BLASTX nr result
ID: Ophiopogon21_contig00009716
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00009716
(709 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18915.3| unnamed protein product [Vitis vinifera] 487 e-135
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 487 e-135
gb|ACD63083.1| RNA polymerase II largest subunit [Ceratophyllum ... 485 e-134
gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x sou... 485 e-134
gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron t... 485 e-134
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 484 e-134
gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi] 483 e-134
gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parvi... 483 e-134
gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri] 483 e-134
gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orient... 483 e-134
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 482 e-134
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 482 e-134
gb|KJB43257.1| hypothetical protein B456_007G190500 [Gossypium r... 482 e-134
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 482 e-134
ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 ... 482 e-134
ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 ... 482 e-134
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 482 e-134
gb|ACD63089.1| RNA polymerase II largest subunit [Persea americana] 482 e-133
gb|ACD63081.1| RNA polymerase II largest subunit [Asparagus offi... 482 e-133
ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II su... 481 e-133
>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
Length = 1565
Score = 487 bits (1254), Expect = e-135
Identities = 233/236 (98%), Positives = 236/236 (100%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 438 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 497
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 498 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 557
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 558 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 617
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI
Sbjct: 618 DGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 673
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 487 bits (1254), Expect = e-135
Identities = 233/236 (98%), Positives = 236/236 (100%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI
Sbjct: 570 DGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 625
>gb|ACD63083.1| RNA polymerase II largest subunit [Ceratophyllum demersum]
Length = 1010
Score = 485 bits (1249), Expect = e-134
Identities = 231/236 (97%), Positives = 236/236 (100%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 309 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 368
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 369 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 428
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 429 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 488
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRI
Sbjct: 489 DGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRI 544
>gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x soulangeana]
Length = 1010
Score = 485 bits (1249), Expect = e-134
Identities = 231/236 (97%), Positives = 236/236 (100%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 309 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 368
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 369 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 428
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 429 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 488
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRI
Sbjct: 489 DGKIPAPTILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRI 544
>gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron tulipifera]
Length = 1010
Score = 485 bits (1248), Expect = e-134
Identities = 230/236 (97%), Positives = 236/236 (100%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 309 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 368
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 369 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 428
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 429 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 488
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP++LKPRPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRI
Sbjct: 489 DGKIPAPAVLKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRI 544
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 484 bits (1246), Expect = e-134
Identities = 231/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 QDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINL+RTSAWHSESETGFITPGDTQVRI
Sbjct: 570 DGKIPAPAILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESETGFITPGDTQVRI 625
>gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi]
Length = 1009
Score = 483 bits (1244), Expect = e-134
Identities = 229/236 (97%), Positives = 236/236 (100%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNI+RLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 308 VTPYNIDRLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 367
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 368 NDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 427
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 428 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 487
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP++LKPRPLWTGKQVFNLIIPKQINLLRTSAWH+ESETGFITPGDTQVRI
Sbjct: 488 DGKIPAPAVLKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESETGFITPGDTQVRI 543
>gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parviflorum]
Length = 1013
Score = 483 bits (1244), Expect = e-134
Identities = 230/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 312 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 371
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 372 NDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 431
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 432 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 491
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINL+RTSAWHSESETGFITPGDT VRI
Sbjct: 492 DGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSESETGFITPGDTHVRI 547
>gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]
Length = 1010
Score = 483 bits (1244), Expect = e-134
Identities = 231/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 309 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 368
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 369 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 428
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 429 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 488
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINL+R SAWHSE+ETGFITPGDTQVRI
Sbjct: 489 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLIRQSAWHSETETGFITPGDTQVRI 544
>gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orientale]
Length = 1010
Score = 483 bits (1243), Expect = e-134
Identities = 232/236 (98%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPP GKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 309 VTPYNIERLKELVEYGPHPPVGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 368
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 369 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 428
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 429 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 488
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSE+ETGFITPGDTQVRI
Sbjct: 489 DGKVPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSENETGFITPGDTQVRI 544
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 482 bits (1241), Expect = e-134
Identities = 231/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETG ITPGDTQVRI
Sbjct: 570 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGSITPGDTQVRI 625
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 482 bits (1241), Expect = e-134
Identities = 231/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETG ITPGDTQVRI
Sbjct: 570 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGSITPGDTQVRI 625
>gb|KJB43257.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1664
Score = 482 bits (1241), Expect = e-134
Identities = 231/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 208 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 267
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 268 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 327
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 328 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 387
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETG ITPGDTQVRI
Sbjct: 388 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGSITPGDTQVRI 443
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 482 bits (1241), Expect = e-134
Identities = 231/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETG ITPGDTQVRI
Sbjct: 570 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGSITPGDTQVRI 625
>ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
cacao] gi|508698849|gb|EOX90745.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 5 [Theobroma cacao]
Length = 1512
Score = 482 bits (1241), Expect = e-134
Identities = 230/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 40 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 99
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 100 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 159
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 160 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 219
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLR SAWHSE+ETGFITPGDTQVRI
Sbjct: 220 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETETGFITPGDTQVRI 275
>ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
cacao] gi|508698848|gb|EOX90744.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 4 [Theobroma cacao]
Length = 1511
Score = 482 bits (1241), Expect = e-134
Identities = 230/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 40 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 99
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 100 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 159
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 160 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 219
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLR SAWHSE+ETGFITPGDTQVRI
Sbjct: 220 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETETGFITPGDTQVRI 275
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 482 bits (1241), Expect = e-134
Identities = 230/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 NDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINLLR SAWHSE+ETGFITPGDTQVRI
Sbjct: 570 DGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETETGFITPGDTQVRI 625
>gb|ACD63089.1| RNA polymerase II largest subunit [Persea americana]
Length = 1009
Score = 482 bits (1240), Expect = e-133
Identities = 230/236 (97%), Positives = 234/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRY KKSSDHHLELGYKVERHL
Sbjct: 308 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYSKKSSDHHLELGYKVERHL 367
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 368 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 427
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 428 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 487
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGK+PAP+ILKPRPLWTGKQVFNLIIPKQINL+ TSAWHSESETGFITPGDTQVRI
Sbjct: 488 DGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIXTSAWHSESETGFITPGDTQVRI 543
>gb|ACD63081.1| RNA polymerase II largest subunit [Asparagus officinalis]
Length = 1009
Score = 482 bits (1240), Expect = e-133
Identities = 231/236 (97%), Positives = 233/236 (98%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 310 VTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 369
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 370 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 429
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 430 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 489
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVP P+ILKPRPLWTGKQVFNLIIPKQINL R SAWHSESETGFITPGDTQVRI
Sbjct: 490 DGKVPTPAILKPRPLWTGKQVFNLIIPKQINLSRASAWHSESETGFITPGDTQVRI 545
>ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Gossypium
raimondii] gi|763750176|gb|KJB17564.1| hypothetical
protein B456_003G005700 [Gossypium raimondii]
gi|763750177|gb|KJB17565.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750178|gb|KJB17566.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750179|gb|KJB17567.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
Length = 1847
Score = 481 bits (1239), Expect = e-133
Identities = 229/236 (97%), Positives = 235/236 (99%)
Frame = -1
Query: 709 VTPYNIERLKELVEYGPHPPPGKTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHL 530
VTPYNIERLKELVEYGPHPPPGKTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHL
Sbjct: 390 VTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHL 449
Query: 529 NDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 350
NDGD+VLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE
Sbjct: 450 NDGDYVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE 509
Query: 349 TRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 170
TRAEV ELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF
Sbjct: 510 TRAEVAELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDF 569
Query: 169 DGKVPAPSILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 2
DGKVPAP+ILKPRPLWTGKQVFNLIIPKQINL+RTSAWHSESETGFITPGDTQVRI
Sbjct: 570 DGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESETGFITPGDTQVRI 625