BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00024792
         (1166 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polyme...   445   e-122
ref|XP_010913557.1| PREDICTED: probable RNA-dependent RNA polyme...   435   e-119
ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polyme...   424   e-116
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi...   422   e-115
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   421   e-115
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   417   e-114
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [F...   415   e-113
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...   414   e-113
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...   413   e-112
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   412   e-112
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin...   412   e-112
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   412   e-112
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...   410   e-112
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   410   e-112
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   410   e-111
ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [G...   407   e-111
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              407   e-111
ref|XP_013457822.1| RNA-dependent RNA polymerase family protein ...   407   e-110
ref|XP_003608944.2| RNA-dependent RNA polymerase family protein ...   405   e-110
ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   404   e-110

>ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix
            dactylifera]
          Length = 1117

 Score =  445 bits (1144), Expect = e-122
 Identities = 220/344 (63%), Positives = 268/344 (77%), Gaps = 4/344 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+R+L+AVY+ +LDN MGLVDC+VFPQKG+RPHPNECSGGDLDGDL+ + WDE+L
Sbjct: 773  CLHPGDVRILQAVYNPQLDN-MGLVDCIVFPQKGRRPHPNECSGGDLDGDLYFVCWDEKL 831

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PPK   PMDY +RR R  DH +TLEE+ KFF+DYM+ND LG ISTAHLV+ADSEP KA 
Sbjct: 832  IPPKMDTPMDYNARRQRHTDHDVTLEEIQKFFVDYMINDTLGIISTAHLVYADSEPGKAQ 891

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LANLHSMAVD+AKTG+ AEM + L+P  FPDFMER  ++ Y S GVLGKLYRAA
Sbjct: 892  SPKCLELANLHSMAVDFAKTGSSAEMPRILKPKMFPDFMERWDRTMYVSTGVLGKLYRAA 951

Query: 624  TSHAKCSQNCMDITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDIT 454
            + H +   N   +  E +P   YD DLE+ GFEAFL+VAE++YNQY++ LS+LMKYY   
Sbjct: 952  SRHIE-RPNTDPMDAEMLPQSAYDHDLEIKGFEAFLEVAEDYYNQYSERLSSLMKYYGAE 1010

Query: 453  YEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAA 277
            +EDEILTG +RSR MYL  DK+KY +MKDR+LI V+ L KE +GWFKSSC ESE   +A+
Sbjct: 1011 HEDEILTGNLRSRSMYLQRDKKKYGEMKDRILIGVKSLHKEVQGWFKSSCVESESLRMAS 1070

Query: 276  AWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKANDN*EGS 145
            AWYHVTYH  Y  S  RFLSFPW + D LL  KASK++    G+
Sbjct: 1071 AWYHVTYHPSYY-SENRFLSFPWILSDALLSIKASKSHKRQAGA 1113


>ref|XP_010913557.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score =  435 bits (1119), Expect = e-119
 Identities = 215/345 (62%), Positives = 268/345 (77%), Gaps = 5/345 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVL+AVY+ +LDN MGLVDC+VFPQ+G+RPHP+ECSGGDLDGDL+ + WDE+L
Sbjct: 773  CLHPGDVRVLQAVYNPQLDN-MGLVDCIVFPQRGRRPHPSECSGGDLDGDLYFVCWDEKL 831

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PPKT  PMDY +RR R  DH +TLEE+ KFF+DYM+ND LG ISTAHLV+AD EP KA 
Sbjct: 832  IPPKTDTPMDYYARRQRHTDHDVTLEEIQKFFVDYMINDTLGVISTAHLVYADREPAKAR 891

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LANLHSMAVD+AKTG+ AEM + LRP +FPDFMER  +  Y S G+LGKLYR+A
Sbjct: 892  SPKCLQLANLHSMAVDFAKTGSSAEMPRILRPKEFPDFMERWDRPMYVSTGILGKLYRSA 951

Query: 624  TSH-AKCSQNCMDITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
            +SH  + + + MD   E +P   YD DL+V GFEAFL+VAE++ N Y++ LS+LM YY  
Sbjct: 952  SSHIERPNTDLMDA--EMLPQSAYDYDLQVSGFEAFLEVAEDYRNMYSERLSSLMNYYGA 1009

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
             +EDEILTG +RSR MYL  DK+KY +MKDR+L+ V+ L KE +GWFK SC+ESE   +A
Sbjct: 1010 EHEDEILTGNLRSRSMYLQRDKKKYGEMKDRILLGVKSLHKEVQGWFKRSCAESESLRMA 1069

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKANDN*EGS 145
            +AWYHVTYH  Y  S  RFLSFPW + D LL  KASK++    G+
Sbjct: 1070 SAWYHVTYHPSYY-SENRFLSFPWILSDALLSIKASKSHKRQRGA 1113


>ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1106

 Score =  424 bits (1089), Expect = e-116
 Identities = 205/337 (60%), Positives = 259/337 (76%), Gaps = 1/337 (0%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVL+AVYD  LD+ MGLVDC++FPQKG RPHPNECSGGDLDGDL+ + WD+ L
Sbjct: 773  CLHPGDIRVLQAVYDVGLDD-MGLVDCIIFPQKGTRPHPNECSGGDLDGDLYFVCWDKNL 831

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PP+T  PMDY  RR R+MDH +TLEE+ KFF+DYM+ND LG IST HL++ADSEP KA 
Sbjct: 832  IPPETDTPMDYTPRRPRLMDHDVTLEEIQKFFVDYMINDTLGVISTTHLIYADSEPTKAR 891

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LANLHS AVD+AKTGAPAEM + LRP +FPDFMER  +ST+ S GV+GKLYRAA
Sbjct: 892  SPKCLELANLHSEAVDFAKTGAPAEMPRVLRPKEFPDFMERWDRSTFISPGVIGKLYRAA 951

Query: 624  TSHAKCSQNCMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITYED 445
            + H +   +   I+ +   YD DL+V+GFE FL  A+E+Y++Y++ LS LM YY   +ED
Sbjct: 952  SIHFEDVNSDATIS-KVSAYDYDLQVEGFEEFLSPAKEYYDRYSEKLSLLMNYYGAEHED 1010

Query: 444  EILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAAWY 268
            EILTG +R++ +YL  DK++Y +MKDR+L+ VR LQ+E EGWF+ SC+E +   +A+AWY
Sbjct: 1011 EILTGNLRNKSLYLQKDKKRYGEMKDRMLVGVRSLQQEVEGWFRCSCAERDSSRMASAWY 1070

Query: 267  HVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKANDN 157
            HVTYH  Y      FLSFPW + DVLL  KA K + N
Sbjct: 1071 HVTYHRDYHPE-TTFLSFPWILSDVLLNIKAVKKHKN 1106


>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
            gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
            2 [Morus notabilis]
          Length = 1115

 Score =  422 bits (1085), Expect = e-115
 Identities = 203/341 (59%), Positives = 247/341 (72%), Gaps = 5/341 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEAVYD KL+   GLVDCLVFPQKG+RPHPNECSGGDLDGDLF I WD  L
Sbjct: 776  CLHPGDVRVLEAVYDAKLEEE-GLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDTNL 834

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PP+T APMDYI RR R+MDH +TLEE+ KFF+DYM+ND LG ISTAHL+HAD EP+KA 
Sbjct: 835  IPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPEKAF 894

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S  CL+LA LHSMAVD+AKTGAPAEM + LRP  +PDFMERL +  Y SNG LGKLYRA 
Sbjct: 895  SENCLQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRAT 954

Query: 624  TSHAKCSQNCMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
                  SQ   ++ W        YD DLEV+GFE F+ +AE H + Y D ++ +M YY++
Sbjct: 955  VESE--SQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYEL 1012

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
              EDE+LTG +R R  YL  D R+Y ++KDR+L+AV+ LQ+EA+GWF+ SC   E   +A
Sbjct: 1013 ESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKMA 1072

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKANDN 157
            +AWYHVTYH  Y       LSFPW   D+LL  K+  +  N
Sbjct: 1073 SAWYHVTYHPNYYQKSINCLSFPWIKGDILLNIKSINSQRN 1113


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cicer arietinum]
          Length = 1122

 Score =  421 bits (1082), Expect = e-115
 Identities = 205/334 (61%), Positives = 252/334 (75%), Gaps = 4/334 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVL+A+Y+ +L+   GL DCLVFPQKG RPHPNECSGGDLDGDLF I WD+ L
Sbjct: 784  CLHPGDIRVLDAIYNEELEE-KGLRDCLVFPQKGPRPHPNECSGGDLDGDLFFISWDKDL 842

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PP+T  PMDY  RR R+MDHK+TLEE+H+FF+DYM+ND LGAISTAHLVHAD EP+KA 
Sbjct: 843  IPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREPEKAR 902

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRA- 628
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  K  Y SNGVLGKLYRA 
Sbjct: 903  SRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGKLYRAL 962

Query: 627  --ATSHAKCSQNCMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDIT 454
              +T+  + S   +   +    YD  LEV+GFEAFL+ A  H   YA  +S+LM +YD  
Sbjct: 963  VESTTQVR-SNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSFYDAE 1021

Query: 453  YEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAA 277
             EDE+LTG +++R  YL  D R+Y DMKDR+LI+V+ LQ+EA+ WF+S C   E+  +A+
Sbjct: 1022 TEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFESDCQPHEYQLMAS 1081

Query: 276  AWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            AWYHVTYH KYS     FLSFPW + D+LL  K+
Sbjct: 1082 AWYHVTYHPKYSHESSTFLSFPWIVGDILLHIKS 1115


>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
          Length = 1117

 Score =  417 bits (1073), Expect = e-114
 Identities = 205/336 (61%), Positives = 250/336 (74%), Gaps = 3/336 (0%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEA++  +L+   GLVDCL+FPQKG RPH NECSGGDLDGDL+ I WDE L
Sbjct: 778  CLHPGDVRVLEAIFHVELEE-KGLVDCLIFPQKGPRPHTNECSGGDLDGDLYFISWDENL 836

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PPKT APMDY  RR R+MDH +TLEE+ KFF+DYM+ND LGAISTAHLVHAD EP KAL
Sbjct: 837  IPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKAL 896

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  K  Y S+ VLGKLYRAA
Sbjct: 897  SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956

Query: 624  TSHAKCSQNCMDITWEAIP--YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 451
                +  ++ +  + EA    YD DLEVDGFEAFL++AE +   Y + +S LM YY   Y
Sbjct: 957  IKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016

Query: 450  EDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAA 274
            EDEIL G +RSR  YL  D RKY DMKDR+L++V+ L+KE + WF++SC   +   +A+A
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSCDPHQRRMMASA 1076

Query: 273  WYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKA 166
            WYHVTYH  Y      + SFPWA+ DVLL  KA+ +
Sbjct: 1077 WYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKATNS 1112


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp.
            vesca]
          Length = 1136

 Score =  415 bits (1066), Expect = e-113
 Identities = 203/335 (60%), Positives = 253/335 (75%), Gaps = 5/335 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVLEAVYD  L+    +VDC++FPQKG+RPHPNECSGGDLDGDLF I WD+ L
Sbjct: 781  CLHPGDIRVLEAVYDVGLEE-KNMVDCILFPQKGERPHPNECSGGDLDGDLFFISWDKSL 839

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PP TV PMDY +RR R MDH +TLEE+ KFF+DYM+NDNLGAISTAHLVH+D EP+KA+
Sbjct: 840  IPPTTVPPMDYSARRPRNMDHDVTLEEIQKFFVDYMINDNLGAISTAHLVHSDHEPEKAM 899

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA+LHSMAVD+AKTGAPAE+S  L+P +FPDFMER+ +  Y SNG LGKLYRA 
Sbjct: 900  SKKCLELADLHSMAVDFAKTGAPAELSWILKPKEFPDFMERVERPMYISNGALGKLYRAI 959

Query: 624  TSHAKCSQNCMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
             S     Q    + W        YD +LEV GFE+FL++AE H ++Y + + +LM YY+ 
Sbjct: 960  RSSVVQEQTI--VVWSQQRAEEAYDRELEVQGFESFLEMAESHRDKYIEKMRSLMNYYEA 1017

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
            T EDEILTG +R+R  YL  D R+Y D+KDR+L++++ LQKEA+GWF+SSC  SE   LA
Sbjct: 1018 TTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLSLKTLQKEAKGWFESSCKVSEQQRLA 1077

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            +AWYHVTY+  Y       LSFPW + D+LL  K+
Sbjct: 1078 SAWYHVTYNLAYFQEDMNCLSFPWIVGDILLNIKS 1112


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
            gi|462407047|gb|EMJ12511.1| hypothetical protein
            PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  414 bits (1064), Expect = e-113
 Identities = 203/335 (60%), Positives = 247/335 (73%), Gaps = 5/335 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPNECSGGDLDGDLF I WD+ L
Sbjct: 779  CLHPGDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDL 837

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            VP  TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDNLGAISTAHLVHAD EPDKAL
Sbjct: 838  VPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKAL 897

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            + KCL+LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFMER+ K  Y SNG LGKLYRA 
Sbjct: 898  NPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAV 957

Query: 624  TSHAKCSQNCMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
                   Q   ++ W        YD DLEVDG E+ L+VA+ H + Y + +  +M YY  
Sbjct: 958  V--GSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGA 1015

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
              EDEILTG +R+R  YL  D R+Y DMKDR+ ++++ LQKEA+G F+SSC  SE   +A
Sbjct: 1016 VTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRMA 1075

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            +AWYHVTYH  Y       LSFPW + D+LL  KA
Sbjct: 1076 SAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1110


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
            hypothetical protein Csa_1G005580 [Cucumis sativus]
          Length = 1117

 Score =  413 bits (1062), Expect = e-112
 Identities = 204/333 (61%), Positives = 246/333 (73%), Gaps = 3/333 (0%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEA++  +L+   GLVDCL+FPQKG RPH NECSGGDLDGDL+ I WDE L
Sbjct: 778  CLHPGDVRVLEAIFHVELEE-KGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENL 836

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +PPKT APMDY  RR R+MDH + LEE+ KFF+DYM+ND LGAISTAHLVHAD EP KAL
Sbjct: 837  IPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKAL 896

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  K  Y S+ VLGKLYRAA
Sbjct: 897  SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956

Query: 624  TSHAKCSQNCMDITWEAIP--YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 451
                +  ++ +  + EA    YD DLEVDGFEAFL++AE +   Y + +S LM YY   Y
Sbjct: 957  VKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016

Query: 450  EDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAA 274
            EDEIL G +RSR  YL  D RKY DMKDR+L++V+ L+KE + WF++SC       +A+A
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASA 1076

Query: 273  WYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            WYHVTYH  Y      + SFPWA+ DVLL  KA
Sbjct: 1077 WYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKA 1109


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
            gi|720051127|ref|XP_010271988.1| PREDICTED: RNA-dependent
            RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score =  412 bits (1059), Expect = e-112
 Identities = 203/341 (59%), Positives = 246/341 (72%), Gaps = 5/341 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVL+A+Y+  L+   GLVDCLVFPQKG+RPHPNECSGGDLDGDLF + WDE L
Sbjct: 778  CLHPGDIRVLDAIYESALEE-KGLVDCLVFPQKGERPHPNECSGGDLDGDLFFVCWDENL 836

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDYI RR R+MDH++TLEE+ K+F++YM+ND LG ISTAH++HAD EP KA 
Sbjct: 837  IPSQTDTPMDYIGRRSRLMDHEVTLEEIQKYFVNYMINDTLGVISTAHVIHADREPSKAR 896

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P ++PDFMER  +  Y S G+LGKLYR+ 
Sbjct: 897  SPKCLQLAALHSMAVDFAKTGAPAEMPRVLKPKEYPDFMERGDRPMYASPGILGKLYRST 956

Query: 624  TSHAKCSQNCMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
                K  +   D  W        YD DLEV GFE+F++ AE H   Y + LS LM YY  
Sbjct: 957  IDSTKNQE--PDFVWNEEVAQAAYDKDLEVRGFESFVETAESHKKLYTEKLSTLMNYYGA 1014

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
              EDEILTG +RS  + L  DK +Y +MKDRVLIAVR LQKEA+GWF SSC   E   +A
Sbjct: 1015 RSEDEILTGNLRSPSLCLQRDKIRYGEMKDRVLIAVRNLQKEAKGWFHSSCKSHECHKMA 1074

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKANDN 157
            +AWYHVTYH KY  +G   LSFPW + D+LL  K+ K   N
Sbjct: 1075 SAWYHVTYHPKYCHNGMNSLSFPWILDDILLNIKSVKKMRN 1115


>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
          Length = 1131

 Score =  412 bits (1058), Expect = e-112
 Identities = 206/339 (60%), Positives = 243/339 (71%), Gaps = 9/339 (2%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEAVY+ KL+     VDC++FPQKG+RPHPNECSGGDLDGD+F I WD  L
Sbjct: 794  CLHPGDVRVLEAVYEMKLEE-KDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWDNDL 852

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDY  RR R+MDH +TLEE+HKFF+DYM+ND LGAISTAHLVHAD +PDKA 
Sbjct: 853  IPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPDKAR 912

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S+KCL LA LHSMAVD+AKTGAPAEM   L+P +FPDFMER  K  Y S GVLGKLYRA 
Sbjct: 913  SSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRAT 972

Query: 624  TSHAKCSQNCMDITWEAI--------PYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMK 469
                    + M I   AI         YD DLEVDGFEAFL VAE H   Y + ++ALM 
Sbjct: 973  L------DSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMN 1026

Query: 468  YYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEF 292
            YY  + EDEILTG +R+R  YL  D R+Y DMKDR+L++ + LQ EA+ WF SSC E+E 
Sbjct: 1027 YYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKENEH 1086

Query: 291  PGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            P LA+AWYHVTY   Y       LSFPW + D+LL  K+
Sbjct: 1087 PQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKS 1125


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score =  412 bits (1058), Expect = e-112
 Identities = 206/339 (60%), Positives = 243/339 (71%), Gaps = 9/339 (2%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEAVY+ KL+     VDC++FPQKG+RPHPNECSGGDLDGD+F I WD  L
Sbjct: 794  CLHPGDVRVLEAVYEMKLEE-KDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWDNDL 852

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDY  RR R+MDH +TLEE+HKFF+DYM+ND LGAISTAHLVHAD +PDKA 
Sbjct: 853  IPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPDKAR 912

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S+KCL LA LHSMAVD+AKTGAPAEM   L+P +FPDFMER  K  Y S GVLGKLYRA 
Sbjct: 913  SSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRAT 972

Query: 624  TSHAKCSQNCMDITWEAI--------PYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMK 469
                    + M I   AI         YD DLEVDGFEAFL VAE H   Y + ++ALM 
Sbjct: 973  L------DSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMN 1026

Query: 468  YYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEF 292
            YY  + EDEILTG +R+R  YL  D R+Y DMKDR+L++ + LQ EA+ WF SSC E+E 
Sbjct: 1027 YYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKENEH 1086

Query: 291  PGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            P LA+AWYHVTY   Y       LSFPW + D+LL  K+
Sbjct: 1087 PQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKS 1125


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
            [Prunus mume]
          Length = 1100

 Score =  410 bits (1055), Expect = e-112
 Identities = 202/335 (60%), Positives = 246/335 (73%), Gaps = 5/335 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPNECSGGDLDGDLF I WD+ L
Sbjct: 761  CLHPGDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDL 819

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            VP  TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDNLGAISTAHLVHAD EPDKAL
Sbjct: 820  VPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKAL 879

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            + KCL+LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFMER+ K  Y SNG LGKLYRA 
Sbjct: 880  NPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAV 939

Query: 624  TSHAKCSQNCMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
                   Q   ++ W        YD DLEVDG E+ L+VA+ H + Y + +  +M  Y  
Sbjct: 940  V--GSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDTYIEKMRTIMNNYGA 997

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
              EDEILTG +R+R  YL  D R+Y DMKDR+ ++++ LQKEA+G F+SSC  SE   +A
Sbjct: 998  VTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGMFESSCPVSEHQRMA 1057

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            +AWYHVTYH  Y       LSFPW + D+LL  KA
Sbjct: 1058 SAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1092


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score =  410 bits (1055), Expect = e-112
 Identities = 203/340 (59%), Positives = 246/340 (72%), Gaps = 5/340 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVLEAVY+ +L+   GLVDC++FPQKG+RPHPNECSGGDLDGD F I WD+ L
Sbjct: 628  CLHPGDIRVLEAVYEVELEE-KGLVDCILFPQKGERPHPNECSGGDLDGDQFFISWDKGL 686

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T +PMDY  RR R MDH +TLEE+ KFFIDYM+ND LGAISTAHLVHAD EPDKA 
Sbjct: 687  IPGETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAISTAHLVHADREPDKAR 746

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S+KCL+LA LHSMAVD+AKTGAPAEM K L+P +FPDFMER+ K  Y S GVLGKLYR  
Sbjct: 747  SSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGT 806

Query: 624  TSHAKCSQNCMDITW----EAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
                +  Q      W        YD DLEV GFE F+++A  H + Y + LS LM YY+ 
Sbjct: 807  LDSTR--QQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEA 864

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
              EDEILTG ++++ MYL  D R+Y D KDR+LI+V+ LQKEA+ WF+S C   E   LA
Sbjct: 865  KKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLA 924

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKAND 160
            +AWYHVTYH  Y   G   LSFPW + D+LL  K++ + +
Sbjct: 925  SAWYHVTYHPSYFQEGITCLSFPWIVADILLNIKSANSKN 964


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score =  410 bits (1053), Expect = e-111
 Identities = 202/346 (58%), Positives = 254/346 (73%), Gaps = 10/346 (2%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVL+AVY+ +L+   GLVDC++FPQKG+RPHPNECSGGDLDGD F I WDE L
Sbjct: 778  CLHPGDIRVLDAVYEVELEE-KGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGL 836

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T APMDY SRR R+MDH +TLEE+ KFF+DYM+ND LG ISTAHLVHAD EP+KA 
Sbjct: 837  IPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKAR 896

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER+ K  Y SNG LGKLYR A
Sbjct: 897  SKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYR-A 955

Query: 624  TSHAKCSQNCMDITWEAIP---YDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDIT 454
            T  ++ ++    +    IP   YD DLEVDGFE FL++A+ H   YA+ ++ LM +Y   
Sbjct: 956  TIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAE 1015

Query: 453  YEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAA 277
             EDE+LTG +R++ MYL  D R++ +MKDR+LI+V+ LQKEA+ W   SC   +   +A+
Sbjct: 1016 SEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMAS 1075

Query: 276  AWYHVTYHTKYSGSGQRFLSFPWAICDVLL------RNKASKANDN 157
            AWYHVTYH+ +S     FLSFPW + +VLL        KA  + DN
Sbjct: 1076 AWYHVTYHSTFSSQTPNFLSFPWIVGEVLLVIKSANSRKAETSKDN 1121


>ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [Gossypium raimondii]
            gi|763786137|gb|KJB53208.1| hypothetical protein
            B456_008G296900 [Gossypium raimondii]
          Length = 1147

 Score =  407 bits (1046), Expect = e-111
 Identities = 200/334 (59%), Positives = 251/334 (75%), Gaps = 4/334 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEAVY+ +L+   GLVDCLVFPQKG+RPHPNECSGGDLDGD F I WD+ L
Sbjct: 778  CLHPGDVRVLEAVYEPQLEE-KGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDL 836

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDY  RR R+MDH++TLEE+ KFF+DYM+ND LGAISTAHLVHAD EPDKA 
Sbjct: 837  IPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKAC 896

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S  CL LA LHSMAVD+AKTGAPAEM + L+P +FPDFM+R  K  Y S+GVLGKLYRA 
Sbjct: 897  SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956

Query: 624  TSHAKCSQNCMDITWE--AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 451
             +    +++    T E   + YD DLEV+GFE+ + VAE H   Y + +S LM YYD+ Y
Sbjct: 957  INSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016

Query: 450  EDEILTGYVRSR-QMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSES-EFPGLAA 277
            EDEILTG + ++ Q  L D R+Y +MK+R++++V+ LQ+EA+ WFKSSCS++ E   LA+
Sbjct: 1017 EDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLAS 1076

Query: 276  AWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            AWY+VTYH  Y       LSFPW + D+LLR K+
Sbjct: 1077 AWYYVTYHPNYFQERMNSLSFPWIVGDILLRVKS 1110


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  407 bits (1046), Expect = e-111
 Identities = 200/334 (59%), Positives = 251/334 (75%), Gaps = 4/334 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEAVY+ +L+   GLVDCLVFPQKG+RPHPNECSGGDLDGD F I WD+ L
Sbjct: 778  CLHPGDVRVLEAVYEPQLEE-KGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDL 836

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDY  RR R+MDH++TLEE+ KFF+DYM+ND LGAISTAHLVHAD EPDKA 
Sbjct: 837  IPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKAC 896

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S  CL LA LHSMAVD+AKTGAPAEM + L+P +FPDFM+R  K  Y S+GVLGKLYRA 
Sbjct: 897  SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956

Query: 624  TSHAKCSQNCMDITWE--AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 451
             +    +++    T E   + YD DLEV+GFE+ + VAE H   Y + +S LM YYD+ Y
Sbjct: 957  INSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016

Query: 450  EDEILTGYVRSR-QMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSES-EFPGLAA 277
            EDEILTG + ++ Q  L D R+Y +MK+R++++V+ LQ+EA+ WFKSSCS++ E   LA+
Sbjct: 1017 EDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLAS 1076

Query: 276  AWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKA 175
            AWY+VTYH  Y       LSFPW + D+LLR K+
Sbjct: 1077 AWYYVTYHPNYFQERMNSLSFPWIVGDILLRVKS 1110


>ref|XP_013457822.1| RNA-dependent RNA polymerase family protein [Medicago truncatula]
            gi|657390297|gb|KEH31853.1| RNA-dependent RNA polymerase
            family protein [Medicago truncatula]
          Length = 1123

 Score =  407 bits (1045), Expect = e-110
 Identities = 202/336 (60%), Positives = 244/336 (72%), Gaps = 3/336 (0%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVL+AVY  +L+   GL DCLVFPQKG RPHPNECSGGDLDGDLF I WD+ L
Sbjct: 785  CLHPGDIRVLDAVYSEELEE-KGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDL 843

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDY  RR R+MDHK+TLEE+H+FF+DYM+ND LGAISTAHLVHAD E DKA 
Sbjct: 844  IPAQTENPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREHDKAK 903

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  K  Y S GVLGKLYRA 
Sbjct: 904  SRKCLELAELHSMAVDFAKTGAPAEMPRSLKPREFPDFMERFEKPMYISKGVLGKLYRAT 963

Query: 624  --TSHAKCSQNCMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 451
              ++        M   +    YD  LEVDGFE FL+ A  H + YA  + +LM +Y  T 
Sbjct: 964  IDSNLQVRFDMVMSEKFAKEAYDHQLEVDGFEVFLETALSHRDMYAQKMISLMSFYGATT 1023

Query: 450  EDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAA 274
            EDE+LTG +++R  YL  D R+Y DMKDR+LI+V+ LQ EA+ WF+S C   E+  +A+A
Sbjct: 1024 EDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQLEAKEWFESDCQPHEYQLMASA 1083

Query: 273  WYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKASKA 166
            WYHVTYH KY      FLSFPW + D+LL  K++ A
Sbjct: 1084 WYHVTYHPKYYIESSTFLSFPWIVGDILLHIKSANA 1119


>ref|XP_003608944.2| RNA-dependent RNA polymerase family protein [Medicago truncatula]
            gi|657390296|gb|AES91141.2| RNA-dependent RNA polymerase
            family protein [Medicago truncatula]
          Length = 1277

 Score =  405 bits (1041), Expect = e-110
 Identities = 201/334 (60%), Positives = 243/334 (72%), Gaps = 3/334 (0%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGDIRVL+AVY  +L+   GL DCLVFPQKG RPHPNECSGGDLDGDLF I WD+ L
Sbjct: 785  CLHPGDIRVLDAVYSEELEE-KGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDL 843

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T  PMDY  RR R+MDHK+TLEE+H+FF+DYM+ND LGAISTAHLVHAD E DKA 
Sbjct: 844  IPAQTENPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREHDKAK 903

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  K  Y S GVLGKLYRA 
Sbjct: 904  SRKCLELAELHSMAVDFAKTGAPAEMPRSLKPREFPDFMERFEKPMYISKGVLGKLYRAT 963

Query: 624  --TSHAKCSQNCMDITWEAIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDITY 451
              ++        M   +    YD  LEVDGFE FL+ A  H + YA  + +LM +Y  T 
Sbjct: 964  IDSNLQVRFDMVMSEKFAKEAYDHQLEVDGFEVFLETALSHRDMYAQKMISLMSFYGATT 1023

Query: 450  EDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLAAA 274
            EDE+LTG +++R  YL  D R+Y DMKDR+LI+V+ LQ EA+ WF+S C   E+  +A+A
Sbjct: 1024 EDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQLEAKEWFESDCQPHEYQLMASA 1083

Query: 273  WYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKAS 172
            WYHVTYH KY      FLSFPW + D+LL  K++
Sbjct: 1084 WYHVTYHPKYYIESSTFLSFPWIVGDILLHIKSA 1117



 Score =  138 bits (347), Expect = 1e-29
 Identities = 67/102 (65%), Positives = 80/102 (78%)
 Frame = -3

Query: 933  VMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDY 754
            ++ H  +  ++HKFF+DYM+ D LGAISTAHLVHAD E +KA S KCL+LA LHSMAVD+
Sbjct: 1110 ILLHIKSANKIHKFFVDYMIKDTLGAISTAHLVHADCESNKAKSRKCLELAELHSMAVDF 1169

Query: 753  AKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRA 628
            AKTGA AEM + L+P +FPDFMER  K  Y S GVLGKLYRA
Sbjct: 1170 AKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRA 1211


>ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Jatropha
            curcas]
          Length = 940

 Score =  404 bits (1038), Expect = e-110
 Identities = 199/336 (59%), Positives = 241/336 (71%), Gaps = 5/336 (1%)
 Frame = -3

Query: 1164 CLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSGGDLDGDLFSIYWDERL 985
            CLHPGD+RVLEAVY+  L+   GLVDC++FPQKG+RPHPNECSGGDLDGDLF I WDE L
Sbjct: 601  CLHPGDVRVLEAVYEVGLEE-KGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDEDL 659

Query: 984  VPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAISTAHLVHADSEPDKAL 805
            +P +T +PMDY+ RR R+MDH + LEE+HKFF+DYM+ND LGAISTAHLVHAD EPDKA 
Sbjct: 660  IPSQTESPMDYLGRRPRIMDHDVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPDKAR 719

Query: 804  STKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGKSTYKSNGVLGKLYRAA 625
            S KCLKLA LHSMAVD+AKTGAPAEM + L+P +FPDFMER  KSTY S+ VLGKLYR  
Sbjct: 720  SRKCLKLAELHSMAVDFAKTGAPAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLYRGT 779

Query: 624  TSHAKCSQNCMDITWE----AIPYDSDLEVDGFEAFLQVAEEHYNQYADSLSALMKYYDI 457
                   Q      W        YD +LEV+GF  F+ +A  H   Y + LS LM YY+ 
Sbjct: 780  LD--STLQGRTKFIWSEKIAEATYDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYEA 837

Query: 456  TYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFKSSCSESEFPGLA 280
              EDE+LTG +R++ MYL  D R+Y D KDR+L++++ LQKEA+ WF+SSC  S    LA
Sbjct: 838  KNEDEMLTGNLRNKAMYLQRDNRRYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCLA 897

Query: 279  AAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNKAS 172
            +AWYHVT H  Y   G   L FPW + D+LL  K +
Sbjct: 898  SAWYHVTCHPNYFQEGITCLGFPWIVGDILLNIKTA 933