BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00025753
         (702 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008781116.1| PREDICTED: RNA polymerase II-associated prot...   291   4e-76
ref|XP_008781117.1| PREDICTED: RNA polymerase II-associated prot...   278   2e-72
ref|XP_008781119.1| PREDICTED: RNA polymerase II-associated prot...   276   7e-72
ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   263   6e-68
ref|XP_009416287.1| PREDICTED: RNA polymerase II-associated prot...   263   1e-67
ref|XP_009416278.1| PREDICTED: RNA polymerase II-associated prot...   263   1e-67
ref|XP_008808674.1| PREDICTED: RNA polymerase II-associated prot...   262   2e-67
ref|XP_009416296.1| PREDICTED: RNA polymerase II-associated prot...   257   6e-66
ref|XP_010938248.1| PREDICTED: RNA polymerase II-associated prot...   254   3e-65
ref|XP_010938247.1| PREDICTED: RNA polymerase II-associated prot...   254   3e-65
ref|XP_009416309.1| PREDICTED: RNA polymerase II-associated prot...   250   5e-64
ref|XP_009416301.1| PREDICTED: RNA polymerase II-associated prot...   250   5e-64
ref|XP_008808676.1| PREDICTED: RNA polymerase II-associated prot...   248   3e-63
ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfam...   243   1e-61
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   243   1e-61
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   243   1e-61
ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated prot...   242   1e-61
ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated prot...   242   1e-61
ref|XP_011466139.1| PREDICTED: RNA polymerase II-associated prot...   242   2e-61
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot...   242   2e-61

>ref|XP_008781116.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
           [Phoenix dactylifera]
          Length = 444

 Score =  291 bits (744), Expect = 4e-76
 Identities = 157/232 (67%), Positives = 179/232 (77%)
 Frame = +3

Query: 6   DREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSP 185
           D   +YL YSDA+ +   SF S+E++PDAASEKELGNEYFK+KK+ EAIECYSRSIALSP
Sbjct: 87  DERYNYLKYSDAMSRMRSSFYSEEKLPDAASEKELGNEYFKQKKFPEAIECYSRSIALSP 146

Query: 186 TSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSE 365
           TSVAFANRAMAY+K+KRFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KAS+EDSE
Sbjct: 147 TSVAFANRAMAYLKLKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASMEDSE 206

Query: 366 FGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHS 545
           F +RLEPNNQEL+KQ+TE + L EKEI KK S   K S Q   G  NS++  +  R  H 
Sbjct: 207 FAMRLEPNNQELKKQYTETKALYEKEIDKKISGPLKKSFQGIEGVSNSEMGTKNARGDHL 266

Query: 546 ILGNGSTAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
           +  N   AAAT+    S   Q VG RK  L  S+QDLASRAASRVMATA K+
Sbjct: 267 VSSNSQNAAATAHGAQSKKDQDVG-RKHVLKASMQDLASRAASRVMATAGKS 317


>ref|XP_008781117.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
           [Phoenix dactylifera]
          Length = 420

 Score =  278 bits (712), Expect = 2e-72
 Identities = 151/222 (68%), Positives = 173/222 (77%)
 Frame = +3

Query: 36  DAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFANRAM 215
           +A+ +   SF S+E++PDAASEKELGNEYFK+KK+ EAIECYSRSIALSPTSVAFANRAM
Sbjct: 73  NAMSRMRSSFYSEEKLPDAASEKELGNEYFKQKKFPEAIECYSRSIALSPTSVAFANRAM 132

Query: 216 AYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEPNNQ 395
           AY+K+KRFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KAS+EDSEF +RLEPNNQ
Sbjct: 133 AYLKLKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASMEDSEFAMRLEPNNQ 192

Query: 396 ELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGSTAAA 575
           EL+KQ+TE + L EKEI KK S   K S Q   G  NS++  +  R  H +  N   AAA
Sbjct: 193 ELKKQYTETKALYEKEIDKKISGPLKKSFQGIEGVSNSEMGTKNARGDHLVSSNSQNAAA 252

Query: 576 TSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
           T+    S   Q VG RK  L  S+QDLASRAASRVMATA K+
Sbjct: 253 TAHGAQSKKDQDVG-RKHVLKASMQDLASRAASRVMATAGKS 293


>ref|XP_008781119.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
           [Phoenix dactylifera]
          Length = 346

 Score =  276 bits (707), Expect = 7e-72
 Identities = 150/214 (70%), Positives = 169/214 (78%)
 Frame = +3

Query: 60  SFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFANRAMAYIKVKRF 239
           SF S+E++PDAASEKELGNEYFK+KK+ EAIECYSRSIALSPTSVAFANRAMAY+K+KRF
Sbjct: 7   SFYSEEKLPDAASEKELGNEYFKQKKFPEAIECYSRSIALSPTSVAFANRAMAYLKLKRF 66

Query: 240 EEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEPNNQELQKQHTE 419
           EEAENDCTEALNLDDRYVKAYSRRATARKELGK KAS+EDSEF +RLEPNNQEL+KQ+TE
Sbjct: 67  EEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASMEDSEFAMRLEPNNQELKKQYTE 126

Query: 420 GRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGSTAAATSLKTCSA 599
            + L EKEI KK S   K S Q   G  NS++  +  R  H +  N   AAAT+    S 
Sbjct: 127 TKALYEKEIDKKISGPLKKSFQGIEGVSNSEMGTKNARGDHLVSSNSQNAAATAHGAQSK 186

Query: 600 VHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
             Q VG RK  L  S+QDLASRAASRVMATA K+
Sbjct: 187 KDQDVG-RKHVLKASMQDLASRAASRVMATAGKS 219


>ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated
           protein 3 [Elaeis guineensis]
          Length = 471

 Score =  263 bits (673), Expect = 6e-68
 Identities = 156/270 (57%), Positives = 177/270 (65%), Gaps = 46/270 (17%)
 Frame = +3

Query: 30  YSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFANR 209
           YSDA+     SF S+E++PDAASEKELGNEYFK+KK+ EAIECYSRSIALSPTSVAFANR
Sbjct: 75  YSDAISHMPSSFYSEEKLPDAASEKELGNEYFKQKKFPEAIECYSRSIALSPTSVAFANR 134

Query: 210 AMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEPN 389
           AMAY+K+KRFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KAS+EDSEF  RLEPN
Sbjct: 135 AMAYLKLKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASMEDSEFATRLEPN 194

Query: 390 NQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGSTA 569
           NQEL+KQH+E + L EKEI+KK     K   Q  +G  NS++  +  R  HS+L N   A
Sbjct: 195 NQELRKQHSETKALYEKEISKKIRGPLKNPFQGIQGVSNSEMGTKNARGDHSVLSNAQNA 254

Query: 570 AA----TSLK----TCSAVHQAV--------------------GHR-------------- 623
           AA    T  K    TC     AV                    G R              
Sbjct: 255 AAAANGTQTKDGEGTCDQPLIAVKDTDSKSTDVGKETREYLLDGSREGAALSSNNAKKDQ 314

Query: 624 ----KQDLDTSVQDLASRAASRVMATAIKN 701
               KQ L  S++DLASRAASRVMATA K+
Sbjct: 315 DVGCKQVLKASMKDLASRAASRVMATAGKS 344


>ref|XP_009416287.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 444

 Score =  263 bits (671), Expect = 1e-67
 Identities = 138/227 (60%), Positives = 174/227 (76%)
 Frame = +3

Query: 21  YLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAF 200
           Y  Y+DA+GQ   S L+DE +PDAASEKELGNEYFK+K++LEAIECYSRSIALSPTSVAF
Sbjct: 88  YSKYTDAIGQIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECYSRSIALSPTSVAF 147

Query: 201 ANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRL 380
           ANRAMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KASLED++F +RL
Sbjct: 148 ANRAMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDADFAVRL 207

Query: 381 EPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNG 560
           +PN QEL+KQ++E + L EKE+A + S A K + +  +  D   +  +  +  + I    
Sbjct: 208 DPNTQELRKQYSEIKALYEKEVANRKSGALKEASKESQRADGLQVESKIIQDDYLISNRV 267

Query: 561 STAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
             AAA+S K+    ++ V H K +L  S+ D+ASRAASR +A+A KN
Sbjct: 268 HNAAASSHKSSVVKNERVQH-KHELKASLHDVASRAASRAVASAAKN 313


>ref|XP_009416278.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 448

 Score =  263 bits (671), Expect = 1e-67
 Identities = 138/227 (60%), Positives = 174/227 (76%)
 Frame = +3

Query: 21  YLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAF 200
           Y  Y+DA+GQ   S L+DE +PDAASEKELGNEYFK+K++LEAIECYSRSIALSPTSVAF
Sbjct: 92  YSKYTDAIGQIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECYSRSIALSPTSVAF 151

Query: 201 ANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRL 380
           ANRAMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KASLED++F +RL
Sbjct: 152 ANRAMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDADFAVRL 211

Query: 381 EPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNG 560
           +PN QEL+KQ++E + L EKE+A + S A K + +  +  D   +  +  +  + I    
Sbjct: 212 DPNTQELRKQYSEIKALYEKEVANRKSGALKEASKESQRADGLQVESKIIQDDYLISNRV 271

Query: 561 STAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
             AAA+S K+    ++ V H K +L  S+ D+ASRAASR +A+A KN
Sbjct: 272 HNAAASSHKSSVVKNERVQH-KHELKASLHDVASRAASRAVASAAKN 317


>ref|XP_008808674.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Phoenix dactylifera] gi|672177176|ref|XP_008808675.1|
           PREDICTED: RNA polymerase II-associated protein 3
           isoform X1 [Phoenix dactylifera]
          Length = 416

 Score =  262 bits (669), Expect = 2e-67
 Identities = 146/232 (62%), Positives = 169/232 (72%)
 Frame = +3

Query: 6   DREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSP 185
           D   +YL Y DAV   S SF S+E++PDAASEKELGNEYFK+K +LEAIECYSRSIALSP
Sbjct: 51  DERYNYLKYPDAVSHMSSSFYSEEKLPDAASEKELGNEYFKQKMFLEAIECYSRSIALSP 110

Query: 186 TSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSE 365
            SVAFANRA+AY+K+KRFEEAE+DCTEALNLDDRYVKAYSRRATARKELGK KASLEDSE
Sbjct: 111 MSVAFANRAVAYLKLKRFEEAESDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDSE 170

Query: 366 FGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHS 545
           FG+RLEPNNQEL+KQ+T  + L EK+   K      I   A   TD+         ++  
Sbjct: 171 FGMRLEPNNQELRKQYTATKALYEKDSKGKTHNQPLI---AVNDTDSESTEKETRERLLD 227

Query: 546 ILGNGSTAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
               G  A  +S    +   Q VGH KQ+L  S+QDLASRAASRVMATA K+
Sbjct: 228 ESREG--AGLSSSNAITKKDQVVGH-KQELKASMQDLASRAASRVMATADKS 276


>ref|XP_009416296.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 440

 Score =  257 bits (656), Expect = 6e-66
 Identities = 138/227 (60%), Positives = 172/227 (75%)
 Frame = +3

Query: 21  YLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAF 200
           Y  Y+DA+GQ   S L+DE +PDAASEKELGNEYFK+K++LEAIECYSRSIALSPTSVAF
Sbjct: 92  YSKYTDAIGQIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECYSRSIALSPTSVAF 151

Query: 201 ANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRL 380
           ANRAMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KASLED++F +RL
Sbjct: 152 ANRAMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDADFAVRL 211

Query: 381 EPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNG 560
           +PN QEL+KQ++E + L EKE+A + S A K + +  +  D   +  +  +  + I    
Sbjct: 212 DPNTQELRKQYSEIKALYEKEVANRKSGALKEASKESQRADGLQVESKIIQDDYLISNRV 271

Query: 561 STAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
             AAA+S K+ S VH        +L  S+ D+ASRAASR +A+A KN
Sbjct: 272 HNAAASSHKS-SVVH--------ELKASLHDVASRAASRAVASAAKN 309


>ref|XP_010938248.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
           [Elaeis guineensis]
          Length = 419

 Score =  254 bits (650), Expect = 3e-65
 Identities = 143/233 (61%), Positives = 168/233 (72%), Gaps = 1/233 (0%)
 Frame = +3

Query: 6   DREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSP 185
           D   +YL Y DAV   S +F S+ER+PDAASEKELGNEYFK+K++LEAIECYSRSIALSP
Sbjct: 54  DERYNYLKYPDAVSHMSSNFYSEERLPDAASEKELGNEYFKQKRFLEAIECYSRSIALSP 113

Query: 186 TSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSE 365
           TSVAFANRAMAY+K+KRFEEAEN+CTEALNLDDRYVKAYSRRATARKELGK  AS+EDSE
Sbjct: 114 TSVAFANRAMAYLKLKRFEEAENECTEALNLDDRYVKAYSRRATARKELGKLIASMEDSE 173

Query: 366 FGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGT-DNSDIAMRGGRKVH 542
           F +RLEPNNQEL+KQ+TE + L EK          KI  Q   G  D    +     + H
Sbjct: 174 FAMRLEPNNQELRKQYTETKALYEK------GSKGKIPDQPLIGVMDTDSKSTEKQTREH 227

Query: 543 SILGNGSTAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
            +  +   A  +S    +   Q VG  + +L  S+QDLASRAASRVMATA K+
Sbjct: 228 LLDESRGGAGQSSHNAITKKDQGVG-CQHELKASMQDLASRAASRVMATAGKS 279


>ref|XP_010938247.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
           [Elaeis guineensis]
          Length = 452

 Score =  254 bits (650), Expect = 3e-65
 Identities = 143/233 (61%), Positives = 168/233 (72%), Gaps = 1/233 (0%)
 Frame = +3

Query: 6   DREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSP 185
           D   +YL Y DAV   S +F S+ER+PDAASEKELGNEYFK+K++LEAIECYSRSIALSP
Sbjct: 87  DERYNYLKYPDAVSHMSSNFYSEERLPDAASEKELGNEYFKQKRFLEAIECYSRSIALSP 146

Query: 186 TSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSE 365
           TSVAFANRAMAY+K+KRFEEAEN+CTEALNLDDRYVKAYSRRATARKELGK  AS+EDSE
Sbjct: 147 TSVAFANRAMAYLKLKRFEEAENECTEALNLDDRYVKAYSRRATARKELGKLIASMEDSE 206

Query: 366 FGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGT-DNSDIAMRGGRKVH 542
           F +RLEPNNQEL+KQ+TE + L EK          KI  Q   G  D    +     + H
Sbjct: 207 FAMRLEPNNQELRKQYTETKALYEK------GSKGKIPDQPLIGVMDTDSKSTEKQTREH 260

Query: 543 SILGNGSTAAATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
            +  +   A  +S    +   Q VG  + +L  S+QDLASRAASRVMATA K+
Sbjct: 261 LLDESRGGAGQSSHNAITKKDQGVG-CQHELKASMQDLASRAASRVMATAGKS 312


>ref|XP_009416309.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5 [Musa
           acuminata subsp. malaccensis]
          Length = 408

 Score =  250 bits (639), Expect = 5e-64
 Identities = 133/224 (59%), Positives = 169/224 (75%)
 Frame = +3

Query: 30  YSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFANR 209
           Y +   +   S L+DE +PDAASEKELGNEYFK+K++LEAIECYSRSIALSPTSVAFANR
Sbjct: 55  YKEPPRKIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECYSRSIALSPTSVAFANR 114

Query: 210 AMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEPN 389
           AMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KASLED++F +RL+PN
Sbjct: 115 AMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDADFAVRLDPN 174

Query: 390 NQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGSTA 569
            QEL+KQ++E + L EKE+A + S A K + +  +  D   +  +  +  + I      A
Sbjct: 175 TQELRKQYSEIKALYEKEVANRKSGALKEASKESQRADGLQVESKIIQDDYLISNRVHNA 234

Query: 570 AATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
           AA+S K+    ++ V H K +L  S+ D+ASRAASR +A+A KN
Sbjct: 235 AASSHKSSVVKNERVQH-KHELKASLHDVASRAASRAVASAAKN 277


>ref|XP_009416301.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4 [Musa
           acuminata subsp. malaccensis]
          Length = 412

 Score =  250 bits (639), Expect = 5e-64
 Identities = 133/224 (59%), Positives = 169/224 (75%)
 Frame = +3

Query: 30  YSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFANR 209
           Y +   +   S L+DE +PDAASEKELGNEYFK+K++LEAIECYSRSIALSPTSVAFANR
Sbjct: 59  YKEPPRKIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECYSRSIALSPTSVAFANR 118

Query: 210 AMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEPN 389
           AMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KASLED++F +RL+PN
Sbjct: 119 AMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDADFAVRLDPN 178

Query: 390 NQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGSTA 569
            QEL+KQ++E + L EKE+A + S A K + +  +  D   +  +  +  + I      A
Sbjct: 179 TQELRKQYSEIKALYEKEVANRKSGALKEASKESQRADGLQVESKIIQDDYLISNRVHNA 238

Query: 570 AATSLKTCSAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
           AA+S K+    ++ V H K +L  S+ D+ASRAASR +A+A KN
Sbjct: 239 AASSHKSSVVKNERVQH-KHELKASLHDVASRAASRAVASAAKN 281


>ref|XP_008808676.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Phoenix dactylifera] gi|672177180|ref|XP_008808677.1|
           PREDICTED: RNA polymerase II-associated protein 3
           isoform X2 [Phoenix dactylifera]
          Length = 351

 Score =  248 bits (633), Expect = 3e-63
 Identities = 139/216 (64%), Positives = 161/216 (74%)
 Frame = +3

Query: 54  SCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFANRAMAYIKVK 233
           S SF S+E++PDAASEKELGNEYFK+K +LEAIECYSRSIALSP SVAFANRA+AY+K+K
Sbjct: 2   SSSFYSEEKLPDAASEKELGNEYFKQKMFLEAIECYSRSIALSPMSVAFANRAVAYLKLK 61

Query: 234 RFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEPNNQELQKQH 413
           RFEEAE+DCTEALNLDDRYVKAYSRRATARKELGK KASLEDSEFG+RLEPNNQEL+KQ+
Sbjct: 62  RFEEAESDCTEALNLDDRYVKAYSRRATARKELGKLKASLEDSEFGMRLEPNNQELRKQY 121

Query: 414 TEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGSTAAATSLKTC 593
           T  + L EK+   K      I   A   TD+         ++      G  A  +S    
Sbjct: 122 TATKALYEKDSKGKTHNQPLI---AVNDTDSESTEKETRERLLDESREG--AGLSSSNAI 176

Query: 594 SAVHQAVGHRKQDLDTSVQDLASRAASRVMATAIKN 701
           +   Q VGH KQ+L  S+QDLASRAASRVMATA K+
Sbjct: 177 TKKDQVVGH-KQELKASMQDLASRAASRVMATADKS 211


>ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 5 [Theobroma cacao] gi|508719767|gb|EOY11664.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 5 [Theobroma cacao]
          Length = 389

 Score =  243 bits (619), Expect = 1e-61
 Identities = 132/235 (56%), Positives = 164/235 (69%), Gaps = 2/235 (0%)
 Frame = +3

Query: 3   SDREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALS 182
           S R+  YL   D     S SF+++E +PDAASEKELGNEYFK+KK+ EAI+CYSRSI LS
Sbjct: 32  SSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLS 91

Query: 183 PTSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDS 362
           PT+VA ANRAMAY+K+K+F+EAE+DCTEALNLDDRY+KAYSRRATARKELGK K S+ED+
Sbjct: 92  PTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDT 151

Query: 363 EFGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVH 542
           EF LRLEPNNQE++KQH E + L EKEI +K S   + S Q  +    S+     G  +H
Sbjct: 152 EFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSE-TKENGLGMH 210

Query: 543 SILGNGSTAAATSLKTCSAVHQAVGH--RKQDLDTSVQDLASRAASRVMATAIKN 701
           S     ++   T + T         +  RK +L  SVQ+LAS AA+R MA A KN
Sbjct: 211 SA---SNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASLAATRAMAEAAKN 262


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  243 bits (619), Expect = 1e-61
 Identities = 132/235 (56%), Positives = 164/235 (69%), Gaps = 2/235 (0%)
 Frame = +3

Query: 3   SDREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALS 182
           S R+  YL   D     S SF+++E +PDAASEKELGNEYFK+KK+ EAI+CYSRSI LS
Sbjct: 64  SSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLS 123

Query: 183 PTSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDS 362
           PT+VA ANRAMAY+K+K+F+EAE+DCTEALNLDDRY+KAYSRRATARKELGK K S+ED+
Sbjct: 124 PTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDT 183

Query: 363 EFGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVH 542
           EF LRLEPNNQE++KQH E + L EKEI +K S   + S Q  +    S+     G  +H
Sbjct: 184 EFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSE-TKENGLGMH 242

Query: 543 SILGNGSTAAATSLKTCSAVHQAVGH--RKQDLDTSVQDLASRAASRVMATAIKN 701
           S     ++   T + T         +  RK +L  SVQ+LAS AA+R MA A KN
Sbjct: 243 SA---SNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASLAATRAMAEAAKN 294


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  243 bits (619), Expect = 1e-61
 Identities = 132/235 (56%), Positives = 164/235 (69%), Gaps = 2/235 (0%)
 Frame = +3

Query: 3   SDREKHYLNYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALS 182
           S R+  YL   D     S SF+++E +PDAASEKELGNEYFK+KK+ EAI+CYSRSI LS
Sbjct: 65  SSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLS 124

Query: 183 PTSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDS 362
           PT+VA ANRAMAY+K+K+F+EAE+DCTEALNLDDRY+KAYSRRATARKELGK K S+ED+
Sbjct: 125 PTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDT 184

Query: 363 EFGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVH 542
           EF LRLEPNNQE++KQH E + L EKEI +K S   + S Q  +    S+     G  +H
Sbjct: 185 EFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSE-TKENGLGMH 243

Query: 543 SILGNGSTAAATSLKTCSAVHQAVGH--RKQDLDTSVQDLASRAASRVMATAIKN 701
           S     ++   T + T         +  RK +L  SVQ+LAS AA+R MA A KN
Sbjct: 244 SA---SNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASLAATRAMAEAAKN 295


>ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Nelumbo nucifera]
          Length = 484

 Score =  242 bits (618), Expect = 1e-61
 Identities = 143/260 (55%), Positives = 178/260 (68%), Gaps = 27/260 (10%)
 Frame = +3

Query: 3   SDREKHYLNYS---DAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSI 173
           S   K+  ++S   DAV + S S+L+ E  PDA SEKELGNEYFK+KK+ EAI+CYSRSI
Sbjct: 98  SRNSKYRFDFSRNFDAVNKLSSSYLNAEDSPDATSEKELGNEYFKQKKFNEAIDCYSRSI 157

Query: 174 ALSPTSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASL 353
           AL PT+VA+ANRAMAY+K+KRFEEAE+DCTEALNLDDRY+KAYSRRATARKELGK KA++
Sbjct: 158 ALMPTAVAYANRAMAYLKIKRFEEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKAAI 217

Query: 354 EDSEFGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAK--ISGQA------KRGTDN- 506
           ED+EF LRLEPNNQEL+KQ+ E + L +KEI KK S  A+  I G+        +GTD  
Sbjct: 218 EDAEFALRLEPNNQELKKQYAESKALYDKEILKKASGIARNAIQGETAAQVDRMKGTDGK 277

Query: 507 ---------SDIAMR---GGRKVHSILGNGSTAAAT---SLKTCSAVHQAVGHRKQDLDT 641
                     +I  +   GG +      +GS   AT   S  T    H     ++++L T
Sbjct: 278 FPSKPSIIVQEIKSKTTVGGTRSWIKESDGSQEDATLKSSADTFKGSHAV--DKREELKT 335

Query: 642 SVQDLASRAASRVMATAIKN 701
           SVQ+LASRAASR MA A+KN
Sbjct: 336 SVQELASRAASRAMAEAVKN 355


>ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Nelumbo nucifera]
          Length = 489

 Score =  242 bits (618), Expect = 1e-61
 Identities = 143/260 (55%), Positives = 178/260 (68%), Gaps = 27/260 (10%)
 Frame = +3

Query: 3   SDREKHYLNYS---DAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSI 173
           S   K+  ++S   DAV + S S+L+ E  PDA SEKELGNEYFK+KK+ EAI+CYSRSI
Sbjct: 103 SRNSKYRFDFSRNFDAVNKLSSSYLNAEDSPDATSEKELGNEYFKQKKFNEAIDCYSRSI 162

Query: 174 ALSPTSVAFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASL 353
           AL PT+VA+ANRAMAY+K+KRFEEAE+DCTEALNLDDRY+KAYSRRATARKELGK KA++
Sbjct: 163 ALMPTAVAYANRAMAYLKIKRFEEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKAAI 222

Query: 354 EDSEFGLRLEPNNQELQKQHTEGRQLLEKEIAKKNSRAAK--ISGQA------KRGTDN- 506
           ED+EF LRLEPNNQEL+KQ+ E + L +KEI KK S  A+  I G+        +GTD  
Sbjct: 223 EDAEFALRLEPNNQELKKQYAESKALYDKEILKKASGIARNAIQGETAAQVDRMKGTDGK 282

Query: 507 ---------SDIAMR---GGRKVHSILGNGSTAAAT---SLKTCSAVHQAVGHRKQDLDT 641
                     +I  +   GG +      +GS   AT   S  T    H     ++++L T
Sbjct: 283 FPSKPSIIVQEIKSKTTVGGTRSWIKESDGSQEDATLKSSADTFKGSHAV--DKREELKT 340

Query: 642 SVQDLASRAASRVMATAIKN 701
           SVQ+LASRAASR MA A+KN
Sbjct: 341 SVQELASRAASRAMAEAVKN 360


>ref|XP_011466139.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  242 bits (617), Expect = 2e-61
 Identities = 133/226 (58%), Positives = 164/226 (72%), Gaps = 1/226 (0%)
 Frame = +3

Query: 27  NYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFAN 206
           NY + +   S SF S++ +PDAASEK+LGNEYFK+KK+ EAI+CYSRSIAL+PT+VAFAN
Sbjct: 50  NY-EPMNTVSSSFTSEDGLPDAASEKDLGNEYFKQKKFKEAIDCYSRSIALTPTAVAFAN 108

Query: 207 RAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEP 386
           RAM+YIK+KRF+EAENDCTEALNLDDRY+KAYSRRATARKELGK K S+ED+EF LRLEP
Sbjct: 109 RAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRLEP 168

Query: 387 NNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGST 566
           +NQE++KQ+ E + L EK I +K S A KIS Q K+  + S   + G    HSI    ST
Sbjct: 169 HNQEIKKQYAEAKSLYEKGILQKVSGAIKISEQDKQKVEKSGTTVNG----HSIQPVSST 224

Query: 567 AAATSLKTCSAVHQAVG-HRKQDLDTSVQDLASRAASRVMATAIKN 701
              T         + +  + KQ    SVQ+LASRAASR  A A +N
Sbjct: 225 TQRTETTAVGDHTKKINTNGKQASKLSVQELASRAASRAKALAAEN 270


>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Fragaria vesca subsp. vesca]
          Length = 407

 Score =  242 bits (617), Expect = 2e-61
 Identities = 133/226 (58%), Positives = 164/226 (72%), Gaps = 1/226 (0%)
 Frame = +3

Query: 27  NYSDAVGQFSCSFLSDERIPDAASEKELGNEYFKRKKYLEAIECYSRSIALSPTSVAFAN 206
           NY + +   S SF S++ +PDAASEK+LGNEYFK+KK+ EAI+CYSRSIAL+PT+VAFAN
Sbjct: 60  NY-EPMNTVSSSFTSEDGLPDAASEKDLGNEYFKQKKFKEAIDCYSRSIALTPTAVAFAN 118

Query: 207 RAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASLEDSEFGLRLEP 386
           RAM+YIK+KRF+EAENDCTEALNLDDRY+KAYSRRATARKELGK K S+ED+EF LRLEP
Sbjct: 119 RAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRLEP 178

Query: 387 NNQELQKQHTEGRQLLEKEIAKKNSRAAKISGQAKRGTDNSDIAMRGGRKVHSILGNGST 566
           +NQE++KQ+ E + L EK I +K S A KIS Q K+  + S   + G    HSI    ST
Sbjct: 179 HNQEIKKQYAEAKSLYEKGILQKVSGAIKISEQDKQKVEKSGTTVNG----HSIQPVSST 234

Query: 567 AAATSLKTCSAVHQAVG-HRKQDLDTSVQDLASRAASRVMATAIKN 701
              T         + +  + KQ    SVQ+LASRAASR  A A +N
Sbjct: 235 TQRTETTAVGDHTKKINTNGKQASKLSVQELASRAASRAKALAAEN 280