BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00025983
         (547 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KFK27271.1| hypothetical protein AALP_AA8G360400 [Arabis alpina]    62   1e-07
ref|XP_008451173.1| PREDICTED: DNA ligase 4 isoform X3 [Cucumis ...    62   2e-07
ref|XP_008451172.1| PREDICTED: DNA ligase 4 isoform X2 [Cucumis ...    62   2e-07
ref|XP_008451168.1| PREDICTED: DNA ligase 4 isoform X1 [Cucumis ...    62   2e-07
ref|XP_010111548.1| DNA ligase 4 [Morus notabilis] gi|587944758|...    60   6e-07
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                          60   6e-07
ref|XP_011017673.1| PREDICTED: DNA ligase 4 isoform X4 [Populus ...    59   2e-06
ref|XP_011017672.1| PREDICTED: DNA ligase 4 isoform X3 [Populus ...    59   2e-06
ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus ...    59   2e-06
dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]         58   3e-06
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554...    58   3e-06
gb|KMZ60578.1| DNA ligase 4 [Zostera marina]                           56   9e-06

>gb|KFK27271.1| hypothetical protein AALP_AA8G360400 [Arabis alpina]
          Length = 1206

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
 Frame = -2

Query: 504  SDELESGESDGKAEELMEEAHVDLEKHESSK---------DNKEP-RKGRPARTPYQGAR 355
            SD  ES +S+ +  ++    + + E+ +SSK          N  P ++GR +    Q  +
Sbjct: 917  SDTEESDKSEHETSKVAISGNAETEEPDSSKRAIVSSRGRSNSRPVKRGRSSTNSMQRVQ 976

Query: 354  ARIGNRAVKINSDELESADSIDESDGKEATEPMEETHFDLEKHESSEDDKQPRRGRPARA 175
               G +  KI  DE E++D  +E       +  EET          E  K PRRGRPA  
Sbjct: 977  RHRGKQPSKIGGDETENSDDSEEKVSSRLGDIAEET------DSLGEAQKNPRRGRPA-- 1028

Query: 174  STKRRKAAPKPCQRT-RARIGKRAAKINPDELVNSDSVDEFDSKEADE 34
              KR K++    QR  R R GK+  KI  DE   S+  D FD K  +E
Sbjct: 1029 --KRGKSSVGQTQRVQRLRRGKKPLKIGGDE---SEENDGFDDKNEEE 1071


>ref|XP_008451173.1| PREDICTED: DNA ligase 4 isoform X3 [Cucumis melo]
          Length = 1054

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
 Frame = -2

Query: 396  RKGRPARTPYQGARA----------RIGNRAVKINSDELESADSIDESDGKEA------- 268
            ++G+PA    Q A++          R      KI+  E +S+D+ DE    E        
Sbjct: 812  KRGKPATRSMQKAKSGVEQVRRAQTRKAKGPAKISEVESDSSDNTDEKTKAETGNIGTLC 871

Query: 267  TEPMEETHFDLEKHESSEDDKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKINPD 88
            TE  E+  F   ++E S   K   RGRP   + +R KA  +  +RTRARI KR+AKI   
Sbjct: 872  TENSEKHVFKTLENEISNSKK---RGRPTAGNAQREKAEAEKIRRTRARIAKRSAKIGGS 928

Query: 87   ELVNSDSVDEFDSKE 43
            E  N+DS DE  ++E
Sbjct: 929  ESGNNDSADEETNEE 943


>ref|XP_008451172.1| PREDICTED: DNA ligase 4 isoform X2 [Cucumis melo]
          Length = 1213

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
 Frame = -2

Query: 396  RKGRPARTPYQGARA----------RIGNRAVKINSDELESADSIDESDGKEA------- 268
            ++G+PA    Q A++          R      KI+  E +S+D+ DE    E        
Sbjct: 971  KRGKPATRSMQKAKSGVEQVRRAQTRKAKGPAKISEVESDSSDNTDEKTKAETGNIGTLC 1030

Query: 267  TEPMEETHFDLEKHESSEDDKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKINPD 88
            TE  E+  F   ++E S   K   RGRP   + +R KA  +  +RTRARI KR+AKI   
Sbjct: 1031 TENSEKHVFKTLENEISNSKK---RGRPTAGNAQREKAEAEKIRRTRARIAKRSAKIGGS 1087

Query: 87   ELVNSDSVDEFDSKE 43
            E  N+DS DE  ++E
Sbjct: 1088 ESGNNDSADEETNEE 1102


>ref|XP_008451168.1| PREDICTED: DNA ligase 4 isoform X1 [Cucumis melo]
          Length = 1214

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
 Frame = -2

Query: 396  RKGRPARTPYQGARA----------RIGNRAVKINSDELESADSIDESDGKEA------- 268
            ++G+PA    Q A++          R      KI+  E +S+D+ DE    E        
Sbjct: 972  KRGKPATRSMQKAKSGVEQVRRAQTRKAKGPAKISEVESDSSDNTDEKTKAETGNIGTLC 1031

Query: 267  TEPMEETHFDLEKHESSEDDKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKINPD 88
            TE  E+  F   ++E S   K   RGRP   + +R KA  +  +RTRARI KR+AKI   
Sbjct: 1032 TENSEKHVFKTLENEISNSKK---RGRPTAGNAQREKAEAEKIRRTRARIAKRSAKIGGS 1088

Query: 87   ELVNSDSVDEFDSKE 43
            E  N+DS DE  ++E
Sbjct: 1089 ESGNNDSADEETNEE 1103


>ref|XP_010111548.1| DNA ligase 4 [Morus notabilis] gi|587944758|gb|EXC31206.1| DNA
           ligase 4 [Morus notabilis]
          Length = 821

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 36/117 (30%), Positives = 63/117 (53%)
 Frame = -2

Query: 393 KGRPARTPYQGARARIGNRAVKINSDELESADSIDESDGKEATEPMEETHFDLEKHESSE 214
           +G+    P +  RAR+G++A KI+ +E + + S +E+  KE ++ + E+H ++ + +S  
Sbjct: 581 RGKAVAKPARKTRARVGSKAAKISGNESDDSVSDEENTTKEESKQLGESHGNIVEEQS-- 638

Query: 213 DDKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKINPDELVNSDSVDEFDSKE 43
                           + K   K  +RTRARIGK+ AKI+ +E  ++ S DE   KE
Sbjct: 639 -------------QISKAKGGAKQVRRTRARIGKKPAKISGNESEDNASQDESTFKE 682


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
 Frame = -2

Query: 546  RTRARIGNRAAKINSDEL-ESGESDGKAEELMEEAHVDLEKHESSKDNKEPRKGRPA--- 379
            RTRARI N+ AKI+ ++  ES   D K EE           ++ S  N+E   G+PA   
Sbjct: 1006 RTRARIVNKPAKISVEKSDESCSQDDKNEE-----------NDMSDGNEEIHGGKPAGGI 1054

Query: 378  -RTPYQGARARIGNRAVKINSDELESADSIDESDGKEATEPMEETHFDLEKHESSEDDKQ 202
             +    GA      RA  +N     S +  DES   +            E++E SE   +
Sbjct: 1055 TKKRKMGAGLARRTRACIVNKPAKTSEEKPDESCCHDEKS---------EENEMSEGSYE 1105

Query: 201  PRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKI----NPDELVNSDSVDEFDSKEADE 34
               GRPA  ST++ K      +RTR RI  + AKI    + +  ++ D ++E +  E +E
Sbjct: 1106 IHGGRPAGGSTRKGKIGAGQARRTRTRIANKPAKILEEKSEESCLHDDEIEENEMSEGNE 1165


>ref|XP_011017673.1| PREDICTED: DNA ligase 4 isoform X4 [Populus euphratica]
          Length = 1081

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
 Frame = -2

Query: 546  RTRARIGNRAAKINSDELESGES-DGKAEELMEEAHVDLEKHESSKDNKEPRKGRPA--- 379
            RTRARI N+ AKI+ ++ +   S D K EE           ++ S  N+E   G+PA   
Sbjct: 768  RTRARIVNKPAKISVEKSDDSCSHDDKNEE-----------NDMSDGNEEIHIGKPAGGI 816

Query: 378  -RTPYQGARARIGNRAVKINSDELESADSIDES---DGKEATEPMEETHFDLEKHESSED 211
             +    GA      RA  +N     S +  DES   D K             E++E SE 
Sbjct: 817  TKKRKMGAGLARRTRACIVNKPAKISEEKPDESCCHDDKN------------EENEMSEG 864

Query: 210  DKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKI----NPDELVNSDSVDEFDSKE 43
            + +   GRPA  STK+ K      +RTR RI  + AKI    + +  ++ D ++E +  E
Sbjct: 865  NYEIHGGRPAGGSTKKGKIGAGQARRTRTRIANKPAKILEERSEESCLHDDEIEENEMNE 924

Query: 42   ADE 34
             +E
Sbjct: 925  ENE 927


>ref|XP_011017672.1| PREDICTED: DNA ligase 4 isoform X3 [Populus euphratica]
          Length = 1085

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
 Frame = -2

Query: 546  RTRARIGNRAAKINSDELESGES-DGKAEELMEEAHVDLEKHESSKDNKEPRKGRPA--- 379
            RTRARI N+ AKI+ ++ +   S D K EE           ++ S  N+E   G+PA   
Sbjct: 772  RTRARIVNKPAKISVEKSDDSCSHDDKNEE-----------NDMSDGNEEIHIGKPAGGI 820

Query: 378  -RTPYQGARARIGNRAVKINSDELESADSIDES---DGKEATEPMEETHFDLEKHESSED 211
             +    GA      RA  +N     S +  DES   D K             E++E SE 
Sbjct: 821  TKKRKMGAGLARRTRACIVNKPAKISEEKPDESCCHDDKN------------EENEMSEG 868

Query: 210  DKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKI----NPDELVNSDSVDEFDSKE 43
            + +   GRPA  STK+ K      +RTR RI  + AKI    + +  ++ D ++E +  E
Sbjct: 869  NYEIHGGRPAGGSTKKGKIGAGQARRTRTRIANKPAKILEERSEESCLHDDEIEENEMNE 928

Query: 42   ADE 34
             +E
Sbjct: 929  ENE 931


>ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus euphratica]
          Length = 1319

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
 Frame = -2

Query: 546  RTRARIGNRAAKINSDELESGES-DGKAEELMEEAHVDLEKHESSKDNKEPRKGRPA--- 379
            RTRARI N+ AKI+ ++ +   S D K EE           ++ S  N+E   G+PA   
Sbjct: 1006 RTRARIVNKPAKISVEKSDDSCSHDDKNEE-----------NDMSDGNEEIHIGKPAGGI 1054

Query: 378  -RTPYQGARARIGNRAVKINSDELESADSIDES---DGKEATEPMEETHFDLEKHESSED 211
             +    GA      RA  +N     S +  DES   D K             E++E SE 
Sbjct: 1055 TKKRKMGAGLARRTRACIVNKPAKISEEKPDESCCHDDKN------------EENEMSEG 1102

Query: 210  DKQPRRGRPARASTKRRKAAPKPCQRTRARIGKRAAKI----NPDELVNSDSVDEFDSKE 43
            + +   GRPA  STK+ K      +RTR RI  + AKI    + +  ++ D ++E +  E
Sbjct: 1103 NYEIHGGRPAGGSTKKGKIGAGQARRTRTRIANKPAKILEERSEESCLHDDEIEENEMNE 1162

Query: 42   ADE 34
             +E
Sbjct: 1163 ENE 1165


>dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1184

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
 Frame = -2

Query: 504  SDELESGESDGKAEELMEEAHVDLEKHESSK----------DNKEPRKGRPARTPYQGAR 355
            SD  ES +S+    E+  +     ++  SSK          + +  ++GR +    Q  +
Sbjct: 882  SDTEESDKSEHDTTEVASQGSAQTKEPASSKIAITSSRGRSNTRAVKRGRSSTNSLQRVQ 941

Query: 354  ARIGNRAVKINSDELESADSIDESDGKEATEPMEETHFDLEKHESSEDDKQPRRGRPARA 175
             R G +  KI+ DE E +D+ +E      ++  EET    E   +S   K  +RG+    
Sbjct: 942  RRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSFGEAQRNSSRGKCAKRGKSRVG 1001

Query: 174  STKRRKAAPKPCQRTRARIGKRAAKINPDELVNSDSVDEFDSKEAD 37
             T+R +         R+R GK+AAKI  DE   +D +D  ++  AD
Sbjct: 1002 QTQRVQ---------RSRRGKKAAKIGGDESDENDELDGNNNVSAD 1038


>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
            gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
            ligase 4; AltName: Full=DNA ligase IV; AltName:
            Full=Polydeoxyribonucleotide synthase [ATP] 4
            gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
            [Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
            ligase 4 [Arabidopsis thaliana]
          Length = 1219

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
 Frame = -2

Query: 504  SDELESGESDGKAEELMEEAHVDLEKHESSK----------DNKEPRKGRPARTPYQGAR 355
            SD  ES +S+    E+  +     ++  SSK          + +  ++GR +    Q  +
Sbjct: 917  SDTEESDKSEHDTTEVASQGSAQTKEPASSKIAITSSRGRSNTRAVKRGRSSTNSLQRVQ 976

Query: 354  ARIGNRAVKINSDELESADSIDESDGKEATEPMEETHFDLEKHESSEDDKQPRRGRPARA 175
             R G +  KI+ DE E +D+ +E      ++  EET    E   +S   K  +RG+    
Sbjct: 977  RRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSFGEAQRNSSRGKCAKRGKSRVG 1036

Query: 174  STKRRKAAPKPCQRTRARIGKRAAKINPDELVNSDSVDEFDSKEAD 37
             T+R +         R+R GK+AAKI  DE   +D +D  ++  AD
Sbjct: 1037 QTQRVQ---------RSRRGKKAAKIGGDESDENDELDGNNNVSAD 1073


>gb|KMZ60578.1| DNA ligase 4 [Zostera marina]
          Length = 1201

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
 Frame = -2

Query: 438  DLEKHESSKDNKEPRKGRPARTPYQGARARIGNRAVKINSDELESADSIDESDGKEATEP 259
            ++++ + S+ +K   K    +   +  R RI  R VKIN DE E     D S   +  +P
Sbjct: 932  EIDQRKRSRASKNHMKENMIKKTARRTRPRISTRHVKINPDESE-----DNSISDKKFQP 986

Query: 258  MEETHFDLEKHESSEDDK------------QPRRGRPARASTKRRKAAPKPCQRTRARIG 115
            ++++  D E+  S    +            Q +R  P+  S ++  A  KP +R R RI 
Sbjct: 987  VKDSDSDDEQQHSKRIKRPEMNKDHADIPDQRKRNEPSN-SHRKEIAITKPARRARPRIS 1045

Query: 114  KRAAKINPDELVNSDSVDEFDSKEADEPMLVTHFDLEK 1
             R  KINPDEL N   +D        +P++   FD EK
Sbjct: 1046 -RCVKINPDELENKSVLD-----RQSQPVIHFEFDDEK 1077