BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00013469
         (3168 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008793802.1| PREDICTED: chloroplastic group IIA intron sp...   568   0.0  
ref|XP_010928535.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   530   0.0  
ref|XP_009419882.1| PREDICTED: chloroplastic group IIA intron sp...   564   0.0  
ref|XP_008793805.1| PREDICTED: chloroplastic group IIA intron sp...   568   0.0  
ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron sp...   504   0.0  
ref|XP_012082331.1| PREDICTED: chloroplastic group IIA intron sp...   485   0.0  
ref|XP_011625144.1| PREDICTED: chloroplastic group IIA intron sp...   482   0.0  
ref|XP_011625143.1| PREDICTED: chloroplastic group IIA intron sp...   482   0.0  
ref|XP_009762860.1| PREDICTED: chloroplastic group IIA intron sp...   486   0.0  
ref|XP_009614930.1| PREDICTED: chloroplastic group IIA intron sp...   484   0.0  
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp...   468   0.0  
ref|XP_008341495.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   476   0.0  
gb|KDO72354.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   479   0.0  
gb|KNA24276.1| hypothetical protein SOVF_017130 [Spinacia oleracea]   468   0.0  
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   475   0.0  
gb|KDO72351.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   479   0.0  
gb|ERN10689.1| hypothetical protein AMTR_s00028p00245370 [Ambore...   482   0.0  
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   475   0.0  
ref|XP_011625145.1| PREDICTED: chloroplastic group IIA intron sp...   482   0.0  
gb|KDO72355.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   479   0.0  

>ref|XP_008793802.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Phoenix dactylifera]
            gi|672139996|ref|XP_008793803.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Phoenix dactylifera]
            gi|672139998|ref|XP_008793804.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Phoenix dactylifera]
          Length = 1052

 Score =  568 bits (1465), Expect(2) = 0.0
 Identities = 291/397 (73%), Positives = 317/397 (79%), Gaps = 2/397 (0%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRIS+KLRSLGYL               GSAGEIFIPTP E+PK RVGHTIDSSWSTPE
Sbjct: 65   IQRISEKLRSLGYLADEPTKSADRPPTGPGSAGEIFIPTPHEIPKRRVGHTIDSSWSTPE 124

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            +PVPEPG+G  ++RF  LW                  VP VAELTI  E LKRLR  GIR
Sbjct: 125  HPVPEPGSGGTITRFNYLWSREKEQEKEKKASKEV--VPTVAELTIPAEVLKRLRSEGIR 182

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            L+KRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCR+NMKRTHEILERKTGGLVVWR
Sbjct: 183  LQKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRMNMKRTHEILERKTGGLVVWR 242

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTAAINPLAK 746
            SGSIIILYRGA+YKYPYF  GDQ+  N+D++S + SM D    +Q  N+     +   + 
Sbjct: 243  SGSIIILYRGANYKYPYFHYGDQMRKNVDEVSPESSMEDGALDKQGVNSMPACIVKSSSG 302

Query: 747  APNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVDADL 926
            +    + S LVIGVGSPNKVRLQ  GE QLEEEADRLLDGLGPRFT+WWGY+PLPVDADL
Sbjct: 303  SFATSAQSFLVIGVGSPNKVRLQQPGEAQLEEEADRLLDGLGPRFTNWWGYDPLPVDADL 362

Query: 927  LPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSMIKL 1106
            LPAI+PGFRKPFRLLPFG+KPKLTDREMTILRRLSR LPCHFALGRNRN QGLAVSMIKL
Sbjct: 363  LPAIVPGFRKPFRLLPFGIKPKLTDREMTILRRLSRHLPCHFALGRNRNHQGLAVSMIKL 422

Query: 1107 WEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            WEKCEVAKIA+KRGVQNTNSE+M EELKQLTGG LLS
Sbjct: 423  WEKCEVAKIAIKRGVQNTNSELMAEELKQLTGGTLLS 459



 Score =  508 bits (1309), Expect(2) = 0.0
 Identities = 316/624 (50%), Positives = 394/624 (63%), Gaps = 19/624 (3%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSS-VHTTXXXXXXXXXXXXVDELTDATEETKSVTIKS 1434
            AVS AIEERRN  +   +Q++     V T              DE     EE ++++ + 
Sbjct: 477  AVSLAIEERRNGGIGIKRQNTDGRGRVATIDAPELEFVRAASADEPHGKAEEKRALSTER 536

Query: 1435 KLKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
            + + A   ++RVE KL Q +++KEKAE+LL  LE  V    VESD+E I+ EERYMLRKV
Sbjct: 537  RPRTA---LERVETKLFQVMEEKEKAEKLLKELEKPVEPLKVESDKEGISEEERYMLRKV 593

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRM+PFLLLGRRGVFAGTVENMHLHWKYREL+KIISKD  IE+VE AAR LEAESGGIL
Sbjct: 594  GLRMQPFLLLGRRGVFAGTVENMHLHWKYRELIKIISKDRCIENVERAARILEAESGGIL 653

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERV+KGHAIIVYRGKNY+RP +LRP+TLLSK+ AMKRSLEAQR  SLKL VL+LSRN
Sbjct: 654  VAVERVSKGHAIIVYRGKNYKRPSNLRPQTLLSKREAMKRSLEAQRSKSLKLRVLNLSRN 713

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            ID L+HQM                 S+V+D   E S                    +QLT
Sbjct: 714  IDRLKHQM-----------------SQVKDGSLEDS--------------------VQLT 736

Query: 2155 ESNKSEVKDEMNDRSWSIVRD-NGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEE 2331
            E  +     E ND+S S + D NGSA+ +F QE+ EEV+   +E +HS +HG   +  E 
Sbjct: 737  EHERISSAAETNDQSGSTLEDRNGSADFTFQQESAEEVHEIHSESMHSKDHGH--NSREN 794

Query: 2332 STITSNNDNWVA--------------LKQADERSKNEDVQLATES---ANMADSDSRYIS 2460
              I +   N V                K   E S+ E V+  +++    N+ +++S   S
Sbjct: 795  GEIVNEPSNVVGSAFPLNSLEHKLMISKHEHENSETEVVRSLSDTRNDTNILNNESGCTS 854

Query: 2461 DESEFLPEFCLQQEQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLE 2640
                F    C Q+ Q S S T+ +   +     + S    +   D  +H D L+  S +E
Sbjct: 855  VGPAFHLGICPQEAQASCSTTNNIVH-NPSKGLDSSLVATRREPDSMVHGDILEQESAVE 913

Query: 2641 NPFRAAPLSNRERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKG 2820
             PF+A+PLSNRERLILRKQALKMR RPVLAVGR+N ++GVAKTIKTHFKKHPLAIVNIK 
Sbjct: 914  IPFKASPLSNRERLILRKQALKMRNRPVLAVGRNNAISGVAKTIKTHFKKHPLAIVNIKH 973

Query: 2821 RAEGTSVQEVIFELEQATGAVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGARE 3000
            RA+GT VQE+IFELEQATGAVLVSREPNKVILYRGWGE ETPG     K+V    G ++ 
Sbjct: 974  RAKGTPVQELIFELEQATGAVLVSREPNKVILYRGWGERETPG---GVKEVKPSKGDSK- 1029

Query: 3001 EKKVCPELIEAIRVECGLSTSRME 3072
               V  +L+ AIR+ECGL T+ ++
Sbjct: 1030 -GTVPSQLMAAIRLECGLQTNDLK 1052



 Score = 70.5 bits (171), Expect = 9e-09
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
 Frame = +3

Query: 342 IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRT 521
           I+ EE   LR+ G+R++  L +G+ G+  G V  +H  W+  EL+KI  +D C  N++R 
Sbjct: 582 ISEEERYMLRKVGLRMQPFLLLGRRGVFAGTVENMHLHWKYRELIKIISKDRCIENVERA 641

Query: 522 HEILERKTGGLVV----WRSGSIIILYRGADYKYP 614
             ILE ++GG++V       G  II+YRG +YK P
Sbjct: 642 ARILEAESGGILVAVERVSKGHAIIVYRGKNYKRP 676


>ref|XP_010928535.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic [Elaeis
            guineensis]
          Length = 1019

 Score =  530 bits (1364), Expect(2) = 0.0
 Identities = 279/397 (70%), Positives = 296/397 (74%), Gaps = 2/397 (0%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRIS+KLRSLGYL               GSAGEIFIPTPQELPK RVGHTIDSSWSTPE
Sbjct: 65   IQRISEKLRSLGYLADDPTKSADRPPTGPGSAGEIFIPTPQELPKRRVGHTIDSSWSTPE 124

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            +PVPEPG+G  ++RF  LW                  VPMVAEL I  EELKRLR  GIR
Sbjct: 125  HPVPEPGSGATITRFHYLWSREKEQEKEKKASKEV--VPMVAELMIPAEELKRLRSEGIR 182

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            L+KRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCR+NMKRTHEILERKTGGLVVWR
Sbjct: 183  LQKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRMNMKRTHEILERKTGGLVVWR 242

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTAAINPLAK 746
            SGSIIILYRG +YKYPYF  GD++ +N D  S + SM D                     
Sbjct: 243  SGSIIILYRGTNYKYPYFHCGDEMKTNADGESLESSMED--------------------- 281

Query: 747  APNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVDADL 926
                        G      VRLQ  GE QLEEEA+RLLDGLGPRFTDWWGY+PLPVDADL
Sbjct: 282  ------------GALDKQGVRLQQPGEAQLEEEANRLLDGLGPRFTDWWGYDPLPVDADL 329

Query: 927  LPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSMIKL 1106
            LPAIIPGFRKPFRLLPFG+KPKLTDREMT LRRLSR LPCHFALGRNRN QGLAVSMIKL
Sbjct: 330  LPAIIPGFRKPFRLLPFGIKPKLTDREMTTLRRLSRHLPCHFALGRNRNHQGLAVSMIKL 389

Query: 1107 WEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            WEKCEV KIA+KRGVQNTNSE+M EELKQLTGG LLS
Sbjct: 390  WEKCEVVKIAIKRGVQNTNSELMAEELKQLTGGTLLS 426



 Score =  510 bits (1314), Expect(2) = 0.0
 Identities = 321/625 (51%), Positives = 392/625 (62%), Gaps = 20/625 (3%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSS-VHTTXXXXXXXXXXXXVDELTDATEETKSVTIKS 1434
            AVS AIEERRN  +   KQ +  S  V T             VDE     EE ++++ + 
Sbjct: 444  AVSLAIEERRNGGIGIQKQMTDGSGRVATIDAPEPEFVRAASVDESHGKAEEKRALSAER 503

Query: 1435 KLKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
            +LK +   ++RVE KL Q ++KKEKAE+LL  LE  V    VESD+E I+ EER+MLRKV
Sbjct: 504  RLKTS---LERVETKLFQVMEKKEKAEKLLKELEKPVEPLKVESDKEGISEEERHMLRKV 560

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKI SKD  IE+VE AAR LEAESGGIL
Sbjct: 561  GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKITSKDRCIENVECAARILEAESGGIL 620

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERV+KGHAIIVYRGKNYRRP +LRP+TLLSK+ AMK SLEAQR  SLKLHVL+LSRN
Sbjct: 621  VAVERVSKGHAIIVYRGKNYRRPSNLRPQTLLSKREAMKCSLEAQRSESLKLHVLNLSRN 680

Query: 1975 IDDLQHQM--VKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQ 2148
            ID L+HQM  VK  S  D ++L E  +       N+QS S                    
Sbjct: 681  IDQLKHQMSQVKAGSLEDSVQLTEHERISSAAETNDQSGS-------------------- 720

Query: 2149 LTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEE 2328
                        + DR       NG  + +  +E+ EEV+   +E +HS +HG   +  E
Sbjct: 721  -----------TLEDR-------NGFVDFTCQRESAEEVHEIHSESMHSEDHGH--NSRE 760

Query: 2329 ESTITSNNDNWV-------ALKQADERSKNEDVQLATE----------SANMADSDSRYI 2457
               I +   N V       +L+     SK+E     TE          + N  + +S   
Sbjct: 761  NGEIVNAPSNMVGSALPLNSLEHKLMISKHEHGNSETEVVRSLSDTRNNTNTPNDESGCT 820

Query: 2458 SDESEFLPEFCLQQEQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDL 2637
            SD   F P    Q+ Q S S T+ +   S +    L  AT +   D  +H D L+  S +
Sbjct: 821  SDGPAFHPGIFPQEAQASCSTTNNIFHDSSKGFDSLLVATRREP-DSMVHGDELEQESSV 879

Query: 2638 ENPFRAAPLSNRERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIK 2817
            E PF+A+PLSNRERLILRKQALKMRKRPVLAVGR+N+++GVAKTIKTHFKKHPLAIVNIK
Sbjct: 880  EMPFKASPLSNRERLILRKQALKMRKRPVLAVGRNNVISGVAKTIKTHFKKHPLAIVNIK 939

Query: 2818 GRAEGTSVQEVIFELEQATGAVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGAR 2997
             RA+GT VQE+IFELEQATGAVLVSREPNKVILYRGWGE ETPG     K+V    GG++
Sbjct: 940  HRAKGTPVQELIFELEQATGAVLVSREPNKVILYRGWGERETPG---GVKEVKPFKGGSK 996

Query: 2998 EEKKVCPELIEAIRVECGLSTSRME 3072
                V  +L+ AIR+ECGL ++ ++
Sbjct: 997  --CAVSSQLMAAIRLECGLQSNDLK 1019



 Score = 67.8 bits (164), Expect = 6e-08
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
 Frame = +3

Query: 342  IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRT 521
            I+ EE   LR+ G+R++  L +G+ G+  G V  +H  W+  ELVKI  +D C  N++  
Sbjct: 549  ISEEERHMLRKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKITSKDRCIENVECA 608

Query: 522  HEILERKTGGLVV----WRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTV 689
              ILE ++GG++V       G  II+YRG +Y+ P       + S  + M          
Sbjct: 609  ARILEAESGGILVAVERVSKGHAIIVYRGKNYRRPSNLRPQTLLSKREAMK--------C 660

Query: 690  STEQEKNTSSTAAINPLAKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEE 842
            S E +++ S    +  L++  + L +    +  GS       L   VQL E
Sbjct: 661  SLEAQRSESLKLHVLNLSRNIDQLKHQMSQVKAGS-------LEDSVQLTE 704



 Score = 60.5 bits (145), Expect = 1e-05
 Identities = 34/95 (35%), Positives = 52/95 (54%)
 Frame = +1

Query: 1579 ITVEERYMLRKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESA 1758
            I  EE   LR  G+R++  L +G+ G+  G V  +H  W+  ELVKI  +D    +++  
Sbjct: 168  IPAEELKRLRSEGIRLQKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRMNMKRT 227

Query: 1759 ARTLEAESGGILVAVERVNKGHAIIVYRGKNYRRP 1863
               LE ++GG++V       G  II+YRG NY+ P
Sbjct: 228  HEILERKTGGLVV----WRSGSIIILYRGTNYKYP 258


>ref|XP_009419882.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 999

 Score =  564 bits (1453), Expect(2) = 0.0
 Identities = 281/397 (70%), Positives = 320/397 (80%), Gaps = 2/397 (0%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRIS+KLRSLGYLE+             GSAGEIFIPT +E+P  RVG+TIDSSWSTPE
Sbjct: 67   IQRISEKLRSLGYLENGPATAADRPATGRGSAGEIFIPTSREIPSRRVGYTIDSSWSTPE 126

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            +PVPEPG+G  ++RF +LW                   PMVAELTI  EELKRLRR G+R
Sbjct: 127  HPVPEPGSGVTINRFGDLWRREKERQAAARATKDAAAPPMVAELTIPPEELKRLRREGVR 186

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            L KRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCR+NMKRTHEILERKTGGLV+WR
Sbjct: 187  LAKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRMNMKRTHEILERKTGGLVIWR 246

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTAAINPLAK 746
            SGSIIILYRG +YKYPY+ +GD+ N   D++S    + +  + +QE N+    + N  A+
Sbjct: 247  SGSIIILYRGVNYKYPYYYDGDKKNEIFDEVSLPSGLYNEETNKQEVNSPKMISANSSAE 306

Query: 747  APNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVDADL 926
            +P   + S LV+GVGSP KVR+QL GEVQLEEEADRLLDGLGPRFTDWWG +PLPVDADL
Sbjct: 307  SPTAPARSLLVVGVGSPKKVRVQLEGEVQLEEEADRLLDGLGPRFTDWWGCDPLPVDADL 366

Query: 927  LPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSMIKL 1106
            LPA++PGFRKP RL+PFG+KPKLTDREMTILRRL RPLPCHFALGR+RNLQGLAVSMIKL
Sbjct: 367  LPAVVPGFRKPLRLIPFGIKPKLTDREMTILRRLGRPLPCHFALGRSRNLQGLAVSMIKL 426

Query: 1107 WEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            WE+CE+AKIAVKRGVQNTNS +M EELKQLTGG LLS
Sbjct: 427  WERCEIAKIAVKRGVQNTNSIMMAEELKQLTGGTLLS 463



 Score =  465 bits (1197), Expect(2) = 0.0
 Identities = 284/607 (46%), Positives = 374/607 (61%), Gaps = 5/607 (0%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSS-VHTTXXXXXXXXXXXXVDELTDATEETKSVTIKS 1434
            AVS AIEERRN    + K++S ++  V +              DE  +  E+ ++  ++S
Sbjct: 481  AVSIAIEERRNYGSNKQKRNSDENHPVASINVSETKISKITLPDEPKEGAEQIRNFALES 540

Query: 1435 KLKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
            +    +   +R+E +LSQA++KKEKAE+ ++ LE  V  P  E D+EAI+ EERYMLRK+
Sbjct: 541  RKTSVNVAFQRMETRLSQAIKKKEKAEKFISELEPLVEPPKFEVDKEAISEEERYMLRKI 600

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMKPFLLLGRRGVF GTVENMHLHWKYRELVKIISKD  ++++E+AAR LEAESGGIL
Sbjct: 601  GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKDRCMKNIETAARILEAESGGIL 660

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERV+KG+AIIVYRGKNY+RP  LRP TLL+++ AM  SLEAQRC SLKLHVL++SRN
Sbjct: 661  VAVERVSKGYAIIVYRGKNYQRPVTLRPTTLLNRREAMIHSLEAQRCESLKLHVLNISRN 720

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            ++ ++HQMV++ S +D + + +                                    +T
Sbjct: 721  LNQMKHQMVQDDSLIDSVAVDKC-----------------------------------MT 745

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAE-SSFHQENTEEVNVATAEYLHSSNHGSVP---DD 2322
             SN     DE     +  + DN S +    H  ++E ++V  +  + +    SV    D+
Sbjct: 746  SSNVIATTDE---TGFGEMEDNNSVDCEGVHDTDSEPLHVGESSDITNDMKQSVSTAFDE 802

Query: 2323 EEESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQE 2502
             + S+ +S+ D  + LK  D  S  +  Q   E                        Q+ 
Sbjct: 803  MDYSSESSSKDKLIDLKHKDNHSDTKVAQFVLE------------------------QRA 838

Query: 2503 QVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERL 2682
             VS S                         D  + ED     + +E PF+AAPLSNRERL
Sbjct: 839  PVSSSVMG----------------------DSPVAEDTSVKEAYVEVPFKAAPLSNRERL 876

Query: 2683 ILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFEL 2862
            +LRKQALKM+KRPVLAVGR+NI++GVAKTI+THF K+PLAIVNIKGRA+GTSVQE+IFEL
Sbjct: 877  VLRKQALKMKKRPVLAVGRNNIISGVAKTIRTHFMKYPLAIVNIKGRAKGTSVQELIFEL 936

Query: 2863 EQATGAVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGAREEKKVCPELIEAIRV 3042
            EQATG+VLVSREPNKVILYRGWGEGE+PG    ++D  K SG    ++ V P+LIEAIR+
Sbjct: 937  EQATGSVLVSREPNKVILYRGWGEGESPG-GVRERD-AKPSG---VQEIVSPQLIEAIRL 991

Query: 3043 ECGLSTS 3063
            ECGL ++
Sbjct: 992  ECGLHST 998



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 85/365 (23%), Positives = 153/365 (41%), Gaps = 73/365 (20%)
 Frame = +3

Query: 342  IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRT 521
            I+ EE   LR+ G+R++  L +G+ G+ +G V  +H  W+  ELVKI  +D C  N++  
Sbjct: 589  ISEEERYMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKDRCMKNIETA 648

Query: 522  HEILERKTGGLVV----WRSGSIIILYRGADYKYP------------------------- 614
              ILE ++GG++V       G  II+YRG +Y+ P                         
Sbjct: 649  ARILEAESGGILVAVERVSKGYAIIVYRGKNYQRPVTLRPTTLLNRREAMIHSLEAQRCE 708

Query: 615  -----YFSNGDQINSNLDKMSEDPSMIDTVSTEQ---EKNTSSTAAINPLAKAPNNLSY- 767
                   +    +N    +M +D S+ID+V+ ++     N  +T       +  +N S  
Sbjct: 709  SLKLHVLNISRNLNQMKHQMVQDDSLIDSVAVDKCMTSSNVIATTDETGFGEMEDNNSVD 768

Query: 768  -------SSLVIGVGSPNKV-------------RLQLSGEVQLEEE-------------- 845
                    S  + VG  + +              +  S E   +++              
Sbjct: 769  CEGVHDTDSEPLHVGESSDITNDMKQSVSTAFDEMDYSSESSSKDKLIDLKHKDNHSDTK 828

Query: 846  -ADRLLDGLGPRFTDWWGYEPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILR 1022
             A  +L+   P  +   G  P+  D  +  A +     PF+  P   + +L  R+   L+
Sbjct: 829  VAQFVLEQRAPVSSSVMGDSPVAEDTSVKEAYV---EVPFKAAPLSNRERLVLRKQA-LK 884

Query: 1023 RLSRPLPCHFALGRNRNLQGLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTG 1202
               RP+    A+GRN  + G+A ++   + K  +A + +K   + T+ + ++ EL+Q TG
Sbjct: 885  MKKRPV---LAVGRNNIISGVAKTIRTHFMKYPLAIVNIKGRAKGTSVQELIFELEQATG 941

Query: 1203 GVLLS 1217
             VL+S
Sbjct: 942  SVLVS 946



 Score = 62.0 bits (149), Expect = 3e-06
 Identities = 39/124 (31%), Positives = 64/124 (51%)
 Frame = +1

Query: 1492 LQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRMKPFLLLGRRGVFAGT 1671
            L ++EK  +  A       AP + ++   I  EE   LR+ G+R+   L +G+ G+  G 
Sbjct: 144  LWRREKERQAAARATKDAAAPPMVAEL-TIPPEELKRLRREGVRLAKRLKVGKAGITEGI 202

Query: 1672 VENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVERVNKGHAIIVYRGKN 1851
            V  +H  W+  ELVKI  +D    +++     LE ++GG+++       G  II+YRG N
Sbjct: 203  VNGIHERWRRSELVKIKCEDLCRMNMKRTHEILERKTGGLVI----WRSGSIIILYRGVN 258

Query: 1852 YRRP 1863
            Y+ P
Sbjct: 259  YKYP 262


>ref|XP_008793805.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 1001

 Score =  568 bits (1465), Expect(2) = 0.0
 Identities = 291/397 (73%), Positives = 317/397 (79%), Gaps = 2/397 (0%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRIS+KLRSLGYL               GSAGEIFIPTP E+PK RVGHTIDSSWSTPE
Sbjct: 65   IQRISEKLRSLGYLADEPTKSADRPPTGPGSAGEIFIPTPHEIPKRRVGHTIDSSWSTPE 124

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            +PVPEPG+G  ++RF  LW                  VP VAELTI  E LKRLR  GIR
Sbjct: 125  HPVPEPGSGGTITRFNYLWSREKEQEKEKKASKEV--VPTVAELTIPAEVLKRLRSEGIR 182

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            L+KRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCR+NMKRTHEILERKTGGLVVWR
Sbjct: 183  LQKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRMNMKRTHEILERKTGGLVVWR 242

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTAAINPLAK 746
            SGSIIILYRGA+YKYPYF  GDQ+  N+D++S + SM D    +Q  N+     +   + 
Sbjct: 243  SGSIIILYRGANYKYPYFHYGDQMRKNVDEVSPESSMEDGALDKQGVNSMPACIVKSSSG 302

Query: 747  APNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVDADL 926
            +    + S LVIGVGSPNKVRLQ  GE QLEEEADRLLDGLGPRFT+WWGY+PLPVDADL
Sbjct: 303  SFATSAQSFLVIGVGSPNKVRLQQPGEAQLEEEADRLLDGLGPRFTNWWGYDPLPVDADL 362

Query: 927  LPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSMIKL 1106
            LPAI+PGFRKPFRLLPFG+KPKLTDREMTILRRLSR LPCHFALGRNRN QGLAVSMIKL
Sbjct: 363  LPAIVPGFRKPFRLLPFGIKPKLTDREMTILRRLSRHLPCHFALGRNRNHQGLAVSMIKL 422

Query: 1107 WEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            WEKCEVAKIA+KRGVQNTNSE+M EELKQLTGG LLS
Sbjct: 423  WEKCEVAKIAIKRGVQNTNSELMAEELKQLTGGTLLS 459



 Score =  400 bits (1027), Expect(2) = 0.0
 Identities = 278/608 (45%), Positives = 342/608 (56%), Gaps = 3/608 (0%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSS-VHTTXXXXXXXXXXXXVDELTDATEETKSVTIKS 1434
            AVS AIEERRN  +   +Q++     V T              DE     EE ++++ + 
Sbjct: 477  AVSLAIEERRNGGIGIKRQNTDGRGRVATIDAPELEFVRAASADEPHGKAEEKRALSTER 536

Query: 1435 KLKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
            + + A   ++RVE KL Q +++KEKAE+LL  LE  V    VESD+E I+ EERYMLRKV
Sbjct: 537  RPRTA---LERVETKLFQVMEEKEKAEKLLKELEKPVEPLKVESDKEGISEEERYMLRKV 593

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRM+PFLLLGRRGVFAGTVENMHLHWKYREL+KIISKD  IE+VE AAR LEAESGGIL
Sbjct: 594  GLRMQPFLLLGRRGVFAGTVENMHLHWKYRELIKIISKDRCIENVERAARILEAESGGIL 653

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERV+KGHAIIVYRGKNY+RP +LRP+TLLSK+ AMKRSLEAQR  SLKL VL+LSRN
Sbjct: 654  VAVERVSKGHAIIVYRGKNYKRPSNLRPQTLLSKREAMKRSLEAQRSKSLKLRVLNLSRN 713

Query: 1975 IDDLQHQM-VKE-HSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQ 2148
            ID L+HQM V E HS     +    N  E  + +NE S  +                 + 
Sbjct: 714  IDRLKHQMEVHEIHSESMHSKDHGHNSRENGEIVNEPSNVV------------GSAFPLN 761

Query: 2149 LTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEE 2328
              E      K E  +    +VR      +  +  N E    +     H    G  P + +
Sbjct: 762  SLEHKLMISKHEHENSETEVVRSLSDTRNDTNILNNESGCTSVGPAFHL---GICPQEAQ 818

Query: 2329 ESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQEQV 2508
             S  T+NN            SK  D  L    A   + DS    D         L+QE  
Sbjct: 819  ASCSTTNN-------IVHNPSKGLDSSLV---ATRREPDSMVHGD--------ILEQESA 860

Query: 2509 SMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERLIL 2688
                             E+ +  +     P  + +RL          R   L  R R +L
Sbjct: 861  ----------------VEIPFKAS-----PLSNRERL--------ILRKQALKMRNRPVL 891

Query: 2689 RKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFELEQ 2868
                         AVGR+N ++GVAKTIKTHFKKHPLAIVNIK RA+GT VQE+IFELEQ
Sbjct: 892  -------------AVGRNNAISGVAKTIKTHFKKHPLAIVNIKHRAKGTPVQELIFELEQ 938

Query: 2869 ATGAVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGAREEKKVCPELIEAIRVEC 3048
            ATGAVLVSREPNKVILYRGWGE ETPG     K+V    G ++    V  +L+ AIR+EC
Sbjct: 939  ATGAVLVSREPNKVILYRGWGERETPG---GVKEVKPSKGDSK--GTVPSQLMAAIRLEC 993

Query: 3049 GLSTSRME 3072
            GL T+ ++
Sbjct: 994  GLQTNDLK 1001



 Score = 70.5 bits (171), Expect = 9e-09
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
 Frame = +3

Query: 342 IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRT 521
           I+ EE   LR+ G+R++  L +G+ G+  G V  +H  W+  EL+KI  +D C  N++R 
Sbjct: 582 ISEEERYMLRKVGLRMQPFLLLGRRGVFAGTVENMHLHWKYRELIKIISKDRCIENVERA 641

Query: 522 HEILERKTGGLVV----WRSGSIIILYRGADYKYP 614
             ILE ++GG++V       G  II+YRG +YK P
Sbjct: 642 ARILEAESGGILVAVERVSKGHAIIVYRGKNYKRP 676


>ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 1034

 Score =  504 bits (1299), Expect(2) = 0.0
 Identities = 265/398 (66%), Positives = 302/398 (75%), Gaps = 3/398 (0%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRIS+KLRSLGYLE              GSAGEIFIP   ELPK+RVG+TIDSSWSTPE
Sbjct: 59   IQRISEKLRSLGYLEDNSRESQQPETNH-GSAGEIFIPFSHELPKYRVGYTIDSSWSTPE 117

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            NPVP PG+G  LSRF+EL                    P +AELTI  +ELKRL   GI 
Sbjct: 118  NPVPHPGSGAALSRFQEL---KRKVEKQKRSTKKEERAPTLAELTIPEQELKRLITIGIG 174

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            L+K+LKVGKAGITEGIVNGIHERWRRSELVKI+ EDLC +NMKRTH+ILERKTGGLVVWR
Sbjct: 175  LKKKLKVGKAGITEGIVNGIHERWRRSELVKIRFEDLCSMNMKRTHDILERKTGGLVVWR 234

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQ-EKNTSSTAAINPLA 743
            SGS IILYRGA+Y+YPYF       S+    +       T S  + +K ++ T   N +A
Sbjct: 235  SGSTIILYRGANYEYPYFKANKNTASDTSNTNSGGDGGSTNSLHKVDKESAQTGQSNGIA 294

Query: 744  KAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVDAD 923
              P       LV GVGSP+KVR QL GE++  EEAD LLDGLGPRFTDWWGY+PLPVDAD
Sbjct: 295  CPP-------LVHGVGSPDKVRFQLQGEIEFAEEADCLLDGLGPRFTDWWGYDPLPVDAD 347

Query: 924  LLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSMIK 1103
            LLPA++PG+RKPFRLLP+G++PKLT+ EMTILRRLSRPLPCHFALGRNR LQGLAVSM+K
Sbjct: 348  LLPAVVPGYRKPFRLLPYGIQPKLTNDEMTILRRLSRPLPCHFALGRNRKLQGLAVSMVK 407

Query: 1104 LWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            LWEKCE+AKIAVKRGVQNTNSE+M EELK+LTGG+LLS
Sbjct: 408  LWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGILLS 445



 Score =  444 bits (1142), Expect(2) = 0.0
 Identities = 285/610 (46%), Positives = 366/610 (60%), Gaps = 5/610 (0%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            +VSTAIEERR     R KQ   +SS+                    +   + K   I  K
Sbjct: 463  SVSTAIEERRKHGTGRSKQRVENSSLIDNMPETDIKTAGHPSANKFEGGYDQKRNLISDK 522

Query: 1438 LKPAS-SVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
             K +S S + R+  KLS AL+KK KAE+LLA LE +V     ESDRE IT EERYMLRKV
Sbjct: 523  TKESSKSAIYRITTKLSLALEKKTKAEKLLADLEKAVEPQKQESDREGITEEERYMLRKV 582

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMKPFLLLGRRGVF GTVENMHLHWKYRELVK+IS + SIE V+  ARTLEAESGGIL
Sbjct: 583  GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISSERSIEDVQRTARTLEAESGGIL 642

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERVNKG AIIVYRGKNY+RP DLRP+TLL+KKAAMKRSLEAQR  SLKLH+L L+R+
Sbjct: 643  VAVERVNKGCAIIVYRGKNYQRPVDLRPRTLLNKKAAMKRSLEAQRHKSLKLHILRLTRD 702

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            ID L+ Q+  E+    K   ++S   ++ D                             T
Sbjct: 703  IDQLKLQLGNENM---KTNCLQSTAQKIPD-----------------------------T 730

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 2334
            ES  SE+ D  +      V D    E++   E+      +      SS+    P+ ++  
Sbjct: 731  ESVTSEIYDSTDS-----VHDQEGVEAAERHESGSTSTCSNFCMHMSSDTAETPEQDKFV 785

Query: 2335 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQEQVSM 2514
               S  ++     +A+  S +E V   T+S N +D      +  S    E  +     + 
Sbjct: 786  DSISRYED--ETDKAELESSSEQVLEETDSNNFSDEVEERGTGVSISHSESSMWHGGTTY 843

Query: 2515 SATST-LSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERLILR 2691
            S      +  S++   E    +     +  +H+D  K  +++   FRA+PLSNR+RLILR
Sbjct: 844  SVNDNGTTGLSEDETRESPVESIGGKPELSVHKDVQKGNNEVS--FRASPLSNRDRLILR 901

Query: 2692 KQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFELEQA 2871
            KQALKM++RPVLAVG++NI+TGVAK I+ HF+KHPLAIVNIKGRA+GTSVQEV+F LEQA
Sbjct: 902  KQALKMKRRPVLAVGKNNIITGVAKAIQIHFQKHPLAIVNIKGRAKGTSVQEVVFMLEQA 961

Query: 2872 TGAVLVSREPNKVILYRGWGEGETP-GCDPNKKDVGK--GSGGAREEKKVCPELIEAIRV 3042
            TGAVLVS+EP+KVILYRGWG+ + P G + + ++  K     G      V P+L+ AIR+
Sbjct: 962  TGAVLVSQEPSKVILYRGWGKDDKPSGANKDTRNSLKTWPDKGENTLGSVPPQLMAAIRL 1021

Query: 3043 ECGLSTSRME 3072
            ECG  +S+ E
Sbjct: 1022 ECGFQSSQEE 1031



 Score = 62.0 bits (149), Expect = 3e-06
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
 Frame = +3

Query: 342 IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRT 521
           I  EE   LR+ G+R++  L +G+ G+ +G V  +H  W+  ELVK+   +    +++RT
Sbjct: 571 ITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISSERSIEDVQRT 630

Query: 522 HEILERKTGGLVV----WRSGSIIILYRGADYKYP 614
              LE ++GG++V       G  II+YRG +Y+ P
Sbjct: 631 ARTLEAESGGILVAVERVNKGCAIIVYRGKNYQRP 665


>ref|XP_012082331.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Jatropha curcas]
          Length = 1097

 Score =  485 bits (1248), Expect(2) = 0.0
 Identities = 253/404 (62%), Positives = 295/404 (73%), Gaps = 9/404 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLE---SXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWS 203
            I+RI+DKLRSLG+ E                    GEIFIP P +LPK+RVGHT+D SWS
Sbjct: 60   IKRIADKLRSLGFTEHNPKLPETLNSELERETKQVGEIFIPLPNQLPKYRVGHTLDPSWS 119

Query: 204  TPENPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRS 377
            TPENPVP PGAG  ++R+ EL                   VP +A L++  EEL+RLR  
Sbjct: 120  TPENPVPIPGAGKAIARYHEL---RKEVKKEREAKKREPKVPTLAVLSLPAEELRRLRTI 176

Query: 378  GIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLV 557
            GI  +++LKVGKAGITEGIVNGIHERWRR+E+VKI CEDLCR+NMKRTH++LERKTGGLV
Sbjct: 177  GIAEKRKLKVGKAGITEGIVNGIHERWRRAEVVKIVCEDLCRMNMKRTHDMLERKTGGLV 236

Query: 558  VWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTAAINP 737
            VWRSGS I+LYRG +YKYPYFS     N   ++ S D    + V  E +K  S ++  N 
Sbjct: 237  VWRSGSKIVLYRGVNYKYPYFSPN---NITANETSSDAVHDNHVDCEDDKMGSCSSRANS 293

Query: 738  LAKA----PNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEP 905
            L  +     N +   +LV GVGSP++VR +L GE QL EE D LLDGLGPRFTDWWGYEP
Sbjct: 294  LRSSGSSETNKMVRPTLVQGVGSPDRVRFELPGEAQLAEEIDSLLDGLGPRFTDWWGYEP 353

Query: 906  LPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGL 1085
            LPVDADLLPAI+PG+RKPFRLLP+GV PKLTD EMT LRRL RPLPCHFALGRNR LQGL
Sbjct: 354  LPVDADLLPAIVPGYRKPFRLLPYGVMPKLTDDEMTALRRLGRPLPCHFALGRNRKLQGL 413

Query: 1086 AVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            A S++KLWEKCE+AKIAVKRGVQNTNSE+M EELK LTGG LLS
Sbjct: 414  AASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKWLTGGTLLS 457



 Score =  433 bits (1114), Expect(2) = 0.0
 Identities = 278/628 (44%), Positives = 366/628 (58%), Gaps = 23/628 (3%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXV----DELTDATEETKSVT 1425
            AVS+ I+ERR   +   KQ  H S    T                 DE     E++  + 
Sbjct: 475  AVSSVIKERRKYLIHGDKQRRHQSIAGETLKEAEDIKIETISSGSNDEFNSDNEQSSDLL 534

Query: 1426 IKSKLKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYML 1605
               KL+   + +KR   +LS AL+ K KAE+LLA LE          D+E IT EERYML
Sbjct: 535  KDKKLRSLEAAIKRTSIRLSMALENKAKAEKLLAELENLEMPQQPAIDKEGITEEERYML 594

Query: 1606 RKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESG 1785
            RK+GL+MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII K+ S+E     ARTLE ESG
Sbjct: 595  RKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKERSLEAAYEVARTLEVESG 654

Query: 1786 GILVAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSL 1965
            GILVAVERV+KG+AI+VYRGKNYRRP  LRP TLLSK+ A+KRSLEAQR  SLKLHVL L
Sbjct: 655  GILVAVERVSKGYAIVVYRGKNYRRPARLRPPTLLSKREALKRSLEAQRRESLKLHVLKL 714

Query: 1966 SRNIDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSM 2145
            +RN++DL+ ++ K+     K    E+   +  DS +  + + +               S+
Sbjct: 715  TRNVNDLKLKLAKDEEAHSKHSFDETRDDDEADSNSNSNSNDDGKNIRPAQWADQTDPSL 774

Query: 2146 --QLTESNKSEVKDEM-------NDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSS 2298
               +    KSE K  M       ++  ++ + D     +SF       VN  T +  H  
Sbjct: 775  LFSVNAMGKSESKSSMESVGLEAHESLFATMNDGAVDSTSF------PVNFETKDN-HKG 827

Query: 2299 NHGSVPDDEEESTITSNNDNWV---ALKQADERSKNEDVQLATESANMADSDSRYISD-- 2463
            +  S+ +D+ +    +   N      L   +   K+E  Q + ES ++   DS +I+D  
Sbjct: 828  DSNSIANDDGDGIQPAEQANQTDPSLLFDVNGIGKSEP-QSSVESVSIEACDSLFINDGA 886

Query: 2464 --ESEFLPEFCLQQEQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDL 2637
               + F   F   Q +   SA    ++       E+  +  +ST +    E+ +    + 
Sbjct: 887  VKSTSFPVNFTGYQLEKRRSAPLANAEHCMPGN-EMIRSKVESTSEV---EESVSISVEK 942

Query: 2638 ENPFRAAPLSNRERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIK 2817
            E P +   LSNR+RL+LRKQALKM+ RPVLAVGRSNIVTGVAKTIK HF+K+PLAIVN+K
Sbjct: 943  ETPPKVIHLSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFQKYPLAIVNVK 1002

Query: 2818 GRAEGTSVQEVIFELEQATGAVLVSREPNKVILYRGWGEGETPG--CDPNKKDVGKGS-G 2988
            GRA+GTSVQEVIF+LEQATG VLVS+EP+KVILYRGWG  + P      N ++ G  S G
Sbjct: 1003 GRAKGTSVQEVIFQLEQATGGVLVSQEPSKVILYRGWGAFDEPNHKFKYNAQNTGSPSVG 1062

Query: 2989 GAREEKKVCPELIEAIRVECGLSTSRME 3072
            G R    V PEL+ AIR+ECGLS ++ +
Sbjct: 1063 GGRSHHAVSPELMAAIRLECGLSETKSD 1090



 Score = 60.5 bits (145), Expect = 1e-05
 Identities = 40/124 (32%), Positives = 63/124 (50%)
 Frame = +1

Query: 1492 LQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRMKPFLLLGRRGVFAGT 1671
            L+K+ K ER     E  V    V S    +  EE   LR +G+  K  L +G+ G+  G 
Sbjct: 140  LRKEVKKEREAKKREPKVPTLAVLS----LPAEELRRLRTIGIAEKRKLKVGKAGITEGI 195

Query: 1672 VENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVERVNKGHAIIVYRGKN 1851
            V  +H  W+  E+VKI+ +D    +++     LE ++GG++V       G  I++YRG N
Sbjct: 196  VNGIHERWRRAEVVKIVCEDLCRMNMKRTHDMLERKTGGLVV----WRSGSKIVLYRGVN 251

Query: 1852 YRRP 1863
            Y+ P
Sbjct: 252  YKYP 255


>ref|XP_011625144.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Amborella trichopoda]
          Length = 1062

 Score =  482 bits (1241), Expect(2) = 0.0
 Identities = 253/400 (63%), Positives = 297/400 (74%), Gaps = 5/400 (1%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI++KL+SLGY+E              GS GEIFIP  + L K RVG T+D SWSTPE
Sbjct: 64   IQRIAEKLKSLGYVEELNDSEPQCTGP--GSPGEIFIPRLENLAKIRVGSTLDKSWSTPE 121

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            NPVPEPG+G  +SRF  L                    P +AEL I   EL+RLR  GI 
Sbjct: 122  NPVPEPGSGSAISRFHVL----RKEAKKNAVKGERGSAPSLAELRIPEAELQRLRSIGIC 177

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            LEK+L VGK G+TEGIVNGIHERWRRSELVKIKC+DL  +NMKRTHEILE KTGG+V+ R
Sbjct: 178  LEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVICR 237

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLD--KMSEDPSMIDTVSTEQEKNTSSTAAINPL 740
            SGSIIILYRGA+Y YPYF  G+ ++ N D  ++S   S++    + +E  T+S   +  +
Sbjct: 238  SGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGSNEENKTNSLPRVGGI 297

Query: 741  -AKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVD 917
             A     ++  S+V+GVGSPNKVR QL GE QL++EADRLLDGLGPRFTDWWGY PLPVD
Sbjct: 298  SAVEATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGYGPLPVD 357

Query: 918  ADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSM 1097
            ADLLPA + G+RKPFRLLP+GVKPKLTD EMT LRRL RPLPCHFALGRNRNLQGLA S+
Sbjct: 358  ADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQGLATSI 417

Query: 1098 IKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            ++LWEKCE+AKIAVKRGVQNTNSE+M EELK+LTGG LLS
Sbjct: 418  VRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLS 457



 Score =  428 bits (1101), Expect(2) = 0.0
 Identities = 273/616 (44%), Positives = 360/616 (58%), Gaps = 17/616 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSH---DSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTI 1428
            AVS+AIEERR  +V R +   +   D S   +              EL D   + +    
Sbjct: 475  AVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEEKLS 534

Query: 1429 KSKLKP--ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYM 1602
            K +LKP   +  MKR++ KLS+AL+KK+ AER LA LE        + D+E IT EERYM
Sbjct: 535  KDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEERYM 594

Query: 1603 LRKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAES 1782
            LRKVGLRMK FLLLGRRGVF GT+ENMHLHWKYREL+KIISKD SI  V  AARTLEAES
Sbjct: 595  LRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLEAES 654

Query: 1783 GGILVAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLS 1962
            GGILV+VE VNKGHAIIVYRGKNY+RP +LRP+ LL+K+ AMK SLEAQR  SLKLHVL 
Sbjct: 655  GGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQRRESLKLHVLK 714

Query: 1963 LSRNIDDLQHQMVKEHSTV---DKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXX 2133
            L R ID ++ QM K+   V      R + S+  E+ ++ +                    
Sbjct: 715  LDRIIDRMKLQMAKDDRVVASPHSTRYLGSSNCELGNTEH----------TLGSLDYSNH 764

Query: 2134 XXSMQLTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSV 2313
               M+  ++++  +    +D    +   NG   S+ + ++ ++V V            S 
Sbjct: 765  FKDMENGDASQGPLHSSSSDDEDVVTPSNGVRWSTSYADDAQQVVV--KRRFPRDFEKSP 822

Query: 2314 PDDEEESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCL 2493
             D     T+ S + + V+  +A+ER + E     TE   + +  +   ++    LP    
Sbjct: 823  KDVSSSKTVVSRSCSCVSQDEAEERLELEP-DFHTEDIMLHNKPALATTEGEPLLPPMI- 880

Query: 2494 QQEQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNR 2673
              E   +S+           +A L   ++   +D  +          +E  F+A  LSN+
Sbjct: 881  --EPTGLSS-----------KAPLGNTSSSKPLDKRVSS------IGVETSFKAQSLSNK 921

Query: 2674 ERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVI 2853
            ERLILRKQAL M+KRPVLA+GR+NIVTGVA+ IKTHFKK+PLAIVN+KGRA+GTSVQEV+
Sbjct: 922  ERLILRKQALTMKKRPVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEVV 981

Query: 2854 FELEQATGAVLVSREPNKVILYRGWGEGETPGCDPNK---------KDVGKGSGGAREEK 3006
            F+LEQATGAVLVS+EPNKVILYRGWG G+      +K         K +G+   G    K
Sbjct: 982  FKLEQATGAVLVSQEPNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNGFVGVK 1041

Query: 3007 KVCPELIEAIRVECGL 3054
               P+L+ A+R+ECGL
Sbjct: 1042 DASPQLLAAMRLECGL 1057



 Score = 63.5 bits (153), Expect = 1e-06
 Identities = 42/139 (30%), Positives = 66/139 (47%)
 Frame = +1

Query: 1447 ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRM 1626
            + S + R      +A +   K ER  A     +  P  E  R          LR +G+ +
Sbjct: 129  SGSAISRFHVLRKEAKKNAVKGERGSAPSLAELRIPEAELQR----------LRSIGICL 178

Query: 1627 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVE 1806
            +  L++G+ GV  G V  +H  W+  ELVKI  +D S+ +++     LE ++GGI++   
Sbjct: 179  EKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVIC-- 236

Query: 1807 RVNKGHAIIVYRGKNYRRP 1863
                G  II+YRG NY  P
Sbjct: 237  --RSGSIIILYRGANYTYP 253


>ref|XP_011625143.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Amborella trichopoda]
          Length = 1070

 Score =  482 bits (1241), Expect(2) = 0.0
 Identities = 253/400 (63%), Positives = 297/400 (74%), Gaps = 5/400 (1%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI++KL+SLGY+E              GS GEIFIP  + L K RVG T+D SWSTPE
Sbjct: 64   IQRIAEKLKSLGYVEELNDSEPQCTGP--GSPGEIFIPRLENLAKIRVGSTLDKSWSTPE 121

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            NPVPEPG+G  +SRF  L                    P +AEL I   EL+RLR  GI 
Sbjct: 122  NPVPEPGSGSAISRFHVL----RKEAKKNAVKGERGSAPSLAELRIPEAELQRLRSIGIC 177

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            LEK+L VGK G+TEGIVNGIHERWRRSELVKIKC+DL  +NMKRTHEILE KTGG+V+ R
Sbjct: 178  LEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVICR 237

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLD--KMSEDPSMIDTVSTEQEKNTSSTAAINPL 740
            SGSIIILYRGA+Y YPYF  G+ ++ N D  ++S   S++    + +E  T+S   +  +
Sbjct: 238  SGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGSNEENKTNSLPRVGGI 297

Query: 741  -AKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVD 917
             A     ++  S+V+GVGSPNKVR QL GE QL++EADRLLDGLGPRFTDWWGY PLPVD
Sbjct: 298  SAVEATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGYGPLPVD 357

Query: 918  ADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSM 1097
            ADLLPA + G+RKPFRLLP+GVKPKLTD EMT LRRL RPLPCHFALGRNRNLQGLA S+
Sbjct: 358  ADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQGLATSI 417

Query: 1098 IKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            ++LWEKCE+AKIAVKRGVQNTNSE+M EELK+LTGG LLS
Sbjct: 418  VRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLS 457



 Score =  427 bits (1097), Expect(2) = 0.0
 Identities = 274/617 (44%), Positives = 354/617 (57%), Gaps = 18/617 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSH---DSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTI 1428
            AVS+AIEERR  +V R +   +   D S   +              EL D   + +    
Sbjct: 475  AVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEEKLS 534

Query: 1429 KSKLKP--ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYM 1602
            K +LKP   +  MKR++ KLS+AL+KK+ AER LA LE        + D+E IT EERYM
Sbjct: 535  KDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEERYM 594

Query: 1603 LRKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAES 1782
            LRKVGLRMK FLLLGRRGVF GT+ENMHLHWKYREL+KIISKD SI  V  AARTLEAES
Sbjct: 595  LRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLEAES 654

Query: 1783 GGILVAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLS 1962
            GGILV+VE VNKGHAIIVYRGKNY+RP +LRP+ LL+K+ AMK SLEAQR  SLKLHVL 
Sbjct: 655  GGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQRRESLKLHVLK 714

Query: 1963 LSRNIDDLQHQMVKEHSTV---DKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXX 2133
            L R ID ++ QM K+   V      R + S+  E+ ++ +                    
Sbjct: 715  LDRIIDRMKLQMAKDDRVVASPHSTRYLGSSNCELGNTEHTLGSLDYSNHFKDMENGDAS 774

Query: 2134 XXSMQLTESNKSEVKDEMNDRSWSI-VRDNGSAESSFHQENTEEVNVATAEYLHSSNHGS 2310
               +  + S+  +V    N   WS    D+    +  H +      V            S
Sbjct: 775  QGPLHSSSSDDEDVVTPSNGVRWSTSYADDAQVLTPSHGK-----QVVVKRRFPRDFEKS 829

Query: 2311 VPDDEEESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFC 2490
              D     T+ S + + V+  +A+ER + E     TE   + +  +   ++    LP   
Sbjct: 830  PKDVSSSKTVVSRSCSCVSQDEAEERLELEP-DFHTEDIMLHNKPALATTEGEPLLPPMI 888

Query: 2491 LQQEQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSN 2670
               E   +S+           +A L   ++   +D  +          +E  F+A  LSN
Sbjct: 889  ---EPTGLSS-----------KAPLGNTSSSKPLDKRVSS------IGVETSFKAQSLSN 928

Query: 2671 RERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEV 2850
            +ERLILRKQAL M+KRPVLA+GR+NIVTGVA+ IKTHFKK+PLAIVN+KGRA+GTSVQEV
Sbjct: 929  KERLILRKQALTMKKRPVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEV 988

Query: 2851 IFELEQATGAVLVSREPNKVILYRGWGEGETPGCDPNK---------KDVGKGSGGAREE 3003
            +F+LEQATGAVLVS+EPNKVILYRGWG G+      +K         K +G+   G    
Sbjct: 989  VFKLEQATGAVLVSQEPNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNGFVGV 1048

Query: 3004 KKVCPELIEAIRVECGL 3054
            K   P+L+ A+R+ECGL
Sbjct: 1049 KDASPQLLAAMRLECGL 1065



 Score = 63.5 bits (153), Expect = 1e-06
 Identities = 42/139 (30%), Positives = 66/139 (47%)
 Frame = +1

Query: 1447 ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRM 1626
            + S + R      +A +   K ER  A     +  P  E  R          LR +G+ +
Sbjct: 129  SGSAISRFHVLRKEAKKNAVKGERGSAPSLAELRIPEAELQR----------LRSIGICL 178

Query: 1627 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVE 1806
            +  L++G+ GV  G V  +H  W+  ELVKI  +D S+ +++     LE ++GGI++   
Sbjct: 179  EKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVIC-- 236

Query: 1807 RVNKGHAIIVYRGKNYRRP 1863
                G  II+YRG NY  P
Sbjct: 237  --RSGSIIILYRGANYTYP 253


>ref|XP_009762860.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana sylvestris]
          Length = 1051

 Score =  486 bits (1251), Expect(2) = 0.0
 Identities = 249/407 (61%), Positives = 297/407 (72%), Gaps = 12/407 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYL-------ESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTID 191
            IQRI++KLRSLGY+       E+              S G+IF+P P +LPK+RVGHT+D
Sbjct: 62   IQRIANKLRSLGYITENPKNQETTLEENSLSPNPNSSSPGQIFVPLPNQLPKYRVGHTLD 121

Query: 192  SSWSTPENPVPEPGAG--LSRFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREE 356
             SWSTPENPVP+PG G  + +F EL   +                   P +AELT+  EE
Sbjct: 122  VSWSTPENPVPQPGLGNSIQKFHELRGNFLKEKEKERLKNKDSKKERAPSLAELTLPDEE 181

Query: 357  LKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILE 536
            L+RLR  GI L K+LK+GKAGITEGIVNGIHERWRR ELVKI CEDLCRLNMKRTHE+LE
Sbjct: 182  LRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDLCRLNMKRTHELLE 241

Query: 537  RKTGGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTS 716
            RKTGGLV+WRSGS IILYRGADYKYPYFS          +    P +  T + E   N+S
Sbjct: 242  RKTGGLVIWRSGSNIILYRGADYKYPYFSESSS------RQDASPDLF-TGTEEHTTNSS 294

Query: 717  STAAINPLAKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWG 896
               AI   + A +  S + ++ GVGSP++VR QL GE +L EEAD+LL+GLGPRFTDWWG
Sbjct: 295  DMDAIK--SDASDRKSPTRVIQGVGSPDRVRFQLPGEAELTEEADKLLEGLGPRFTDWWG 352

Query: 897  YEPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNL 1076
             EPLP+DADLLPA++PG++KPFRLLP+GVKPKLT+ EMT L+RL RPLPCHFALGRNR L
Sbjct: 353  CEPLPIDADLLPAVVPGYKKPFRLLPYGVKPKLTNDEMTTLKRLGRPLPCHFALGRNRKL 412

Query: 1077 QGLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            QGLA +++KLWEKCE+AK+AVKRGVQNTNSE+M EELK LTGG LLS
Sbjct: 413  QGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLS 459



 Score =  420 bits (1079), Expect(2) = 0.0
 Identities = 273/607 (44%), Positives = 353/607 (58%), Gaps = 8/607 (1%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            AVS+AI ERR   V   K+SS  SSV  T             DE  +  ++ K V  K K
Sbjct: 477  AVSSAIAERRKQVVEEEKKSSFSSSVANTKEQKKSTVRSVSDDEHANQNDQ-KGVQEKKK 535

Query: 1438 LKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVG 1617
            L    + +KR   KL+ A++KK KAE+LL  LE        + D+E IT EER+MLRK+G
Sbjct: 536  LTSMEAAIKRTADKLATAIEKKAKAEQLLVELEEDEMPQQPDLDKEGITEEERFMLRKIG 595

Query: 1618 LRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILV 1797
            LRMKPFLLLGRRGVF GTVENMHLHWKYRELVK+I+   SIE V   AR LEAESGGILV
Sbjct: 596  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVIAGRKSIEEVNQIARMLEAESGGILV 655

Query: 1798 AVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRNI 1977
            AVERVNKG+AIIVYRGKNY RP  LRP+TLLSK+ AMKRS+EAQR  SLKLHVL L++NI
Sbjct: 656  AVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNI 715

Query: 1978 DDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLTE 2157
            + L+ ++ K                  E+ ++ QS  +                 +Q+TE
Sbjct: 716  EALKSRLTKS-----------------EEMIHMQSPDM---------------VGLQVTE 743

Query: 2158 SNKSEVKDEMNDRSW----SIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDE 2325
            +  S      N  S         D G         + +E+   ++E  HSS    +P D 
Sbjct: 744  TGTSNAARGTNYHSSLASPCTSEDCGDVAKDADHSSQKELLSDSSETDHSSQQ-ELPSDS 802

Query: 2326 E---ESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQ 2496
                ES   +  D     +Q+   +K           N+   +  + S  SE + +    
Sbjct: 803  SFKYESNAEAMTDTIQPQRQSISSTKESKSMF-----NVNVDEEAFGSAVSESVSKSSRG 857

Query: 2497 QEQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRE 2676
            ++++  S T ++++   EV+     +   S       E R         P +   LSNRE
Sbjct: 858  EDKIHFSETRSVNKLR-EVDNRKEVSEVDSVKAQQ--ELRSTRSRSEGMPPKKVHLSNRE 914

Query: 2677 RLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIF 2856
            RL+LRKQALKM+++PVLAVGRSNIVTGVAK IK HFKK+PLAIVN+KGRA+GTSV+EV+F
Sbjct: 915  RLLLRKQALKMKQQPVLAVGRSNIVTGVAKAIKAHFKKYPLAIVNVKGRAKGTSVREVVF 974

Query: 2857 ELEQATGAVLVSREPNKVILYRGWG-EGETPGCDPNKKDVGKGSGGAREEKKVCPELIEA 3033
            +LEQATGAVLVS+EP+KVILYRGWG EG+    + N     + S   +++  + PELI A
Sbjct: 975  KLEQATGAVLVSQEPSKVILYRGWGPEGQRGASNRNGIRDSRNSREHKDQLAISPELISA 1034

Query: 3034 IRVECGL 3054
            IR+ECGL
Sbjct: 1035 IRLECGL 1041


>ref|XP_009614930.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 1051

 Score =  484 bits (1247), Expect(2) = 0.0
 Identities = 250/407 (61%), Positives = 297/407 (72%), Gaps = 12/407 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYL-------ESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTID 191
            IQRI++KLRSLGY+       E+              S G+IF+P P +LPK+RVGHT+D
Sbjct: 62   IQRIANKLRSLGYITENPKNQETTLEENSLSPNPNSSSPGQIFVPLPNQLPKYRVGHTLD 121

Query: 192  SSWSTPENPVPEPGAG--LSRFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREE 356
             SWSTPENPVP PG G  + +F EL   +                   P +AELT+  EE
Sbjct: 122  VSWSTPENPVPHPGLGNSIQKFHELRSNFLKEKEKERLKNKDNKKERAPSLAELTLPAEE 181

Query: 357  LKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILE 536
            L+RLR  GI L K+LK+GKAGITEGIVNGIHERWRR ELVKI CEDLCRLNMKRTHE+LE
Sbjct: 182  LRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDLCRLNMKRTHELLE 241

Query: 537  RKTGGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTS 716
            RKTGGLV+WRSGS IILYRGADYKYPYFS     NS  D   +    + T + E   N+S
Sbjct: 242  RKTGGLVIWRSGSNIILYRGADYKYPYFSES---NSGQDASPD----LFTGTEEHMTNSS 294

Query: 717  STAAINPLAKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWG 896
               AI   + A +  S + ++ GVGSP++VR QL GE +L EEAD+LL+GLGPRFTDWWG
Sbjct: 295  DMDAIK--SDASDRKSPTRVIQGVGSPDRVRFQLPGEAELTEEADKLLEGLGPRFTDWWG 352

Query: 897  YEPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNL 1076
             EPLP+DAD LPA++PG++KPFRLLP+GVKPKLT+ EMT L+RL RPLPCHFALGRNR L
Sbjct: 353  CEPLPIDADFLPAVVPGYKKPFRLLPYGVKPKLTNDEMTTLKRLGRPLPCHFALGRNRKL 412

Query: 1077 QGLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            QGLA +++KLWEKCE+AK+AVKRGVQNTNSE+M EELK LTGG LLS
Sbjct: 413  QGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLS 459



 Score =  418 bits (1075), Expect(2) = 0.0
 Identities = 272/606 (44%), Positives = 350/606 (57%), Gaps = 7/606 (1%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            AVS+AI ERR   V   K+SS  SSV  T             DE  +  ++ K V  K K
Sbjct: 477  AVSSAIAERRKQVVEEEKKSSFSSSVANTKERKKSTARSVSDDEHANQNDQ-KGVHEKKK 535

Query: 1438 LKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVG 1617
            L    + +KR   KL+ A++KK KAE+LL  LE        + D+E IT EER+MLRK+G
Sbjct: 536  LTSMEAAIKRTADKLATAIEKKAKAEKLLVELEEDEMPQQPDMDKEGITEEERFMLRKIG 595

Query: 1618 LRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILV 1797
            LRMKPFLLLGRRGVF GTVENMHLHWKYRELVK+I+    IE V   AR LEAESGGILV
Sbjct: 596  LRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKGIEEVNQIARMLEAESGGILV 655

Query: 1798 AVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRNI 1977
            AVERVNKG+AIIVYRGKNY RP  LRP+TLLSK+ AMKRS+EAQR  SLKLHVL L++NI
Sbjct: 656  AVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLAQNI 715

Query: 1978 DDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLTE 2157
            + L+ ++ K                  E+ ++ QS  I                 +Q+ E
Sbjct: 716  EALKSRLTKS-----------------EEMIHIQSPDI---------------VGLQVAE 743

Query: 2158 SNKSEVKDEMNDRSW----SIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDD- 2322
            +  S      N +S         D G A       + +E+   ++E  HSS      D  
Sbjct: 744  TGTSNAAGGTNYQSSLASPCTSEDFGGAAKDTDHSSQKELPSDSSETDHSSQQEFPSDSS 803

Query: 2323 -EEESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQ 2499
             + ES   + +D      Q+   +K           N+   +  + S  SE + +    +
Sbjct: 804  FQYESKAEAMSDTIQPQHQSISSTKESKSMF-----NVNVDEKAFGSAVSESVSKSSRGE 858

Query: 2500 EQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRER 2679
             ++  S T ++++   EV+     +   S       E R         P +   LSNRER
Sbjct: 859  VKIHFSETRSVNKLR-EVDNRKEVSEVDSVKPQQ--ELRSTRSRSEGMPPKKVHLSNRER 915

Query: 2680 LILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFE 2859
            L+LRKQALKM+++PVLAVGRSNIVTGVAK IK HFKK+PLAIVN+KGRA+GTSV+EV+F+
Sbjct: 916  LLLRKQALKMKQQPVLAVGRSNIVTGVAKAIKAHFKKYPLAIVNVKGRAKGTSVREVVFK 975

Query: 2860 LEQATGAVLVSREPNKVILYRGWG-EGETPGCDPNKKDVGKGSGGAREEKKVCPELIEAI 3036
            LEQATGAVLVS EP+KVILYRGWG EG+    + N     + S   +++  + PELI AI
Sbjct: 976  LEQATGAVLVSEEPSKVILYRGWGPEGQRGASNRNGTGYSRNSREHKDQLVISPELISAI 1035

Query: 3037 RVECGL 3054
            R+ECGL
Sbjct: 1036 RLECGL 1041


>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Cicer arietinum]
          Length = 1019

 Score =  468 bits (1204), Expect(2) = 0.0
 Identities = 240/403 (59%), Positives = 288/403 (71%), Gaps = 8/403 (1%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI+DKL+SLG                   AGEIF+P P  LPK+RVGHT+D SWSTPE
Sbjct: 52   IQRIADKLQSLGITTEQSTTTKNTISTTI--AGEIFVPLPHNLPKYRVGHTLDPSWSTPE 109

Query: 213  NPVPEPGAGLSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIRLE 392
            NPVP PGAG+ +  E                    VP +AEL++   E+ RL + G  ++
Sbjct: 110  NPVPFPGAGIEKLSENEVERQRLERAKAREEKKRRVPTLAELSLTDGEIMRLTKLGFEMK 169

Query: 393  KRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWRSG 572
            +++KVGKAGITEGIVNGIHERWRRSE+V+I CEDLCR+NMKRTH+ILERKTGGLVVWRSG
Sbjct: 170  QKIKVGKAGITEGIVNGIHERWRRSEVVRIVCEDLCRINMKRTHDILERKTGGLVVWRSG 229

Query: 573  SIIILYRGADYKYPYFSNG-----DQINSNLDKMSEDPSMID---TVSTEQEKNTSSTAA 728
            S IILYRG DYKYPYF +      D+I+  L  M  D    D   + S+E    T ++ +
Sbjct: 230  SKIILYRGIDYKYPYFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNSTTHASHS 289

Query: 729  INPLAKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPL 908
             N     P      +LV GVG+PNKVR QL GE +L EE D LL+GLGPRFTDWWGY+P+
Sbjct: 290  SNIRTVKP------ALVQGVGTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPV 343

Query: 909  PVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLA 1088
            PVDADLLPA+IPGFR+PFRLLP+GVK  LTD E+T L+RL RPLPCHFALGRNR LQGLA
Sbjct: 344  PVDADLLPAVIPGFRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLA 403

Query: 1089 VSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
             ++IKLWE+CE+AKIAVKRGVQNT+++IM EE+K LTGG LLS
Sbjct: 404  AAIIKLWERCEIAKIAVKRGVQNTSNKIMAEEIKHLTGGTLLS 446



 Score =  427 bits (1098), Expect(2) = 0.0
 Identities = 263/599 (43%), Positives = 359/599 (59%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            A S+AI++RRN  + ++K + + SSV  +              E+ +    TK       
Sbjct: 464  AASSAIQQRRNVLINKVK-AENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTK------- 515

Query: 1438 LKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVG 1617
               A + +KR   KLSQAL+KK KAE+LLA LE        E D+E IT EERYMLR++G
Sbjct: 516  ---AKAAIKRTSIKLSQALEKKAKAEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIG 572

Query: 1618 LRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILV 1797
            L+MKPFLLLGRRGVF GTVENMHLHWKYRELVKII    S+E V   A TLEAESGGILV
Sbjct: 573  LKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQTALTLEAESGGILV 632

Query: 1798 AVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRNI 1977
            AVERV+KGHAIIVYRGKNY RP  LRP+TLL+KK A+KRS+EAQR  +LKLHVL L +NI
Sbjct: 633  AVERVSKGHAIIVYRGKNYSRPSCLRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNI 692

Query: 1978 DDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLTE 2157
            ++L+ QMVK+ ++    ++ E+ +S++    +  S +                 S+    
Sbjct: 693  NELKLQMVKDEAS--SKQIAETLRSDLAIDKHGGSSN-----------------SINCNS 733

Query: 2158 SNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEEST 2337
              ++ V ++       I   +G + +S +  +++E +V   +      H  + D    + 
Sbjct: 734  PKEASVHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQHIELIDGASSNL 793

Query: 2338 ITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQEQVSMS 2517
            I+S  +  V  ++A +    E +          +S +  +  E         Q ++ S S
Sbjct: 794  ISSPEEASVGNQRAIQEQYIELIDTGGARQGEPESSAGLVHQER--------QLDEESDS 845

Query: 2518 ATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERLILRKQ 2697
               T    S+    E S A+ +S  +P      + + S +E P R+  LSNRERL+LR+Q
Sbjct: 846  VVDTGHCVSNNKAMEASVASLKSDPEP---SAPVINKSSIELPSRSLYLSNRERLLLRRQ 902

Query: 2698 ALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFELEQATG 2877
            AL M+KRP+LA+G+SN VTG+AK IK HF+KHP  IVN+KGRA+GTSV E++ +LE ATG
Sbjct: 903  ALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATG 962

Query: 2878 AVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGAREEKKVCPELIEAIRVECGL 3054
            AVLVS+EP+K+ILYRGWG G  PG   N   +GK  GGA+    V PEL+EAIR+ECGL
Sbjct: 963  AVLVSQEPSKIILYRGWGAGTKPGTYLNDSKLGK-DGGAK--PTVSPELLEAIRIECGL 1018



 Score = 60.8 bits (146), Expect = 7e-06
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
 Frame = +3

Query: 342 IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRT 521
           I  EE   LRR G++++  L +G+ G+ +G V  +H  W+  ELVKI C      ++ +T
Sbjct: 560 ITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQT 619

Query: 522 HEILERKTGGLVV----WRSGSIIILYRGADYKYP 614
              LE ++GG++V       G  II+YRG +Y  P
Sbjct: 620 ALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRP 654



 Score = 60.8 bits (146), Expect = 7e-06
 Identities = 42/141 (29%), Positives = 71/141 (50%)
 Frame = +1

Query: 1477 KLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRMKPFLLLGRRG 1656
            KLS+   ++++ ER  A  E     P +     ++T  E   L K+G  MK  + +G+ G
Sbjct: 121  KLSENEVERQRLERAKAREEKKRRVPTLAE--LSLTDGEIMRLTKLGFEMKQKIKVGKAG 178

Query: 1657 VFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVERVNKGHAIIV 1836
            +  G V  +H  W+  E+V+I+ +D    +++     LE ++GG++V       G  II+
Sbjct: 179  ITEGIVNGIHERWRRSEVVRIVCEDLCRINMKRTHDILERKTGGLVV----WRSGSKIIL 234

Query: 1837 YRGKNYRRPGDLRPKTLLSKK 1899
            YRG +Y+ P  L  K L   K
Sbjct: 235  YRGIDYKYPYFLSDKVLRDDK 255


>ref|XP_008341495.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic [Malus
            domestica]
          Length = 1090

 Score =  476 bits (1226), Expect(2) = 0.0
 Identities = 254/407 (62%), Positives = 298/407 (73%), Gaps = 12/407 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI++KLRSLG+ ES              SAGEIF+P P++LPK+RVGHT+D+SWSTPE
Sbjct: 66   IQRIAEKLRSLGFTESTQNPDRQPDKK---SAGEIFVPIPEKLPKYRVGHTLDASWSTPE 122

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXX--VPMVAELTIAREELKRLRRSG 380
            NPVPEPG G  ++RF EL                     VP +AEL++ + EL+RL   G
Sbjct: 123  NPVPEPGTGGAIARFHELRREVKKQKELEREERKGKGGRVPTLAELSLGKGELRRLTTVG 182

Query: 381  IRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVV 560
            + L K+LK+GKAGITEGIVNGIHE WRRSE+VKI CEDLCRLNMKRTH++LERKTGGLV 
Sbjct: 183  LGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRLNMKRTHDLLERKTGGLVX 242

Query: 561  WRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMI--DTVSTE--QEKNTSSTAA 728
            WR+GS IILYRG +YKYPYF      N   D MSE  S+   DT   +   E  TSS   
Sbjct: 243  WRAGSKIILYRGVNYKYPYFLRD---NVRKDSMSEANSIALPDTHINDGGNESGTSSKND 299

Query: 729  INPLAKAPNNLSYS----SLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWG 896
            +N  A  P+  SY     +LV GVG P +VR QL GE QL EE D +L+GLGPRFTDWWG
Sbjct: 300  VNS-AIVPST-SYERAQPALVQGVGLPGRVRFQLPGEAQLSEENDSMLEGLGPRFTDWWG 357

Query: 897  YEPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNL 1076
             EPLP+DADLLPAI+PG+RKPFRLLP+G+  KLTD EMT +RRL RPLPCHFALGRNRNL
Sbjct: 358  CEPLPIDADLLPAIVPGYRKPFRLLPYGLNSKLTDDEMTTIRRLGRPLPCHFALGRNRNL 417

Query: 1077 QGLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            QGLA S++KLWEKCE+AKIAVKRGVQNTNSE+M EELK+LTGG LL+
Sbjct: 418  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLA 464



 Score =  417 bits (1073), Expect(2) = 0.0
 Identities = 275/616 (44%), Positives = 355/616 (57%), Gaps = 18/616 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            AVS+AIEERR   +R        +SV T                + D      S     K
Sbjct: 482  AVSSAIEERRRHAIR----VERSTSVPTRQDLEPRTEPENKHGWIBDHKMGLPSAR---K 534

Query: 1438 LKPASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVG 1617
            LK   + + R   KLS AL+K+ KAE+LLA LE +      E D+E IT EERYMLRKVG
Sbjct: 535  LKSTEAAVDRTSIKLSMALEKRVKAEKLLADLENAATPQQPEIDKEGITKEERYMLRKVG 594

Query: 1618 LRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILV 1797
            LRMKPFLL+GRRGVF GT+ENMHLHWKYRELVKIIS + SIE V   A+TLEAESGGILV
Sbjct: 595  LRMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIISNEKSIETVHQVAQTLEAESGGILV 654

Query: 1798 AVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRNI 1977
            AVERV+KG+AIIVYRGKNY RP  LRP+TLL+K+ AMKRS+EAQR  SLKLHVL L+ NI
Sbjct: 655  AVERVSKGYAIIVYRGKNYSRPASLRPQTLLTKREAMKRSIEAQRRESLKLHVLKLNENI 714

Query: 1978 DDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLTE 2157
             +L+ Q+ ++  + +   + ES      D        I                 +   +
Sbjct: 715  AELKLQLDEDKESDNTHSVNESRTQLARDKQEAHVIPIS----LNDGVAPVVNXQLATQQ 770

Query: 2158 SNKSEVKDEMNDRSWSIVRDNGSAESSFHQE---NTEEVNVATAEYLHSSNHGSVPDDE- 2325
             N +      ++     V    S ES  ++E   +T E   +     + S   S+ D   
Sbjct: 771  DNMTSFSPTCDEDESGRVEPGSSNESVTNEEDETSTVETGSSNEPVTYESRASSLKDING 830

Query: 2326 ----------EESTITSNNDNWVA--LKQADERSKNEDVQLATESANMADSDSRYISDES 2469
                       E  +  N     A  +K  D      + Q+AT+   +    S +  DE+
Sbjct: 831  EVEGFPSTCCPEDVLARNKQEGHATPMKLEDRTGTVVNGQVATQQDKVLTFSSIWGEDEN 890

Query: 2470 -EFLPEFCLQQEQVSMSATSTLSQFSDEVEA-ELSYATAQSTMDPHIHEDRLKHYSDLEN 2643
             +  P          +S+++T+ +   + EA + S     S  +P +     K+++  E 
Sbjct: 891  GKAEPPVSKSFSTNRLSSSATVVKHRRDNEARDSSRRPGNSESEPSVPVLVRKNFN--ER 948

Query: 2644 PFRAAPLSNRERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGR 2823
            P +A  LSN ERL+LRKQALKM+ RPV+AVGRSNIVTGVAKTIK HF+KHPLAIVN+KGR
Sbjct: 949  PSKAVHLSNNERLLLRKQALKMKNRPVIAVGRSNIVTGVAKTIKAHFEKHPLAIVNVKGR 1008

Query: 2824 AEGTSVQEVIFELEQATGAVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGAREE 3003
            A+GTSV+EV+F+LEQATGAVLVS+EP+KVILYRGWG G+ P    N  + GK    A  +
Sbjct: 1009 AKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGAGDNP--RRNGSNTGK---IASSQ 1063

Query: 3004 KKVCPELIEAIRVECG 3051
              V PEL+ AIR+ECG
Sbjct: 1064 GAVSPELLAAIRLECG 1079


>gb|KDO72354.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1062

 Score =  479 bits (1232), Expect(2) = 0.0
 Identities = 247/406 (60%), Positives = 292/406 (71%), Gaps = 11/406 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXX----GSAGEIFIPTPQELPKHRVGHTIDSSW 200
            IQRI+DKLRSLG +E                   +AGEIFIP P  +PK+RVGHTID SW
Sbjct: 68   IQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSW 127

Query: 201  STPENPVPEPGAGLS--RFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKR 365
            STPENPVP PG G +  R+ +L                      VP +AEL ++ +EL+R
Sbjct: 128  STPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRR 187

Query: 366  LRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKT 545
            LR  GI L K+LK+GKAGITEGIVNGIHERWR +E+VKI CEDLCRLNMKRTH+ LERKT
Sbjct: 188  LRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKT 247

Query: 546  GGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTA 725
            GGLVVWRSGS IILYRGADYKYPYF   +              ++D    ++ K  SS A
Sbjct: 248  GGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGA 307

Query: 726  -AINPLAKAPNNLSYS-SLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGY 899
             +  P  ++P N     +L+  VGSP+K+R QL GE +L EEADRLLDGLGPRFTDWWGY
Sbjct: 308  DSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGY 367

Query: 900  EPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQ 1079
            +P PVDADLLPA +PG+R+PFRLLP+GV+PKLT+ EMT LRRL RPLPCHFALGRNRNLQ
Sbjct: 368  DPQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQ 427

Query: 1080 GLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            GLA +++KLWEKCE+AKIAVKRG QNTNSE+M +ELK+LTGG LLS
Sbjct: 428  GLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLS 473



 Score =  407 bits (1046), Expect(2) = 0.0
 Identities = 259/607 (42%), Positives = 354/607 (58%), Gaps = 8/607 (1%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            A S+AIEERR  E      +S+DS                  DE     ++  ++  + K
Sbjct: 491  AASSAIEERRKHEF----STSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQK 546

Query: 1438 LKPASSV-MKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
             + ++ V ++R   +LS+ L+KK +AE+LLA LE        E D+E IT EERYMLRKV
Sbjct: 547  ERRSAEVAIRRTNIRLSRVLEKKAEAEKLLAELEEERPEQY-EVDKEGITEEERYMLRKV 605

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMK FLL+GRRGVF GTVENMHLHWK+RELVKIISK   IE     ARTLE ESGGIL
Sbjct: 606  GLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGIL 665

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERVNKG+AII+YRGKNY RP  LRPKTLL+K+ AMKRSLEAQR  SLKLHVL L+RN
Sbjct: 666  VAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRN 725

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            I+ L+ Q+VK+                      +++ S+E                MQ  
Sbjct: 726  IEKLKLQLVKD----------------------KEANSLETIDESILPLVKEEIGDMQPA 763

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 2334
            E  +S+   E+N      V+  G   +      + +   AT +        ++  D++  
Sbjct: 764  ECMRSDTSHEVN------VQARGECGADLTSTESNDTGDATID-----GPPAIQQDKQTE 812

Query: 2335 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCL-----QQ 2499
            ++T N    +++ + + +S  + V   ++   +AD  +  ++  +   P+  +     + 
Sbjct: 813  SLTHNG---ISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMCSSDNEP 869

Query: 2500 EQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRER 2679
             + S+ +  + S  ++ +E     A  +S +   I    + +    EN  RA  LSNR+R
Sbjct: 870  RESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWN----ENNSRAIQLSNRDR 925

Query: 2680 LILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFE 2859
            L+LRKQAL+M+KRPVLAVGRSNIVTGVAK IK HF+K+PLAIVN+KGRA+GTSVQEV+ +
Sbjct: 926  LLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAK 985

Query: 2860 LEQATGAVLVSREPNKVILYRGWG--EGETPGCDPNKKDVGKGSGGAREEKKVCPELIEA 3033
            LE+ATGAVLVS+EP+KVILYRGWG  +  +P    N +         R    V  EL+ A
Sbjct: 986  LEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAA 1045

Query: 3034 IRVECGL 3054
            I++ECGL
Sbjct: 1046 IKLECGL 1052


>gb|KNA24276.1| hypothetical protein SOVF_017130 [Spinacia oleracea]
          Length = 1044

 Score =  468 bits (1203), Expect(2) = 0.0
 Identities = 229/398 (57%), Positives = 297/398 (74%), Gaps = 3/398 (0%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI++KLR+LG+ E                 G+IFIP  +++P  RVGHT+DSSWS+P+
Sbjct: 68   IQRIAEKLRTLGFEEERNKDTHFPQDDNDSEIGKIFIPNSRQIPNFRVGHTLDSSWSSPQ 127

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            +PVP+PG+G  + +   L                    P +AELT++  EL+RLR  GIR
Sbjct: 128  SPVPDPGSGNTIVKINGLSRVAKREREEEREKVEGEKEPTLAELTLSSTELRRLRTVGIR 187

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            +++++K+GKAGITEG++NGIHERWR +E+VKI CED+CRLNMKRTH++LE+KTGG+VVWR
Sbjct: 188  MKQKMKLGKAGITEGVLNGIHERWRSNEVVKIVCEDICRLNMKRTHDLLEKKTGGMVVWR 247

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNL-DKMSEDPSMIDTVSTEQEKNTSSTAAINPLA 743
            +GS I+LYRG +YKYPYFS  +    N  +   E    I+  + E+E +   +   + + 
Sbjct: 248  TGSKIVLYRGVNYKYPYFSLDEAACKNCYENAIEADDGIE--AREEELSAEMSVDESAVQ 305

Query: 744  KAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVDAD 923
             +   L  SSLV GVGSP++VR  L GE QL EEAD LLDGLGPRFTDWWGYEPLP+DAD
Sbjct: 306  SSTRILGQSSLVPGVGSPDRVRFLLPGESQLVEEADSLLDGLGPRFTDWWGYEPLPIDAD 365

Query: 924  LLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSMIK 1103
            LLPA++PG+R+PFRLLP+GVKP+LT+ EMT+L+RL RPLPCHFALGRNRNLQGLA +++K
Sbjct: 366  LLPAVVPGYRRPFRLLPYGVKPQLTNDEMTVLKRLGRPLPCHFALGRNRNLQGLAAAILK 425

Query: 1104 LWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            LWEKCE+AK+AVKRGVQNTNS++M EELK+LTGGVLLS
Sbjct: 426  LWEKCEIAKVAVKRGVQNTNSDLMAEELKRLTGGVLLS 463



 Score =  418 bits (1075), Expect(2) = 0.0
 Identities = 266/605 (43%), Positives = 358/605 (59%), Gaps = 3/605 (0%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            AVS+AIE RR + V    Q ++DS   +T                +D +E+ K      +
Sbjct: 481  AVSSAIEHRRRNRVHGNGQVANDSLTKSTENIKLDTEGHEAAPA-SDTSEDQKIRMASQE 539

Query: 1438 LKPAS--SVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRK 1611
             K  S  + + R   KLS AL+++ KAE+LL+ LE +  +   E D+E IT EERYMLR+
Sbjct: 540  RKKMSIQTTISRTSRKLSTALEERAKAEKLLSELEQAEISQQAEVDKEGITEEERYMLRR 599

Query: 1612 VGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGI 1791
            VGLRM PFLLLGRRGVF GT+ENMHLHWKYRELVKII     I+ + + AR LEAESGG+
Sbjct: 600  VGLRMDPFLLLGRRGVFDGTIENMHLHWKYRELVKIICGGRDIDEINNIARILEAESGGV 659

Query: 1792 LVAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSR 1971
            LVAVERV KGHAIIVYRGKNY+RP  LRP+TLL+KK A+KRS+EAQR  SLKL VL L++
Sbjct: 660  LVAVERVRKGHAIIVYRGKNYQRPASLRPQTLLNKKEALKRSIEAQRRESLKLSVLKLAK 719

Query: 1972 NIDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQL 2151
            NID L+ ++V++  T+D  +  E + S++E   NE                         
Sbjct: 720  NIDKLKLKLVEDKETLD-YQAGEQDMSQLEPGENE------------------------- 753

Query: 2152 TESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYL-HSSNHGSVPDDEE 2328
              S  S    E  + S SI ++      S + +  E  N ++ E L   SN  SV  ++ 
Sbjct: 754  LNSTTSVHNKESQEDSPSIHKEKLVIIPSLYNKTDEGANESSVESLCPKSNSNSVKKEQA 813

Query: 2329 ESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQEQV 2508
             + ++  +D+        E + +E +Q+A+ ++  A         ES F P     +  +
Sbjct: 814  NAEVSLCDDDL-------EANCSERLQVASNNSGNAS------CKESLFHPTGNESEPII 860

Query: 2509 SMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERLIL 2688
            +  +           E   SY  + + +   +   +    +    P +A PL+N+ERL+L
Sbjct: 861  TSMSEDNFEHGIVSNETRDSYKNSDNKVAIPLPLHKAAGRNSHAVPAKARPLTNKERLLL 920

Query: 2689 RKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFELEQ 2868
            RKQALKMRKRPVLAVGRSN+VTGVAK IK HFKK+PLAIVN+KGRA+GTSVQEV+ +LE+
Sbjct: 921  RKQALKMRKRPVLAVGRSNVVTGVAKAIKDHFKKYPLAIVNVKGRAKGTSVQEVVLKLEE 980

Query: 2869 ATGAVLVSREPNKVILYRGWGEGETPGCDPNKKDVGKGSGGAREEKKVCPELIEAIRVEC 3048
             TG VLVS+EP+KVILYRGWG G   G   NK++  K   G      V PEL+ A+R+EC
Sbjct: 981  ETGGVLVSQEPSKVILYRGWGGGVETGHASNKENHDK-RAGVPSLAAVSPELLAAMRLEC 1039

Query: 3049 GLSTS 3063
            GLS+S
Sbjct: 1040 GLSSS 1044



 Score = 63.2 bits (152), Expect = 2e-06
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
 Frame = +3

Query: 342 IAREELKRLRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKC--EDLCRLNMK 515
           I  EE   LRR G+R++  L +G+ G+ +G +  +H  W+  ELVKI C   D+  +N  
Sbjct: 589 ITEEERYMLRRVGLRMDPFLLLGRRGVFDGTIENMHLHWKYRELVKIICGGRDIDEIN-- 646

Query: 516 RTHEILERKTGGLVV----WRSGSIIILYRGADYKYP 614
               ILE ++GG++V     R G  II+YRG +Y+ P
Sbjct: 647 NIARILEAESGGVLVAVERVRKGHAIIVYRGKNYQRP 683



 Score = 61.6 bits (148), Expect = 4e-06
 Identities = 39/128 (30%), Positives = 68/128 (53%)
 Frame = +1

Query: 1480 LSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRMKPFLLLGRRGV 1659
            LS+  +++ + ER    +EG     + E     ++  E   LR VG+RMK  + LG+ G+
Sbjct: 145  LSRVAKREREEER--EKVEGEKEPTLAEL---TLSSTELRRLRTVGIRMKQKMKLGKAGI 199

Query: 1660 FAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVERVNKGHAIIVY 1839
              G +  +H  W+  E+VKI+ +D    +++     LE ++GG++V       G  I++Y
Sbjct: 200  TEGVLNGIHERWRSNEVVKIVCEDICRLNMKRTHDLLEKKTGGMVV----WRTGSKIVLY 255

Query: 1840 RGKNYRRP 1863
            RG NY+ P
Sbjct: 256  RGVNYKYP 263


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  475 bits (1223), Expect(2) = 0.0
 Identities = 245/406 (60%), Positives = 291/406 (71%), Gaps = 11/406 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXX----GSAGEIFIPTPQELPKHRVGHTIDSSW 200
            IQRI+DKLRSLG +E                   +AGEIFIP P  +PK+RVGHTID SW
Sbjct: 68   IQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSW 127

Query: 201  STPENPVPEPGAGLS--RFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKR 365
            STPENP+P PG G +  R+ +L                      VP +AEL ++ +EL+R
Sbjct: 128  STPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRR 187

Query: 366  LRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKT 545
            LR  GI L K+LK+GKAGITEGIVNGIHERWR +E+VKI CEDLCRLNMKRTH+ LERKT
Sbjct: 188  LRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKT 247

Query: 546  GGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTA 725
            GGLVVWRSGS IILYRGADYKYPYF   +              ++D    ++ K  SS A
Sbjct: 248  GGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGA 307

Query: 726  -AINPLAKAPNNLSYS-SLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGY 899
             +  P  ++P N     +L+  VGSP+K+R QL GE +L EEADRLLDGLGPRFTDWWGY
Sbjct: 308  DSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGY 367

Query: 900  EPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQ 1079
            +P PVDADLL A +PG+R+PFRLLP+GV+PKLT+ EMT LRRL RPLPCHFALGRNRNLQ
Sbjct: 368  DPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQ 427

Query: 1080 GLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            GLA +++KLWEKCE+AKIAVKRG QNTNSE+M +ELK+LTGG LLS
Sbjct: 428  GLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLS 473



 Score =  409 bits (1051), Expect(2) = 0.0
 Identities = 260/607 (42%), Positives = 354/607 (58%), Gaps = 8/607 (1%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            A S AIEERR  E      +S+DS                  DE     ++  ++  + K
Sbjct: 491  AASCAIEERRKHEF----STSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQK 546

Query: 1438 LKPASSV-MKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
             + ++ V ++R   +LS+AL+KK +AE+LLA LE        E D+E IT EERYMLRKV
Sbjct: 547  ERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKV 605

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMK FLL+GRRGVF GTVENMHLHWK+RELVKIISK   IE     ARTLE ESGGIL
Sbjct: 606  GLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGIL 665

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERVNKG+AII+YRGKNY RP  LRPKTLL+K+ AMKRSLEAQR  SLKLHVL L+RN
Sbjct: 666  VAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRN 725

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            I+ L+ Q+VK+                      +++ S+E                MQ  
Sbjct: 726  IEKLKLQLVKD----------------------KEANSLETIDESILPLVKEEIGDMQPA 763

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 2334
            E  +S+   E+N      V+  G   +      + +   AT +        ++  D++  
Sbjct: 764  ECMRSDTSHEVN------VQARGECGADLTSTESNDTGDATID-----GPPAIQQDKQTE 812

Query: 2335 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCL-----QQ 2499
            ++T N    +++ + + +S  + V   ++   +AD  +  ++  +   P+  +     + 
Sbjct: 813  SLTHNG---ISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMCSSDNEP 869

Query: 2500 EQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRER 2679
             + S+ +  + S  ++ +E     A  +S +   I    + +    EN  RA  LSNR+R
Sbjct: 870  RESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWN----ENNSRAIQLSNRDR 925

Query: 2680 LILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFE 2859
            L+LRKQAL+M+KRPVLAVGRSNIVTGVAK IK HF+K+PLAIVN+KGRA+GTSVQEV+ +
Sbjct: 926  LLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAK 985

Query: 2860 LEQATGAVLVSREPNKVILYRGWG--EGETPGCDPNKKDVGKGSGGAREEKKVCPELIEA 3033
            LE+ATGAVLVS+EP+KVILYRGWG  +  +P    N +         R    V  EL+ A
Sbjct: 986  LEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAA 1045

Query: 3034 IRVECGL 3054
            I++ECGL
Sbjct: 1046 IKLECGL 1052


>gb|KDO72351.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
            gi|641853534|gb|KDO72352.1| hypothetical protein
            CISIN_1g001441mg [Citrus sinensis]
            gi|641853535|gb|KDO72353.1| hypothetical protein
            CISIN_1g001441mg [Citrus sinensis]
          Length = 1076

 Score =  479 bits (1232), Expect(2) = 0.0
 Identities = 247/406 (60%), Positives = 292/406 (71%), Gaps = 11/406 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXX----GSAGEIFIPTPQELPKHRVGHTIDSSW 200
            IQRI+DKLRSLG +E                   +AGEIFIP P  +PK+RVGHTID SW
Sbjct: 68   IQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSW 127

Query: 201  STPENPVPEPGAGLS--RFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKR 365
            STPENPVP PG G +  R+ +L                      VP +AEL ++ +EL+R
Sbjct: 128  STPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRR 187

Query: 366  LRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKT 545
            LR  GI L K+LK+GKAGITEGIVNGIHERWR +E+VKI CEDLCRLNMKRTH+ LERKT
Sbjct: 188  LRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKT 247

Query: 546  GGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTA 725
            GGLVVWRSGS IILYRGADYKYPYF   +              ++D    ++ K  SS A
Sbjct: 248  GGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGA 307

Query: 726  -AINPLAKAPNNLSYS-SLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGY 899
             +  P  ++P N     +L+  VGSP+K+R QL GE +L EEADRLLDGLGPRFTDWWGY
Sbjct: 308  DSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGY 367

Query: 900  EPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQ 1079
            +P PVDADLLPA +PG+R+PFRLLP+GV+PKLT+ EMT LRRL RPLPCHFALGRNRNLQ
Sbjct: 368  DPQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQ 427

Query: 1080 GLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            GLA +++KLWEKCE+AKIAVKRG QNTNSE+M +ELK+LTGG LLS
Sbjct: 428  GLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLS 473



 Score =  404 bits (1039), Expect(2) = 0.0
 Identities = 263/617 (42%), Positives = 359/617 (58%), Gaps = 18/617 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            A S+AIEERR  E      +S+DS                  DE     ++  ++  + K
Sbjct: 491  AASSAIEERRKHEF----STSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQK 546

Query: 1438 LKPASSV-MKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
             + ++ V ++R   +LS+ L+KK +AE+LLA LE        E D+E IT EERYMLRKV
Sbjct: 547  ERRSAEVAIRRTNIRLSRVLEKKAEAEKLLAELEEERPEQY-EVDKEGITEEERYMLRKV 605

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMK FLL+GRRGVF GTVENMHLHWK+RELVKIISK   IE     ARTLE ESGGIL
Sbjct: 606  GLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGIL 665

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERVNKG+AII+YRGKNY RP  LRPKTLL+K+ AMKRSLEAQR  SLKLHVL L+RN
Sbjct: 666  VAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRN 725

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            I+ L+ Q+VK+                      +++ S+E                MQ  
Sbjct: 726  IEKLKLQLVKD----------------------KEANSLETIDESILPLVKEEIGDMQPA 763

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 2334
            E  +S+   E+N      V+  G   +      + +   AT +        ++  D++  
Sbjct: 764  ECMRSDTSHEVN------VQARGECGADLTSTESNDTGDATID-----GPPAIQQDKQTE 812

Query: 2335 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQ--EQV 2508
            ++T N    +++ + + +S  + V   ++   +AD  +  ++  +   P+  +Q+  E  
Sbjct: 813  SLTHNG---ISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYN 869

Query: 2509 SMSATSTLSQFSDEVEAELSYATAQSTMDPHIHE--DRLKHYSDL-----------ENPF 2649
            ++      S  ++  E+ +  A ++S+ +  I +  +  K  S L           EN  
Sbjct: 870  TIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNS 929

Query: 2650 RAAPLSNRERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAE 2829
            RA  LSNR+RL+LRKQAL+M+KRPVLAVGRSNIVTGVAK IK HF+K+PLAIVN+KGRA+
Sbjct: 930  RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAK 989

Query: 2830 GTSVQEVIFELEQATGAVLVSREPNKVILYRGWG--EGETPGCDPNKKDVGKGSGGAREE 3003
            GTSVQEV+ +LE+ATGAVLVS+EP+KVILYRGWG  +  +P    N +         R  
Sbjct: 990  GTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPW 1049

Query: 3004 KKVCPELIEAIRVECGL 3054
              V  EL+ AI++ECGL
Sbjct: 1050 PAVSRELLAAIKLECGL 1066


>gb|ERN10689.1| hypothetical protein AMTR_s00028p00245370 [Amborella trichopoda]
          Length = 1042

 Score =  482 bits (1241), Expect(2) = 0.0
 Identities = 253/400 (63%), Positives = 297/400 (74%), Gaps = 5/400 (1%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI++KL+SLGY+E              GS GEIFIP  + L K RVG T+D SWSTPE
Sbjct: 64   IQRIAEKLKSLGYVEELNDSEPQCTGP--GSPGEIFIPRLENLAKIRVGSTLDKSWSTPE 121

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            NPVPEPG+G  +SRF  L                    P +AEL I   EL+RLR  GI 
Sbjct: 122  NPVPEPGSGSAISRFHVL----RKEAKKNAVKGERGSAPSLAELRIPEAELQRLRSIGIC 177

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            LEK+L VGK G+TEGIVNGIHERWRRSELVKIKC+DL  +NMKRTHEILE KTGG+V+ R
Sbjct: 178  LEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVICR 237

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLD--KMSEDPSMIDTVSTEQEKNTSSTAAINPL 740
            SGSIIILYRGA+Y YPYF  G+ ++ N D  ++S   S++    + +E  T+S   +  +
Sbjct: 238  SGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGSNEENKTNSLPRVGGI 297

Query: 741  -AKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVD 917
             A     ++  S+V+GVGSPNKVR QL GE QL++EADRLLDGLGPRFTDWWGY PLPVD
Sbjct: 298  SAVEATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGYGPLPVD 357

Query: 918  ADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSM 1097
            ADLLPA + G+RKPFRLLP+GVKPKLTD EMT LRRL RPLPCHFALGRNRNLQGLA S+
Sbjct: 358  ADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQGLATSI 417

Query: 1098 IKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            ++LWEKCE+AKIAVKRGVQNTNSE+M EELK+LTGG LLS
Sbjct: 418  VRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLS 457



 Score =  400 bits (1029), Expect(2) = 0.0
 Identities = 263/613 (42%), Positives = 348/613 (56%), Gaps = 14/613 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSH---DSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTI 1428
            AVS+AIEERR  +V R +   +   D S   +              EL D   + +    
Sbjct: 475  AVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEEKLS 534

Query: 1429 KSKLKP--ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYM 1602
            K +LKP   +  MKR++ KLS+AL+KK+ AER LA LE        + D+E IT EERYM
Sbjct: 535  KDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEERYM 594

Query: 1603 LRKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAES 1782
            LRKVGLRMK FLLLGRRGVF GT+ENMHLHWKYREL+KIISKD SI  V  AARTLEAES
Sbjct: 595  LRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLEAES 654

Query: 1783 GGILVAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLS 1962
            GGILV+VE VNKGHAIIVYRGKNY+RP +LRP+ LL+K+ AMK SLEAQR          
Sbjct: 655  GGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQR---------- 704

Query: 1963 LSRNIDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXS 2142
              R   D    +   HST    R + S+  E+ ++ +                       
Sbjct: 705  --REAKD-DRVVASPHST----RYLGSSNCELGNTEHTLGS----------LDYSNHFKD 747

Query: 2143 MQLTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDD 2322
            M+  ++++  +    +D    +   NG   S+ + ++ ++V V            S  D 
Sbjct: 748  MENGDASQGPLHSSSSDDEDVVTPSNGVRWSTSYADDAQQVVVKRR--FPRDFEKSPKDV 805

Query: 2323 EEESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQE 2502
                T+ S + + V+  +A+ER + E     TE   + +  +   ++    LP      E
Sbjct: 806  SSSKTVVSRSCSCVSQDEAEERLELEP-DFHTEDIMLHNKPALATTEGEPLLPPMI---E 861

Query: 2503 QVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERL 2682
               +S+           +A L   ++   +D  +          +E  F+A  LSN+ERL
Sbjct: 862  PTGLSS-----------KAPLGNTSSSKPLDKRVSS------IGVETSFKAQSLSNKERL 904

Query: 2683 ILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFEL 2862
            ILRKQAL M+KRPVLA+GR+NIVTGVA+ IKTHFKK+PLAIVN+KGRA+GTSVQEV+F+L
Sbjct: 905  ILRKQALTMKKRPVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEVVFKL 964

Query: 2863 EQATGAVLVSREPNKVILYRGWGEGETPGCDPNK---------KDVGKGSGGAREEKKVC 3015
            EQATGAVLVS+EPNKVILYRGWG G+      +K         K +G+   G    K   
Sbjct: 965  EQATGAVLVSQEPNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNGFVGVKDAS 1024

Query: 3016 PELIEAIRVECGL 3054
            P+L+ A+R+ECGL
Sbjct: 1025 PQLLAAMRLECGL 1037



 Score = 63.5 bits (153), Expect = 1e-06
 Identities = 42/139 (30%), Positives = 66/139 (47%)
 Frame = +1

Query: 1447 ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRM 1626
            + S + R      +A +   K ER  A     +  P  E  R          LR +G+ +
Sbjct: 129  SGSAISRFHVLRKEAKKNAVKGERGSAPSLAELRIPEAELQR----------LRSIGICL 178

Query: 1627 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVE 1806
            +  L++G+ GV  G V  +H  W+  ELVKI  +D S+ +++     LE ++GGI++   
Sbjct: 179  EKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVIC-- 236

Query: 1807 RVNKGHAIIVYRGKNYRRP 1863
                G  II+YRG NY  P
Sbjct: 237  --RSGSIIILYRGANYTYP 253


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  475 bits (1223), Expect(2) = 0.0
 Identities = 245/406 (60%), Positives = 291/406 (71%), Gaps = 11/406 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXX----GSAGEIFIPTPQELPKHRVGHTIDSSW 200
            IQRI+DKLRSLG +E                   +AGEIFIP P  +PK+RVGHTID SW
Sbjct: 68   IQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSW 127

Query: 201  STPENPVPEPGAGLS--RFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKR 365
            STPENP+P PG G +  R+ +L                      VP +AEL ++ +EL+R
Sbjct: 128  STPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRR 187

Query: 366  LRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKT 545
            LR  GI L K+LK+GKAGITEGIVNGIHERWR +E+VKI CEDLCRLNMKRTH+ LERKT
Sbjct: 188  LRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKT 247

Query: 546  GGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTA 725
            GGLVVWRSGS IILYRGADYKYPYF   +              ++D    ++ K  SS A
Sbjct: 248  GGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGA 307

Query: 726  -AINPLAKAPNNLSYS-SLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGY 899
             +  P  ++P N     +L+  VGSP+K+R QL GE +L EEADRLLDGLGPRFTDWWGY
Sbjct: 308  DSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGY 367

Query: 900  EPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQ 1079
            +P PVDADLL A +PG+R+PFRLLP+GV+PKLT+ EMT LRRL RPLPCHFALGRNRNLQ
Sbjct: 368  DPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQ 427

Query: 1080 GLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            GLA +++KLWEKCE+AKIAVKRG QNTNSE+M +ELK+LTGG LLS
Sbjct: 428  GLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLS 473



 Score =  406 bits (1044), Expect(2) = 0.0
 Identities = 264/617 (42%), Positives = 359/617 (58%), Gaps = 18/617 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            A S AIEERR  E      +S+DS                  DE     ++  ++  + K
Sbjct: 491  AASCAIEERRKHEF----STSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQK 546

Query: 1438 LKPASSV-MKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
             + ++ V ++R   +LS+AL+KK +AE+LLA LE        E D+E IT EERYMLRKV
Sbjct: 547  ERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY-EVDKEGITEEERYMLRKV 605

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMK FLL+GRRGVF GTVENMHLHWK+RELVKIISK   IE     ARTLE ESGGIL
Sbjct: 606  GLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGIL 665

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERVNKG+AII+YRGKNY RP  LRPKTLL+K+ AMKRSLEAQR  SLKLHVL L+RN
Sbjct: 666  VAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRN 725

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            I+ L+ Q+VK+                      +++ S+E                MQ  
Sbjct: 726  IEKLKLQLVKD----------------------KEANSLETIDESILPLVKEEIGDMQPA 763

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 2334
            E  +S+   E+N      V+  G   +      + +   AT +        ++  D++  
Sbjct: 764  ECMRSDTSHEVN------VQARGECGADLTSTESNDTGDATID-----GPPAIQQDKQTE 812

Query: 2335 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQ--EQV 2508
            ++T N    +++ + + +S  + V   ++   +AD  +  ++  +   P+  +Q+  E  
Sbjct: 813  SLTHNG---ISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYN 869

Query: 2509 SMSATSTLSQFSDEVEAELSYATAQSTMDPHIHE--DRLKHYSDL-----------ENPF 2649
            ++      S  ++  E+ +  A ++S+ +  I +  +  K  S L           EN  
Sbjct: 870  TIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNS 929

Query: 2650 RAAPLSNRERLILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAE 2829
            RA  LSNR+RL+LRKQAL+M+KRPVLAVGRSNIVTGVAK IK HF+K+PLAIVN+KGRA+
Sbjct: 930  RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAK 989

Query: 2830 GTSVQEVIFELEQATGAVLVSREPNKVILYRGWG--EGETPGCDPNKKDVGKGSGGAREE 3003
            GTSVQEV+ +LE+ATGAVLVS+EP+KVILYRGWG  +  +P    N +         R  
Sbjct: 990  GTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPW 1049

Query: 3004 KKVCPELIEAIRVECGL 3054
              V  EL+ AI++ECGL
Sbjct: 1050 PAVSRELLAAIKLECGL 1066


>ref|XP_011625145.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Amborella trichopoda]
          Length = 1050

 Score =  482 bits (1241), Expect(2) = 0.0
 Identities = 253/400 (63%), Positives = 297/400 (74%), Gaps = 5/400 (1%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXXGSAGEIFIPTPQELPKHRVGHTIDSSWSTPE 212
            IQRI++KL+SLGY+E              GS GEIFIP  + L K RVG T+D SWSTPE
Sbjct: 64   IQRIAEKLKSLGYVEELNDSEPQCTGP--GSPGEIFIPRLENLAKIRVGSTLDKSWSTPE 121

Query: 213  NPVPEPGAG--LSRFRELWXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKRLRRSGIR 386
            NPVPEPG+G  +SRF  L                    P +AEL I   EL+RLR  GI 
Sbjct: 122  NPVPEPGSGSAISRFHVL----RKEAKKNAVKGERGSAPSLAELRIPEAELQRLRSIGIC 177

Query: 387  LEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKTGGLVVWR 566
            LEK+L VGK G+TEGIVNGIHERWRRSELVKIKC+DL  +NMKRTHEILE KTGG+V+ R
Sbjct: 178  LEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVICR 237

Query: 567  SGSIIILYRGADYKYPYFSNGDQINSNLD--KMSEDPSMIDTVSTEQEKNTSSTAAINPL 740
            SGSIIILYRGA+Y YPYF  G+ ++ N D  ++S   S++    + +E  T+S   +  +
Sbjct: 238  SGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGSNEENKTNSLPRVGGI 297

Query: 741  -AKAPNNLSYSSLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGYEPLPVD 917
             A     ++  S+V+GVGSPNKVR QL GE QL++EADRLLDGLGPRFTDWWGY PLPVD
Sbjct: 298  SAVEATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGYGPLPVD 357

Query: 918  ADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQGLAVSM 1097
            ADLLPA + G+RKPFRLLP+GVKPKLTD EMT LRRL RPLPCHFALGRNRNLQGLA S+
Sbjct: 358  ADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQGLATSI 417

Query: 1098 IKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            ++LWEKCE+AKIAVKRGVQNTNSE+M EELK+LTGG LLS
Sbjct: 418  VRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLS 457



 Score =  399 bits (1025), Expect(2) = 0.0
 Identities = 264/614 (42%), Positives = 342/614 (55%), Gaps = 15/614 (2%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSH---DSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTI 1428
            AVS+AIEERR  +V R +   +   D S   +              EL D   + +    
Sbjct: 475  AVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEEKLS 534

Query: 1429 KSKLKP--ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYM 1602
            K +LKP   +  MKR++ KLS+AL+KK+ AER LA LE        + D+E IT EERYM
Sbjct: 535  KDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEERYM 594

Query: 1603 LRKVGLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAES 1782
            LRKVGLRMK FLLLGRRGVF GT+ENMHLHWKYREL+KIISKD SI  V  AARTLEAES
Sbjct: 595  LRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLEAES 654

Query: 1783 GGILVAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLS 1962
            GGILV+VE VNKGHAIIVYRGKNY+RP +LRP+ LL+K+ AMK SLEAQR          
Sbjct: 655  GGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQR---------- 704

Query: 1963 LSRNIDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXS 2142
              R   D    +   HST    R + S+  E+ ++ +                       
Sbjct: 705  --REAKD-DRVVASPHST----RYLGSSNCELGNTEHTLGSLDYSNHFKDMENGDASQGP 757

Query: 2143 MQLTESNKSEVKDEMNDRSWSI-VRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPD 2319
            +  + S+  +V    N   WS    D+    +  H +      V            S  D
Sbjct: 758  LHSSSSDDEDVVTPSNGVRWSTSYADDAQVLTPSHGKQ-----VVVKRRFPRDFEKSPKD 812

Query: 2320 DEEESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQ 2499
                 T+ S + + V+  +A+ER + E     TE   + +  +   ++    LP      
Sbjct: 813  VSSSKTVVSRSCSCVSQDEAEERLELEP-DFHTEDIMLHNKPALATTEGEPLLPPMI--- 868

Query: 2500 EQVSMSATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRER 2679
            E   +S+           +A L   ++   +D  +          +E  F+A  LSN+ER
Sbjct: 869  EPTGLSS-----------KAPLGNTSSSKPLDKRVSS------IGVETSFKAQSLSNKER 911

Query: 2680 LILRKQALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFE 2859
            LILRKQAL M+KRPVLA+GR+NIVTGVA+ IKTHFKK+PLAIVN+KGRA+GTSVQEV+F+
Sbjct: 912  LILRKQALTMKKRPVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEVVFK 971

Query: 2860 LEQATGAVLVSREPNKVILYRGWGEGETPGCDPNK---------KDVGKGSGGAREEKKV 3012
            LEQATGAVLVS+EPNKVILYRGWG G+      +K         K +G+   G    K  
Sbjct: 972  LEQATGAVLVSQEPNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNGFVGVKDA 1031

Query: 3013 CPELIEAIRVECGL 3054
             P+L+ A+R+ECGL
Sbjct: 1032 SPQLLAAMRLECGL 1045



 Score = 63.5 bits (153), Expect = 1e-06
 Identities = 42/139 (30%), Positives = 66/139 (47%)
 Frame = +1

Query: 1447 ASSVMKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKVGLRM 1626
            + S + R      +A +   K ER  A     +  P  E  R          LR +G+ +
Sbjct: 129  SGSAISRFHVLRKEAKKNAVKGERGSAPSLAELRIPEAELQR----------LRSIGICL 178

Query: 1627 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGILVAVE 1806
            +  L++G+ GV  G V  +H  W+  ELVKI  +D S+ +++     LE ++GGI++   
Sbjct: 179  EKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETKTGGIVIC-- 236

Query: 1807 RVNKGHAIIVYRGKNYRRP 1863
                G  II+YRG NY  P
Sbjct: 237  --RSGSIIILYRGANYTYP 253


>gb|KDO72355.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1050

 Score =  479 bits (1232), Expect(2) = 0.0
 Identities = 247/406 (60%), Positives = 292/406 (71%), Gaps = 11/406 (2%)
 Frame = +3

Query: 33   IQRISDKLRSLGYLESXXXXXXXXXXXXX----GSAGEIFIPTPQELPKHRVGHTIDSSW 200
            IQRI+DKLRSLG +E                   +AGEIFIP P  +PK+RVGHTID SW
Sbjct: 68   IQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSW 127

Query: 201  STPENPVPEPGAGLS--RFREL---WXXXXXXXXXXXXXXXXXXVPMVAELTIAREELKR 365
            STPENPVP PG G +  R+ +L                      VP +AEL ++ +EL+R
Sbjct: 128  STPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRR 187

Query: 366  LRRSGIRLEKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDLCRLNMKRTHEILERKT 545
            LR  GI L K+LK+GKAGITEGIVNGIHERWR +E+VKI CEDLCRLNMKRTH+ LERKT
Sbjct: 188  LRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKT 247

Query: 546  GGLVVWRSGSIIILYRGADYKYPYFSNGDQINSNLDKMSEDPSMIDTVSTEQEKNTSSTA 725
            GGLVVWRSGS IILYRGADYKYPYF   +              ++D    ++ K  SS A
Sbjct: 248  GGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGA 307

Query: 726  -AINPLAKAPNNLSYS-SLVIGVGSPNKVRLQLSGEVQLEEEADRLLDGLGPRFTDWWGY 899
             +  P  ++P N     +L+  VGSP+K+R QL GE +L EEADRLLDGLGPRFTDWWGY
Sbjct: 308  DSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGY 367

Query: 900  EPLPVDADLLPAIIPGFRKPFRLLPFGVKPKLTDREMTILRRLSRPLPCHFALGRNRNLQ 1079
            +P PVDADLLPA +PG+R+PFRLLP+GV+PKLT+ EMT LRRL RPLPCHFALGRNRNLQ
Sbjct: 368  DPQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQ 427

Query: 1080 GLAVSMIKLWEKCEVAKIAVKRGVQNTNSEIMVEELKQLTGGVLLS 1217
            GLA +++KLWEKCE+AKIAVKRG QNTNSE+M +ELK+LTGG LLS
Sbjct: 428  GLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLS 473



 Score =  401 bits (1031), Expect(2) = 0.0
 Identities = 259/602 (43%), Positives = 346/602 (57%), Gaps = 3/602 (0%)
 Frame = +1

Query: 1258 AVSTAIEERRNSEVRRLKQSSHDSSVHTTXXXXXXXXXXXXVDELTDATEETKSVTIKSK 1437
            A S+AIEERR  E      +S+DS                  DE     ++  ++  + K
Sbjct: 491  AASSAIEERRKHEF----STSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQK 546

Query: 1438 LKPASSV-MKRVEAKLSQALQKKEKAERLLATLEGSVGAPIVESDREAITVEERYMLRKV 1614
             + ++ V ++R   +LS+ L+KK +AE+LLA LE        E D+E IT EERYMLRKV
Sbjct: 547  ERRSAEVAIRRTNIRLSRVLEKKAEAEKLLAELEEERPEQY-EVDKEGITEEERYMLRKV 605

Query: 1615 GLRMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIISKDWSIEHVESAARTLEAESGGIL 1794
            GLRMK FLL+GRRGVF GTVENMHLHWK+RELVKIISK   IE     ARTLE ESGGIL
Sbjct: 606  GLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGIL 665

Query: 1795 VAVERVNKGHAIIVYRGKNYRRPGDLRPKTLLSKKAAMKRSLEAQRCASLKLHVLSLSRN 1974
            VAVERVNKG+AII+YRGKNY RP  LRPKTLL+K+ AMKRSLEAQR  SLKLHVL L+RN
Sbjct: 666  VAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRN 725

Query: 1975 IDDLQHQMVKEHSTVDKMRLIESNKSEVEDSMNEQSRSIEXXXXXXXXXXXXXXXSMQLT 2154
            I+ L+ Q+VK+                      +++ S+E                MQ  
Sbjct: 726  IEKLKLQLVKD----------------------KEANSLETIDESILPLVKEEIGDMQPA 763

Query: 2155 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 2334
            E  +S+   E+N      V+  G   +      + +   AT +        ++  D++  
Sbjct: 764  ECMRSDTSHEVN------VQARGECGADLTSTESNDTGDATID-----GPPAIQQDKQTE 812

Query: 2335 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLQQEQVSM 2514
            ++T N+     +        +  +Q   E   + D++    S ++E          + S+
Sbjct: 813  SLTHNDFFAEGVASGTSSCPDNSMQEVMEYNTIVDAEQ--CSSDNE--------PRESSI 862

Query: 2515 SATSTLSQFSDEVEAELSYATAQSTMDPHIHEDRLKHYSDLENPFRAAPLSNRERLILRK 2694
             +  + S  ++ +E     A  +S +   I    + +    EN  RA  LSNR+RL+LRK
Sbjct: 863  ESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWN----ENNSRAIQLSNRDRLLLRK 918

Query: 2695 QALKMRKRPVLAVGRSNIVTGVAKTIKTHFKKHPLAIVNIKGRAEGTSVQEVIFELEQAT 2874
            QAL+M+KRPVLAVGRSNIVTGVAK IK HF+K+PLAIVN+KGRA+GTSVQEV+ +LE+AT
Sbjct: 919  QALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEAT 978

Query: 2875 GAVLVSREPNKVILYRGWG--EGETPGCDPNKKDVGKGSGGAREEKKVCPELIEAIRVEC 3048
            GAVLVS+EP+KVILYRGWG  +  +P    N +         R    V  EL+ AI++EC
Sbjct: 979  GAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLEC 1038

Query: 3049 GL 3054
            GL
Sbjct: 1039 GL 1040