PPT DK++Q+NMG+E N KPIFIS+SL   E  +LISLIR YIDVF
Sbjct: 107 EQRKPPTKDKILQINMGNEANLKPIFISDSLPSWEKENLISLIREYIDVF 156