BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00025089
         (589 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIC77183.1| polyprotein [Gossypium barbadense]                     306   4e-81
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   284   3e-74
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   283   3e-74
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   283   5e-74
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   283   5e-74
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...   282   1e-73
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   281   1e-73
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   281   1e-73
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         281   2e-73
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   281   2e-73
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   280   3e-73
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      280   4e-73
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         280   5e-73
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   280   5e-73
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             279   8e-73
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   278   1e-72
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   278   1e-72
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   278   1e-72
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   278   1e-72
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle...   278   2e-72

>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  306 bits (785), Expect = 4e-81
 Identities = 150/199 (75%), Positives = 174/199 (87%), Gaps = 4/199 (2%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LPEGH PIGVKWVYKTKTN++GKVEKYKARLVA GY QR+G+DY+E+FA VARI
Sbjct: 885  TWELTSLPEGHSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARI 944

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            DTIRL+IA+A Q +WKIYQMDVK+ FLNGYL  EVYI+QPPGY ++ +EDKVY+LKK+LY
Sbjct: 945  DTIRLLIAVAAQYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLY 1004

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKD-GDIMIVCLYVDGMIFTGNNPKM 57
             LKQAPRAWN RID YF+ NGF +SP+E++LYTKK   GDIMIVCLYVD MIFTGNNP M
Sbjct: 1005 GLKQAPRAWNTRIDEYFRRNGFIKSPHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGM 1064

Query: 56   F-EFKKNMIKEFKMTDIGE 3
              +FKK M KEF+MTDIGE
Sbjct: 1065 SDDFKKAMTKEFEMTDIGE 1083


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  284 bits (726), Expect = 3e-74
 Identities = 137/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YK RLVA GYCQR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  283 bits (725), Expect = 3e-74
 Identities = 138/197 (70%), Positives = 162/197 (82%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+TFLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  283 bits (724), Expect = 5e-74
 Identities = 138/197 (70%), Positives = 162/197 (82%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 866  TWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARL 925

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 926  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 985

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 986  GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMF 1045

Query: 53   -EFKKNMIKEFKMTDIG 6
             EFKK M KEF+MTDIG
Sbjct: 1046 EEFKKEMTKEFEMTDIG 1062


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  283 bits (724), Expect = 5e-74
 Identities = 138/197 (70%), Positives = 162/197 (82%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 834  TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 893

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 894  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 953

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 954  GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMF 1013

Query: 53   -EFKKNMIKEFKMTDIG 6
             EFKK M KEF+MTDIG
Sbjct: 1014 EEFKKEMTKEFEMTDIG 1030


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  282 bits (721), Expect = 1e-73
 Identities = 135/197 (68%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YK RLVA GYCQR GIDY+EVFA +AR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPIARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP +F
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSIF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  281 bits (720), Expect = 1e-73
 Identities = 137/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  281 bits (720), Expect = 1e-73
 Identities = 137/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  281 bits (719), Expect = 2e-73
 Identities = 136/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+E+FA VAR+
Sbjct: 363 TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARL 422

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKK LY
Sbjct: 423 ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLY 482

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 483 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMF 542

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 543 EEFKKEMTKEFEMTDIG 559


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  281 bits (719), Expect = 2e-73
 Identities = 136/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+E+FA VAR+
Sbjct: 866  TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARL 925

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKK LY
Sbjct: 926  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLY 985

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 986  GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMF 1045

Query: 53   -EFKKNMIKEFKMTDIG 6
             EFKK M KEF+MTDIG
Sbjct: 1046 EEFKKEMTKEFEMTDIG 1062


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  280 bits (717), Expect = 3e-73
 Identities = 136/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPR+WN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRSWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  280 bits (716), Expect = 4e-73
 Identities = 136/197 (69%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA Q  W+I+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF E GF + PYE++LY K ++ DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFNEKGFIKCPYEHALYIKTQNNDILIACLYVDDLIFTGNNPIMF 206

Query: 53  E-FKKNMIKEFKMTDIG 6
           E FKK M KEF+MTDIG
Sbjct: 207 EDFKKEMTKEFEMTDIG 223


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  280 bits (715), Expect = 5e-73
 Identities = 136/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 866  TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARL 925

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKK LY
Sbjct: 926  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLY 985

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP +F
Sbjct: 986  GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIF 1045

Query: 53   -EFKKNMIKEFKMTDIG 6
             EFKK M KEF+MTDIG
Sbjct: 1046 EEFKKEMTKEFEMTDIG 1062


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  280 bits (715), Expect = 5e-73
 Identities = 136/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 866  TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARL 925

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKK LY
Sbjct: 926  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLY 985

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP +F
Sbjct: 986  GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIF 1045

Query: 53   -EFKKNMIKEFKMTDIG 6
             EFKK M KEF+MTDIG
Sbjct: 1046 EEFKKEMTKEFEMTDIG 1062


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  279 bits (713), Expect = 8e-73
 Identities = 136/197 (69%), Positives = 159/197 (80%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWELT+LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 805  TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 864

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA QN+WKI+QMD K  FLNG    EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 865  ETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALY 924

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 925  GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMF 984

Query: 53   -EFKKNMIKEFKMTDIG 6
             EFKK M KEF+MTDIG
Sbjct: 985  EEFKKEMTKEFEMTDIG 1001


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  278 bits (711), Expect = 1e-72
 Identities = 135/197 (68%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 870  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 929

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA Q  W+I+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 930  ETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 989

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E GF + PYE++LY K ++ DI+I CLYVD +IFTGNNP MF
Sbjct: 990  GLKQAPRAWNTRIDKYFKEKGFIKCPYEHALYIKTQNNDILIACLYVDDLIFTGNNPIMF 1049

Query: 53   E-FKKNMIKEFKMTDIG 6
            E FK  M KEF+MTDIG
Sbjct: 1050 EDFKMEMTKEFEMTDIG 1066



 Score =  276 bits (707), Expect = 4e-72
 Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587  TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
            TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 2209 TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 2268

Query: 407  DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
            +T+RLII+LA Q  W+I+QMDVK+ FLNG L  EVYI+QP GY+++ +EDKV +LKKALY
Sbjct: 2269 ETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVEGEEDKVLRLKKALY 2328

Query: 233  ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
             LKQAPRAWN RID YF+E GF + PYE++LY K ++ DI+I CLYVD +IFTGNNP MF
Sbjct: 2329 GLKQAPRAWNTRIDKYFKEKGFIKCPYEHALYIKTQNNDILIACLYVDDLIFTGNNPIMF 2388

Query: 53   E-FKKNMIKEFKMTDIG 6
            E FK  M KEF+MTDIG
Sbjct: 2389 EDFKMEMTKEFEMTDIG 2405


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  278 bits (711), Expect = 1e-72
 Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL TLP GHK IGVKWVYK K N  G+VE+YKARLVA GY Q+ GIDY+EVFA VAR+
Sbjct: 27  TWELATLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQKAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKK LY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKTLY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K ++ D++I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKKFIKCPYEHALYIKIQNNDLLIACLYVDDLIFTGNNPNMF 206

Query: 53  E-FKKNMIKEFKMTDIG 6
           E FK  M KEF+MTDIG
Sbjct: 207 ELFKMEMTKEFEMTDIG 223


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  278 bits (711), Expect = 1e-72
 Identities = 135/197 (68%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RI+ YF++  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRINKYFKKKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  278 bits (711), Expect = 1e-72
 Identities = 136/197 (69%), Positives = 159/197 (80%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLVA GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +EDKV +LKKALY
Sbjct: 87  ETVRLIILLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +   I+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDGILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223


>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  278 bits (710), Expect = 2e-72
 Identities = 135/197 (68%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
 Frame = -3

Query: 587 TWELTTLPEGHKPIGVKWVYKTKTNQDGKVEKYKARLVA*GYCQREGIDYEEVFAQVARI 408
           TWEL +LP GHK IGVKWVYK K N  G+VE+YKARLV  GY QR GIDY+EVFA VAR+
Sbjct: 27  TWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVVKGYSQRAGIDYDEVFALVARL 86

Query: 407 DTIRLIIALATQNRWKIYQMDVKTTFLNGYL--EVYIKQPPGYVMKNQEDKVYKLKKALY 234
           +T+RLII+LA QN+WKI+QMDVK+ FLNG L  EVYI+QP GY++K +E+KV +LKKALY
Sbjct: 87  ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLKKALY 146

Query: 233 ELKQAPRAWNVRIDAYFQENGFQQSPYEYSLYTKKKDGDIMIVCLYVDGMIFTGNNPKMF 54
            LKQAPRAWN RID YF+E  F + PYE++LY K +  DI+I CLYVD +IFTGNNP MF
Sbjct: 147 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLYVDDLIFTGNNPSMF 206

Query: 53  -EFKKNMIKEFKMTDIG 6
            EFKK M KEF+MTDIG
Sbjct: 207 EEFKKEMTKEFEMTDIG 223