BLASTX nr result

ID: Ophiopogon21_contig00024921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00024921
         (480 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009593913.1| PREDICTED: uncharacterized protein LOC104090...    50   4e-07
ref|XP_009605135.1| PREDICTED: uncharacterized protein LOC104099...    51   6e-07
ref|XP_010684010.1| PREDICTED: uncharacterized protein LOC104898...    49   3e-06

>ref|XP_009593913.1| PREDICTED: uncharacterized protein LOC104090513 [Nicotiana
           tomentosiformis]
          Length = 241

 Score = 49.7 bits (117), Expect(2) = 4e-07
 Identities = 42/113 (37%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
 Frame = +1

Query: 55  K*RSASRNLCDCKIPMKLKRKLYK----------ERCFVVQYRAIKKHVSKMSMTKMRML 204
           K R AS  LCD  +P+KLK K YK            C+ V+      HV KM++ +MRML
Sbjct: 113 KWRLASGVLCDKNVPLKLKGKFYKVVVRLTMLYGAECWPVK----NSHVQKMTVVEMRML 168

Query: 205 RWIVVI*KR*DKK*VHL**VRXXXXXXXXXXXXXXRKKIRENRLRCFGYVQRR 363
           RW+     R DK       +R                K+RE RLR FGYV+RR
Sbjct: 169 RWMCGH-TRLDK-------IR-NEVIRDKVGLAPVEDKMREARLRWFGYVKRR 212



 Score = 30.8 bits (68), Expect(2) = 4e-07
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 365 ISVPVSRNDSSVVNGVRRTRDRPKRTW 445
           I  P+ R +  V+ G+RR R RPK++W
Sbjct: 214 IEAPIRRCERLVLVGIRRGRGRPKKSW 240


>ref|XP_009605135.1| PREDICTED: uncharacterized protein LOC104099750 [Nicotiana
           tomentosiformis]
          Length = 190

 Score = 50.8 bits (120), Expect(2) = 6e-07
 Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
 Frame = +1

Query: 55  K*RSASRNLCDCKIPMKLKRKLYK----------ERCFVVQYRAIKKHVSKMSMTKMRML 204
           K R AS  LCD K+P K K + Y+            C+ V+      H+ KM +T+MRML
Sbjct: 2   KWRLASSVLCDKKVPPKFKDRFYRAVVRPAMLYGSECWPVKIA----HIQKMKVTEMRML 57

Query: 205 RWIVVI*KR*DKK*VHL**VRXXXXXXXXXXXXXXRKKIRENRLRCFGYVQRR 363
           RW+                                  K+RE RLRCFG+VQRR
Sbjct: 58  RWM------------------CGHTIQARVGVAPMEDKMREVRLRCFGHVQRR 92



 Score = 29.3 bits (64), Expect(2) = 6e-07
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 365 ISVPVSRNDSSVVNGVRRTRDRPKRTWMKAIKKNM 469
           +   V R +   + G+RR R RPK+ W + I+++M
Sbjct: 94  LDASVRRCERLALTGMRRGRGRPKKYWGEVIRQDM 128


>ref|XP_010684010.1| PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris
           subsp. vulgaris]
          Length = 357

 Score = 48.5 bits (114), Expect(2) = 3e-06
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
 Frame = +1

Query: 55  K*RSASRNLCDCKIPMKLKRKLYKERC-----FVVQYRAIKK-HVSKMSMTKMRMLRWIV 216
           K +SA+  LCD  IP +LK K Y+        +  +  A+K+ HV KM++ +MRMLRW+ 
Sbjct: 196 KWKSATGFLCDSGIPQRLKGKFYRTAIRPALLYGTECWAVKQCHVHKMNVAEMRMLRWMC 255

Query: 217 VI*KR*DKK*VHL**VRXXXXXXXXXXXXXXRKKIRENRLRCFGYVQRR 363
               R D+                        +K+RENRLR FG+V+RR
Sbjct: 256 GH-TRKDR--------LRNEVIREKVGVASIEEKMRENRLRWFGHVKRR 295



 Score = 28.9 bits (63), Expect(2) = 3e-06
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 374 PVSRNDSSVVNGVRRTRDRPKRTWMKAIKKNMK 472
           PV R +    N + + R RPK TW++ I+ +M+
Sbjct: 300 PVRRIEEWRSNQIVKGRGRPKMTWLRVIESDMR 332


Top