BLASTX nr result

ID: Ophiopogon21_contig00009657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00009657
         (538 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008780263.1| PREDICTED: putative F-box protein At2g33200,...    61   4e-07
ref|XP_010276230.1| PREDICTED: F-box protein At3g56470-like [Nel...    60   8e-07
ref|XP_009395447.1| PREDICTED: F-box protein SKIP23-like [Musa a...    57   5e-06
ref|XP_010063093.1| PREDICTED: F-box protein SKIP23-like [Eucaly...    57   5e-06
gb|KCW70276.1| hypothetical protein EUGRSUZ_F03527 [Eucalyptus g...    57   5e-06

>ref|XP_008780263.1| PREDICTED: putative F-box protein At2g33200, partial [Phoenix
           dactylifera]
          Length = 352

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
 Frame = -2

Query: 489 NFAPWLDLPDYLTEKFLERLPFLDYARFGAVCPRWRSIQQNHRRR-HAPSPPRMLSLPWF 313
           N + W DL   + E  L RL  +D+ RFG  C  WRS +  HR R   P+P     LPW 
Sbjct: 30  NSSRWSDLSVDVLELILRRLGPVDHLRFGETCRSWRSARSLHRTRLDLPTP----QLPWL 85

Query: 312 VXXXXXXXXXXXPVDCFSPLEHRSHRIRLP--LSRRYLECGIESGGYRPRSWHSYEPNGW 139
           +            +  FSP + R + I +P    R+Y              W       W
Sbjct: 86  LSGPTSFLSKGYRLKFFSPSDGRRYTISIPKRTPRQY--------------WVPGSCANW 131

Query: 138 LVLDDESRGEEFYFTLLNPLSGVQIELPRV 49
           L+ D    G + +  L+NP +GV++ LPR+
Sbjct: 132 LITD---AGRDIF--LVNPFTGVELRLPRI 156


>ref|XP_010276230.1| PREDICTED: F-box protein At3g56470-like [Nelumbo nucifera]
          Length = 440

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 50/161 (31%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
 Frame = -2

Query: 480 PWL-DLPDYLTEKFLERLPFLDYARFGAVCPRWRSIQQNHRRRHAPSPPRMLSLPWFVXX 304
           PW  +LPD + E  L RL  LDY RF +VC  WRS+       ++        LPW +  
Sbjct: 48  PWCSELPDDIIELILRRLDVLDYIRFYSVCKLWRSVAVGMDLGYSLC---CRGLPWLMFT 104

Query: 303 XXXXXXXXXPVDCFSPLEHRSHRIRLPLSRRYLECGIESGGYRPRSWHSYEPNGWLVLDD 124
                        FS  E R + I LP +     C   S              GWL++ +
Sbjct: 105 CDAKTQTYGF---FSLSESRKYYIPLPTAGGLAHCCGSS-------------QGWLLMCN 148

Query: 123 ESRGEEFYFTLLNPLSGVQIELPRVGDCILGDYRLSVSPPP 1
            + G  F   LLNP SG +I+LPR+   +   Y++ +S PP
Sbjct: 149 SASGGCF---LLNPFSGAEIKLPRLSPPLA--YKVILSNPP 184


>ref|XP_009395447.1| PREDICTED: F-box protein SKIP23-like [Musa acuminata subsp.
           malaccensis]
          Length = 412

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 47/143 (32%), Positives = 55/143 (38%)
 Frame = -2

Query: 477 WLDLPDYLTEKFLERLPFLDYARFGAVCPRWRSIQQNHRRRHAPSPPRMLSLPWFVXXXX 298
           W DLP  L    LERLP  D  RF AVC  WRS    H     P PP+    PW +    
Sbjct: 4   WSDLPMELLGSILERLPVADRIRFAAVCSSWRSASGAH--LGCPPPPQS---PWLMLPFN 58

Query: 297 XXXXXXXPVDCFSPLEHRSHRIRLPLSRRYLECGIESGGYRPRSWHSYEPNGWLVLDDES 118
                      F  L  R    RLPL    +   +  G            +GWLV  D  
Sbjct: 59  PTFTPTGSAAAFFSLADRK-AYRLPLPDPPVSDRLVVG----------SSHGWLVTAD-- 105

Query: 117 RGEEFYFTLLNPLSGVQIELPRV 49
              +    LLNPL G Q+ LP +
Sbjct: 106 --ADSELQLLNPLMGEQVRLPSI 126


>ref|XP_010063093.1| PREDICTED: F-box protein SKIP23-like [Eucalyptus grandis]
           gi|702378763|ref|XP_010063094.1| PREDICTED: F-box
           protein SKIP23-like [Eucalyptus grandis]
           gi|629104808|gb|KCW70277.1| hypothetical protein
           EUGRSUZ_F03527 [Eucalyptus grandis]
           gi|629104809|gb|KCW70278.1| hypothetical protein
           EUGRSUZ_F03527 [Eucalyptus grandis]
           gi|629104810|gb|KCW70279.1| hypothetical protein
           EUGRSUZ_F03527 [Eucalyptus grandis]
          Length = 393

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 48/145 (33%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
 Frame = -2

Query: 483 APWLDLPDYLTEKFLERLPFL-DYARFGAVCPRWRSIQQNHRRRHAPSPPRMLSLPWFVX 307
           A W  LP  L E    RLP   DY RF AVCP WRS          P  P +L LP F  
Sbjct: 3   ADWSQLPSDLLESISGRLPLYGDYVRFRAVCPAWRSSTAKTPNHFPPQLPWLL-LPLFKP 61

Query: 306 XXXXXXXXXXPVDCFSPLEHRSHRIRL-PLSRRYLECGIESGGYRPRSWHSYEPNGWLVL 130
                         +S L+ + H +R+   S R   CG                +GWLV+
Sbjct: 62  QNRGRSCSGYF---YSLLDGKVHVLRITEASLRMRRCG--------------SSHGWLVV 104

Query: 129 DDESRGEEFYFTLLNPLSGVQIELP 55
            DES        L+NPL+G +++LP
Sbjct: 105 LDESPS----VALVNPLTGAKMDLP 125


>gb|KCW70276.1| hypothetical protein EUGRSUZ_F03527 [Eucalyptus grandis]
          Length = 227

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 48/145 (33%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
 Frame = -2

Query: 483 APWLDLPDYLTEKFLERLPFL-DYARFGAVCPRWRSIQQNHRRRHAPSPPRMLSLPWFVX 307
           A W  LP  L E    RLP   DY RF AVCP WRS          P  P +L LP F  
Sbjct: 3   ADWSQLPSDLLESISGRLPLYGDYVRFRAVCPAWRSSTAKTPNHFPPQLPWLL-LPLFKP 61

Query: 306 XXXXXXXXXXPVDCFSPLEHRSHRIRL-PLSRRYLECGIESGGYRPRSWHSYEPNGWLVL 130
                         +S L+ + H +R+   S R   CG                +GWLV+
Sbjct: 62  QNRGRSCSGYF---YSLLDGKVHVLRITEASLRMRRCG--------------SSHGWLVV 104

Query: 129 DDESRGEEFYFTLLNPLSGVQIELP 55
            DES        L+NPL+G +++LP
Sbjct: 105 LDESPS----VALVNPLTGAKMDLP 125


Top