BLASTX nr result
ID: Ophiopogon21_contig00033804
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00033804
(915 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAH79979.1| putative unclassified retrotransposon protein [O... 46 7e-17
ref|NP_001173560.1| Os03g0643433 [Oryza sativa Japonica Group] g... 48 1e-15
dbj|BAS85450.1| Os03g0643433 [Oryza sativa Japonica Group] 48 1e-15
ref|XP_008677984.1| PREDICTED: putative ribonuclease H protein A... 49 4e-15
gb|ABA91475.1| retrotransposon protein, putative, unclassified [... 47 6e-15
ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 ... 52 8e-15
ref|XP_008650633.1| PREDICTED: uncharacterized protein LOC103631... 45 2e-14
gb|AAN05341.1| Putative non-LTR retroelement reverse transcripta... 46 2e-14
gb|ABF94719.1| retrotransposon protein, putative, unclassified [... 46 2e-14
ref|XP_002443403.1| hypothetical protein SORBIDRAFT_08g018960 [S... 47 5e-14
gb|AAP53939.1| retrotransposon protein, putative, unclassified [... 43 6e-14
ref|XP_002443285.1| hypothetical protein SORBIDRAFT_08g016940 [S... 47 6e-14
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S... 49 8e-14
gb|ABA96523.1| retrotransposon protein, putative, unclassified, ... 45 1e-13
gb|ABA93441.1| retrotransposon protein, putative, unclassified [... 48 1e-13
ref|XP_008644838.1| PREDICTED: putative ribonuclease H protein A... 51 3e-13
emb|CAH68023.1| OSIGBa0136O08-OSIGBa0153H12.1 [Oryza sativa Indi... 49 4e-13
gb|ABA95227.1| retrotransposon protein, putative, unclassified [... 44 6e-13
dbj|BAC15618.2| unnamed protein product [Oryza sativa Japonica G... 44 6e-13
gb|ABA91325.1| retrotransposon protein, putative, unclassified [... 44 6e-13
>dbj|BAH79979.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 1283
Score = 45.8 bits (107), Expect(3) = 7e-17
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +2
Query: 479 FNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
F C F + YLGIPI +L+ DW + +R E L +WKG LS G
Sbjct: 1104 FGCSSGEFPLCYLGIPIHYRKLRNADWTGVEERFEKRLSSWKGKLLSTG 1152
Score = 45.4 bits (106), Expect(3) = 7e-17
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWKC 746
LTLIN VLSS+ Y MS+F +P ++K++D R+ F+W+C
Sbjct: 1155 LTLINSVLSSLPLYMMSFFAIPRGVLKKLDYFRSRFYWQC 1194
Score = 43.9 bits (102), Expect(3) = 7e-17
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +CR K Q GLGI +L +N A+L KWL+KLL++ D W
Sbjct: 1203 LTKWSIMCRPKEQGGLGIHDLDMKNIALLSKWLFKLLMT-DGVW 1245
>ref|NP_001173560.1| Os03g0643433 [Oryza sativa Japonica Group]
gi|255674738|dbj|BAH92288.1| Os03g0643433 [Oryza sativa
Japonica Group]
Length = 721
Score = 47.8 bits (112), Expect(3) = 1e-15
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 461 MDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
MD F C+ + KYLGIP+ R+ DW + DR + L +WKG LS G
Sbjct: 489 MDYVKNFGCDMGKYPFKYLGIPMHHKRISNKDWQAIEDRFQKKLSSWKGKHLSVG 543
Score = 43.9 bits (102), Expect(3) = 1e-15
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 606 EHVCLEDILTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWKC 746
+H+ + L LIN VLSS++ + +S+F +P I+K++D R+ FFW+C
Sbjct: 538 KHLSVGGRLVLINSVLSSLAMFMLSFFEIPKGILKKLDYYRSRFFWQC 585
Score = 39.3 bits (90), Expect(3) = 1e-15
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C K GLGI NL QN +L KWL++ LI+ + W
Sbjct: 594 LAKWSVLCSPKECGGLGIQNLETQNRCLLSKWLFQ-LINEEGVW 636
>dbj|BAS85450.1| Os03g0643433 [Oryza sativa Japonica Group]
Length = 643
Score = 47.8 bits (112), Expect(3) = 1e-15
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 461 MDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
MD F C+ + KYLGIP+ R+ DW + DR + L +WKG LS G
Sbjct: 262 MDYVKNFGCDMGKYPFKYLGIPMHHKRISNKDWQAIEDRFQKKLSSWKGKHLSVG 316
Score = 43.9 bits (102), Expect(3) = 1e-15
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 606 EHVCLEDILTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWKC 746
+H+ + L LIN VLSS++ + +S+F +P I+K++D R+ FFW+C
Sbjct: 311 KHLSVGGRLVLINSVLSSLAMFMLSFFEIPKGILKKLDYYRSRFFWQC 358
Score = 39.3 bits (90), Expect(3) = 1e-15
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C K GLGI NL QN +L KWL++ LI+ + W
Sbjct: 367 LAKWSVLCSPKECGGLGIQNLETQNRCLLSKWLFQ-LINEEGVW 409
>ref|XP_008677984.1| PREDICTED: putative ribonuclease H protein At1g65750 [Zea mays]
Length = 358
Score = 48.9 bits (115), Expect(3) = 4e-15
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 479 FNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
F C+ ++ +YLGIP+ + +L DW L++R+E L +WKG LS G
Sbjct: 50 FGCKTGTYPFRYLGIPMHVRKLSNADWSTLLERIEKKLGSWKGKHLSYG 98
Score = 40.8 bits (94), Expect(3) = 4e-15
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 606 EHVCLEDILTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
+H+ L LIN VLSS+ Y +S+F +P ++K++D +R+ FFW+
Sbjct: 93 KHLSYGGRLVLINSVLSSLPLYMLSFFEIPREVLKKVDYLRSRFFWQ 139
Score = 39.7 bits (91), Expect(3) = 4e-15
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C+ K GLGI N+ QN +L KWL+KLL + + W
Sbjct: 149 LAKWSILCQPKDIGGLGIKNIDIQNKCLLSKWLFKLL-NEEGMW 191
>gb|ABA91475.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 994
Score = 47.4 bits (111), Expect(3) = 6e-15
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 449 ENNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
+ N+ + F C+ SF +YLG+P+ +L DW + +R+E L WKG L+ G
Sbjct: 677 KENEAFYSQLFGCKIGSFPFRYLGLPMHTRKLNNKDWQEIKNRIEKKLGGWKGKLLTAG 735
Score = 45.8 bits (107), Expect(3) = 6e-15
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C+ K Q GLGI NL QN +L KWL+KLL + D W
Sbjct: 786 LAKWTVMCQPKIQGGLGIPNLEIQNKCLLSKWLFKLL-NEDGLW 828
Score = 35.4 bits (80), Expect(3) = 6e-15
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
L LIN VLSS+ + +S+F +P ++++ID R+ F+W+
Sbjct: 738 LVLINSVLSSLPMFMLSFFEIPKGVLEKIDCYRSRFYWQ 776
>ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 [Sorghum bicolor]
gi|241947177|gb|EES20322.1| hypothetical protein
SORBIDRAFT_0015s007030 [Sorghum bicolor]
Length = 933
Score = 51.6 bits (122), Expect(3) = 8e-15
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 449 ENNQMDI-ATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLS 619
E+N ++ A FNC+ SF KYLG+P+ R+ DW+P+V++ L WKG LS
Sbjct: 739 EDNWAEVYAGIFNCQVGSFPFKYLGVPVSPSRIHVRDWLPIVEKAYRKLDVWKGNSLS 796
Score = 41.2 bits (95), Expect(3) = 8e-15
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKL 888
L W +C+SK + GLGI +R N ++L KWLWKL
Sbjct: 849 LIKWTKICKSKKKGGLGIKCIRKMNISLLCKWLWKL 884
Score = 35.4 bits (80), Expect(3) = 8e-15
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 633 TLINHVLSSISSY*MSYFLLPNWIIKRIDRI-RTFFWK 743
TLI+ LS+ Y +S +LLP I ++D+I RTFFW+
Sbjct: 802 TLIDSTLSNAPLYQISIYLLPKTITYKLDKIRRTFFWQ 839
>ref|XP_008650633.1| PREDICTED: uncharacterized protein LOC103631517 [Zea mays]
Length = 1324
Score = 45.4 bits (106), Expect(3) = 2e-14
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +2
Query: 479 FNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
F C S KYLGIP+ RL+ DW ++DR E L WK LS G
Sbjct: 848 FGCGIGSIPFKYLGIPMTHRRLRNSDWQGVIDRFEKRLSTWKAKFLSSG 896
Score = 44.7 bits (104), Expect(3) = 2e-14
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W VC+ KA GLG+ NL +N ++L KWL+KLL + + RW
Sbjct: 947 LAKWHIVCQPKALGGLGVSNLALKNISLLSKWLFKLL-NEEGRW 989
Score = 37.0 bits (84), Expect(3) = 2e-14
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
L L+N VLSS+ + MS+F +P ++K+++ IR+ FFW+
Sbjct: 899 LVLLNSVLSSLPIFMMSFFEIPVGVLKKLNAIRSRFFWQ 937
>gb|AAN05341.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 603
Score = 46.2 bits (108), Expect(3) = 2e-14
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 479 FNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
F C ++ +YLGIP+ +L DW + +R + L +WKG CLS G
Sbjct: 192 FGCRSGTYPFRYLGIPMHHKKLSNKDWQIIEERFQRKLSSWKGKCLSVG 240
Score = 42.4 bits (98), Expect(3) = 2e-14
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C K GLGI NL QN +L KWL+K LI+ D W
Sbjct: 291 LARWSVICTPKDCGGLGIQNLNVQNKCLLSKWLYK-LINEDGVW 333
Score = 38.5 bits (88), Expect(3) = 2e-14
Identities = 18/39 (46%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
L LIN VLSS++ + +S+F +P I+K++D R+ FFW+
Sbjct: 243 LVLINSVLSSLAMFMLSFFEVPKGILKKLDYYRSRFFWQ 281
>gb|ABF94719.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 581
Score = 46.2 bits (108), Expect(3) = 2e-14
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 479 FNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
F C ++ +YLGIP+ +L DW + +R + L +WKG CLS G
Sbjct: 192 FGCRSGTYPFRYLGIPMHHKKLSNKDWQIIEERFQRKLSSWKGKCLSVG 240
Score = 42.4 bits (98), Expect(3) = 2e-14
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C K GLGI NL QN +L KWL+K LI+ D W
Sbjct: 291 LARWSVICTPKDCGGLGIQNLNVQNKCLLSKWLYK-LINEDGVW 333
Score = 38.5 bits (88), Expect(3) = 2e-14
Identities = 18/39 (46%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
L LIN VLSS++ + +S+F +P I+K++D R+ FFW+
Sbjct: 243 LVLINSVLSSLAMFMLSFFEVPKGILKKLDYYRSRFFWQ 281
>ref|XP_002443403.1| hypothetical protein SORBIDRAFT_08g018960 [Sorghum bicolor]
gi|241944096|gb|EES17241.1| hypothetical protein
SORBIDRAFT_08g018960 [Sorghum bicolor]
Length = 538
Score = 46.6 bits (109), Expect(3) = 5e-14
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLL 891
L WD +CR K Q GLGI+NL+ QN +L KWL LL
Sbjct: 288 LAKWDILCRPKDQGGLGILNLQLQNKCLLAKWLVNLL 324
Score = 40.0 bits (92), Expect(3) = 5e-14
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 446 TENNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
T+ + + F C +L +YLGIP+ +L +W + DR + L WK LS G
Sbjct: 178 TKEMESYYTSLFGCNAGEYLFRYLGIPMHHRQLLNSEWRKVEDRFKQKLSCWKAKYLSYG 237
Score = 38.9 bits (89), Expect(3) = 5e-14
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIR-TFFWK 743
L L+N VLSS+ + MS+F +P +IK +D R +FFW+
Sbjct: 240 LVLLNSVLSSLPMFMMSFFEIPKGVIKNLDNYRSSFFWQ 278
>gb|AAP53939.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1652
Score = 42.7 bits (99), Expect(3) = 6e-14
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 479 FNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
F C+ + + KYLGI + R+ DW + +R++ L +WKG LS G
Sbjct: 1454 FGCDTEDYPFKYLGIRMHHKRINNKDWQGVEERIQKKLSSWKGKFLSVG 1502
Score = 41.6 bits (96), Expect(3) = 6e-14
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +C+ K GLGI NL QN +L KWL+K LI+ + W
Sbjct: 1553 LARWSVLCKPKECGGLGIQNLEIQNKCLLSKWLYK-LINEEGVW 1595
Score = 40.8 bits (94), Expect(3) = 6e-14
Identities = 18/40 (45%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWKC 746
L LIN VLS+++ + +S+F +P I+K++D R+ FFW+C
Sbjct: 1505 LVLINSVLSNLAIFMLSFFEIPKGILKKLDYYRSRFFWQC 1544
>ref|XP_002443285.1| hypothetical protein SORBIDRAFT_08g016940 [Sorghum bicolor]
gi|241943978|gb|EES17123.1| hypothetical protein
SORBIDRAFT_08g016940 [Sorghum bicolor]
Length = 663
Score = 46.6 bits (109), Expect(3) = 6e-14
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLL 891
L WD +CR K Q GLGI+NL+ QN +L KWL LL
Sbjct: 395 LAKWDILCRPKDQGGLGILNLQLQNKCLLAKWLVNLL 431
Score = 39.7 bits (91), Expect(3) = 6e-14
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 473 TFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
+ F C +L +YLGIP+ +L +W + DR + L WK LS G
Sbjct: 294 SLFGCNAGEYLFRYLGIPMHHRQLLNSEWRKVEDRFKQKLSCWKAKYLSYG 344
Score = 38.9 bits (89), Expect(3) = 6e-14
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIR-TFFWK 743
L L+N VLSS+ + MS+F +P +IK +D R +FFW+
Sbjct: 347 LVLLNSVLSSLPMFMMSFFEIPKGVIKNLDNYRSSFFWQ 385
>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
gi|241946107|gb|EES19252.1| hypothetical protein
SORBIDRAFT_09g007400 [Sorghum bicolor]
Length = 835
Score = 48.5 bits (114), Expect(3) = 8e-14
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +2
Query: 440 DGTENNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLS 619
D + +DI FNC+ +F +KYLG+P+ RL DW PL+D+ L WKG +S
Sbjct: 350 DNWDRKYVDI---FNCQVGTFPIKYLGVPVSPSRLHVSDWSPLIDKSMKKLDIWKGGNMS 406
Score = 40.8 bits (94), Expect(3) = 8e-14
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L W +CRSK + G+GI ++R N ++L KW WK L + D+ W
Sbjct: 459 LIKWTKICRSKKKGGIGIKDIRKMNVSLLIKWWWK-LDNEDDVW 501
Score = 35.4 bits (80), Expect(3) = 8e-14
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 633 TLINHVLSSISSY*MSYFLLPNWIIKRIDRI-RTFFWK 743
TLI+ L++ Y MS +LLP +I R+D+I R FFW+
Sbjct: 412 TLISSSLNNAPIYHMSIYLLPKSVIGRLDKIRRNFFWQ 449
>gb|ABA96523.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1244
Score = 45.1 bits (105), Expect(3) = 1e-13
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 443 GTENNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSR 622
G + + F C SF +YLGIPI +L+ DW + DR + L WKG S
Sbjct: 1024 GAKEMEDQYRQLFGCNSGSFPFRYLGIPIHYRKLRNSDWKCVEDRFQRKLSTWKGKNNSY 1083
Query: 623 G 625
G
Sbjct: 1084 G 1084
Score = 43.1 bits (100), Expect(3) = 1e-13
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDNRW 912
L D +CR K Q GLG++NL N +L KWL+KLL + D W
Sbjct: 1135 LTKCDYICRPKDQGGLGVLNLDIMNRYLLSKWLFKLL-NGDGLW 1177
Score = 36.2 bits (82), Expect(3) = 1e-13
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIR-TFFW 740
L L+N VLSS+ + +S+F +P +++R+D R +FFW
Sbjct: 1087 LVLLNSVLSSLPMFMLSFFEIPRGVLQRLDYYRSSFFW 1124
>gb|ABA93441.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1296
Score = 48.1 bits (113), Expect(3) = 1e-13
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 470 ATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
++ F C+ SF +KYLGIP+ +L DW + R+E L +WKG +S G
Sbjct: 1148 SSIFGCKLGSFPVKYLGIPMHFRKLSNNDWKVIEQRIERKLSSWKGKHMSVG 1199
Score = 38.9 bits (89), Expect(3) = 1e-13
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +3
Query: 606 EHVCLEDILTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
+H+ + L LIN VLSS++ + +S+F +P ++++ID R+ FFW+
Sbjct: 1194 KHMSVGGRLVLINSVLSSLAMFMISFFEIPKGVLQKIDYYRSRFFWQ 1240
Score = 37.0 bits (84), Expect(3) = 1e-13
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLIS 897
L WD +C+ K Q GLG+ NL QN +L + +L+S
Sbjct: 1250 LTRWDIICQPKDQGGLGVHNLEIQNKCLLSNFQGNILVS 1288
>ref|XP_008644838.1| PREDICTED: putative ribonuclease H protein At1g65750 [Zea mays]
Length = 600
Score = 50.8 bits (120), Expect(3) = 3e-13
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = +2
Query: 452 NNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSR 622
N I+ C K+F YLGIP+ I RL D +P VD+V LP WK LSR
Sbjct: 145 NELTTISALLPCATKNFPCTYLGIPLSIRRLANSDLLPFVDKVADKLPGWKANLLSR 201
Score = 37.4 bits (85), Expect(3) = 3e-13
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 778 CLRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLW 882
CL SW+AV R GLGI+NL A+ +WLW
Sbjct: 253 CLVSWEAVQRPLKYGGLGILNLEMFGWALRARWLW 287
Score = 34.7 bits (78), Expect(3) = 3e-13
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRID-RIRTFFWK 743
L ++ VLSS+ Y M LP W+ K ID R R F WK
Sbjct: 205 LVMVKTVLSSVPIYLMLALELPKWVFKAIDKRRRGFLWK 243
>emb|CAH68023.1| OSIGBa0136O08-OSIGBa0153H12.1 [Oryza sativa Indica Group]
Length = 1171
Score = 49.3 bits (116), Expect(3) = 4e-13
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 470 ATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSRG 625
A F C+ +F +YLGIPI +L+ +W +V+R E L +WKG LS G
Sbjct: 857 AQLFGCQVGNFPFRYLGIPIHCRKLRNAEWKEVVERFEKKLSSWKGKLLSLG 908
Score = 41.2 bits (95), Expect(3) = 4e-13
Identities = 18/39 (46%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRIDRIRT-FFWK 743
LTLIN VLSS+ Y MS+ +P+ ++K++D +R+ F+W+
Sbjct: 911 LTLINSVLSSLPMYMMSFLAIPSGVLKKLDYLRSRFYWQ 949
Score = 32.0 bits (71), Expect(3) = 4e-13
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 781 LRSWDAVCRSKAQEGLGIINLR*QNHAILGKWL--WKLL 891
L WD +CR K Q+GLGI +L + ++ +WL W +L
Sbjct: 959 LAKWDIICRPKDQQGLGIHDL--EVITLVTRWLRTWAIL 995
>gb|ABA95227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2776
Score = 44.3 bits (103), Expect(3) = 6e-13
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 766 SRIKCLRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDN--RWV 915
S KCL +WD VC +K + GLGI +L+ QN A+L K L+ L N + W+
Sbjct: 2340 SGAKCLVAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLFSDNSSWTNWI 2391
Score = 40.0 bits (92), Expect(3) = 6e-13
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 452 NNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSR 622
+ + ++ C+ +S M YLG+P+ + +L D P+V +V+ L W+ + LS+
Sbjct: 2236 SKESSLSELLQCKLESLPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQ 2292
Score = 37.4 bits (85), Expect(3) = 6e-13
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRID-RIRTFFW 740
L L+N VLSS+ Y MS F LP +I+ ID R R FFW
Sbjct: 2296 LILVNAVLSSVPVYAMSAFKLPPKVIEAIDKRRRAFFW 2333
>dbj|BAC15618.2| unnamed protein product [Oryza sativa Japonica Group]
Length = 1197
Score = 44.3 bits (103), Expect(3) = 6e-13
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 766 SRIKCLRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDN--RWV 915
S KCL +WD VC +K + GLGI +L+ QN A+L K L+ L N + W+
Sbjct: 838 SGAKCLVAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLFSDNSSWTNWI 889
Score = 40.0 bits (92), Expect(3) = 6e-13
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 452 NNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSR 622
+ + ++ C+ +S M YLG+P+ + +L D P+V +V+ L W+ + LS+
Sbjct: 734 SKESSLSELLQCKLESLPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQ 790
Score = 37.4 bits (85), Expect(3) = 6e-13
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRID-RIRTFFW 740
L L+N VLSS+ Y MS F LP +I+ ID R R FFW
Sbjct: 794 LILVNAVLSSVPVYAMSAFKLPPKVIEAIDKRRRAFFW 831
>gb|ABA91325.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 658
Score = 44.3 bits (103), Expect(3) = 6e-13
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 766 SRIKCLRSWDAVCRSKAQEGLGIINLR*QNHAILGKWLWKLLISNDN--RWV 915
S KCL +WD VC +K + GLGI +L+ QN A+L K L+ L N + W+
Sbjct: 349 SGAKCLVAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLFSGNSSWTNWI 400
Score = 40.0 bits (92), Expect(3) = 6e-13
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 452 NNQMDIATFFNCERKSFLMKYLGIPIRIGRLKKPDWMPLVDRVEHCLPNWKGTCLSR 622
+ + ++ C+ +S M YLG+P+ + +L D P+V +V+ L W+ + LS+
Sbjct: 245 SKESSLSELLQCKLESLPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQ 301
Score = 37.4 bits (85), Expect(3) = 6e-13
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 630 LTLINHVLSSISSY*MSYFLLPNWIIKRID-RIRTFFW 740
L L+N VLSS+ Y MS F LP +I+ ID R R FFW
Sbjct: 305 LILVNAVLSSVPVYAMSAFKLPPKVIEAIDKRRRAFFW 342