BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00009611
         (1024 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380333.1| PREDICTED: DNA-directed RNA polymerases II a...   357   7e-96
ref|XP_010922037.1| PREDICTED: DNA-directed RNA polymerases II a...   350   1e-93
ref|XP_008788537.1| PREDICTED: DNA-directed RNA polymerases II a...   344   8e-92
ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea ma...   340   8e-91
ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II a...   340   1e-90
ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases II a...   340   1e-90
ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group] g...   337   1e-89
gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japo...   334   8e-89
emb|CDM85840.1| unnamed protein product [Triticum aestivum]           328   3e-87
dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgar...   328   6e-87
ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases II a...   327   7e-87
ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II a...   324   6e-86
ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II a...   323   1e-85
ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II a...   322   2e-85
ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II a...   319   2e-84
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   317   8e-84
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a...   314   6e-83
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ...   311   4e-82
ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II a...   311   4e-82
ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II a...   311   5e-82

>ref|XP_009380333.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Musa acuminata subsp. malaccensis]
          Length = 204

 Score =  357 bits (917), Expect = 7e-96
 Identities = 170/202 (84%), Positives = 196/202 (97%)
 Frame = -1

Query: 847 EQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRNDP 668
           ++TI RLFRIRRTVM+MLRDRGYLVVD EI M+K++F+HKFGEGVKR+DL++NKS++NDP
Sbjct: 3   DETIGRLFRIRRTVMQMLRDRGYLVVDFEINMTKLDFLHKFGEGVKREDLLINKSRKNDP 62

Query: 667 SDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHLE 488
           +DQIYVFFPND+KVGMKHIKKYVELMK+++VPRAILV+QQNLTPFAK+Y+QEL+PK+HLE
Sbjct: 63  TDQIYVFFPNDEKVGMKHIKKYVELMKAESVPRAILVLQQNLTPFAKSYLQELSPKYHLE 122

Query: 487 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKRG 308
           VF EAELLVNIK+HVLV EHQ+LT EEKKTLLERYTLKETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 123 VFQEAELLVNIKDHVLVAEHQMLTNEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRG 182

Query: 307 QVVKIIRPSETAGRYVTYRYVV 242
           QVVKIIRPSETAGRYVTYRYVV
Sbjct: 183 QVVKIIRPSETAGRYVTYRYVV 204


>ref|XP_010922037.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X1 [Elaeis guineensis]
          Length = 204

 Score =  350 bits (897), Expect = 1e-93
 Identities = 169/205 (82%), Positives = 194/205 (94%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           MAD+  I RL RIRRTVM+ML+DRGYLVVD EI MSK++F+HKFGEGVKR+DL++NKSK+
Sbjct: 1   MADDP-IGRLHRIRRTVMQMLKDRGYLVVDFEINMSKIDFLHKFGEGVKREDLLINKSKK 59

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDP+DQIYVFFPNDDKVG+KHIKKY ELMK ++VPRAILV+QQNLTPFA++Y+QEL+PK+
Sbjct: 60  NDPADQIYVFFPNDDKVGVKHIKKYAELMKVESVPRAILVLQQNLTPFARSYLQELSPKY 119

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           H E+F EAELL+NIKEHVLVP+HQ+LT EEKKTLLERYTLKETQLPRIQ+TDPVARYYGL
Sbjct: 120 HSEIFQEAELLINIKEHVLVPKHQLLTNEEKKTLLERYTLKETQLPRIQVTDPVARYYGL 179

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 180 KRGQVVKIIRPSETAGRYVTYRYVV 204


>ref|XP_008788537.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X1 [Phoenix dactylifera]
          Length = 204

 Score =  344 bits (882), Expect = 8e-92
 Identities = 165/205 (80%), Positives = 193/205 (94%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           MAD+  I RL+RIR+TVM MLRDRGYLVVD EI M+K++F+HKFGEGVKR+DL++NKSK+
Sbjct: 1   MADD-LIGRLYRIRQTVMLMLRDRGYLVVDFEINMTKIDFLHKFGEGVKREDLLINKSKK 59

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDP+DQIYVFFPND+KVG+K IKKY ELMK+++VPRAILV+QQNLTPFA +Y+QEL+PK+
Sbjct: 60  NDPADQIYVFFPNDEKVGVKQIKKYAELMKAESVPRAILVLQQNLTPFATSYLQELSPKY 119

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLE+F EAELL+NIK+HVLVPEHQ+LT EEKKTLLERYTLKETQ PRIQ+TDPVARYYGL
Sbjct: 120 HLEIFQEAELLINIKDHVLVPEHQLLTNEEKKTLLERYTLKETQFPRIQVTDPVARYYGL 179

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRY+V
Sbjct: 180 KRGQVVKIIRPSETAGRYVTYRYIV 204


>ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea mays]
           gi|226533456|ref|NP_001152590.1| DNA-directed RNA
           polymerases II 24 kDa polypeptide [Zea mays]
           gi|194703030|gb|ACF85599.1| unknown [Zea mays]
           gi|195657875|gb|ACG48405.1| DNA-directed RNA polymerases
           II 24 kDa polypeptide [Zea mays]
           gi|413952167|gb|AFW84816.1| DNA-directed RNA polymerase
           II polypeptide [Zea mays]
          Length = 210

 Score =  340 bits (873), Expect = 8e-91
 Identities = 162/205 (79%), Positives = 186/205 (90%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + DE T+ RL+RIRRTVM+MLRDRGYLVVDHE+  S+ +F+ KFGE   R+DL++NK K+
Sbjct: 6   VTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINKYKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDPSDQIYVFFPNDDKVGMKHIKKYVE+M  +NV RA+LV+QQNLTPFAK+++ EL PK 
Sbjct: 66  NDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLE+F EAE+L+NIKEHVLVPEHQVLT EEKKTLLERYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           +RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210


>ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Oryza brachyantha]
          Length = 210

 Score =  340 bits (871), Expect = 1e-90
 Identities = 160/205 (78%), Positives = 187/205 (91%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + +E  + RL RIRRTVM+MLRDRGYLVV+HE+ M + +F+ KFGE   R+DL++NK K+
Sbjct: 6   VTEEAMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKFGESFHREDLLINKYKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDPSDQIYVFFPNDDKVGMKHIKKYVE+MK++NV RA+LV+QQNLTPFA++++QEL PK 
Sbjct: 66  NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLE+F EAELL+NIKEHVL+PEHQVLT EEKKTLLERYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLIPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           +RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210


>ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Setaria italica] gi|944243077|gb|KQL07385.1|
           hypothetical protein SETIT_002922mg [Setaria italica]
          Length = 210

 Score =  340 bits (871), Expect = 1e-90
 Identities = 163/205 (79%), Positives = 186/205 (90%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + DE T+ RL+RIRRTVM+MLRDRGYLVV+HE+  S+ +F+ KFGE   R+DL++NK K+
Sbjct: 6   VTDEVTMGRLYRIRRTVMQMLRDRGYLVVEHELATSRRDFLRKFGESFHREDLLINKYKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDPSDQIYVFFPNDDKVGMKHIKKYVE+M  +NV RA+LV+QQNLTPFAK+++ EL PK 
Sbjct: 66  NDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLE+F EAELL+NIKEHVLVPEHQVLT EEKKTLLERYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 KRGQVVKIIRPSETAGRYVTYRYVV 210


>ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group]
           gi|55296830|dbj|BAD68174.1| putative DNA-directed RNA
           polymerase II 23K chain [Oryza sativa Japonica Group]
           gi|113534095|dbj|BAF06478.1| Os01g0805800 [Oryza sativa
           Japonica Group] gi|215737136|dbj|BAG96065.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765546|dbj|BAG87243.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218189238|gb|EEC71665.1| hypothetical protein
           OsI_04128 [Oryza sativa Indica Group]
           gi|937898852|dbj|BAS74832.1| Os01g0805800 [Oryza sativa
           Japonica Group]
          Length = 210

 Score =  337 bits (863), Expect = 1e-89
 Identities = 159/205 (77%), Positives = 186/205 (90%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + +E  + RL RIRRTVM+MLRDRGYLVV+HE+ M + +F+ K+GE   R+DL++NK K+
Sbjct: 6   VTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDPSDQIYVFFPNDDKVGMKHIKKYVE+MK++NV RA+LV+QQNLTPFA++++QEL PK 
Sbjct: 66  NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLE+F EAELL+NIKEHVLVPEHQVL  EEKKTLLERYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           +RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210


>gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japonica Group]
          Length = 210

 Score =  334 bits (856), Expect = 8e-89
 Identities = 158/205 (77%), Positives = 185/205 (90%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + +E  + RL RIRRTVM+MLRDRGYLVV+HE+ M + +F+ K+GE   R+DL++NK K+
Sbjct: 6   VTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDPSDQIYVFFPNDDKVGMKHIKKYVE+MK++NV RA+LV+QQNLTPFA++++QEL PK 
Sbjct: 66  NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLE+F EAELL+NIKEHVLVPEHQVL   EKKTLLERYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLNNGEKKTLLERYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           +RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 RRGQVVKIIRPSETAGRYVTYRYVV 210


>emb|CDM85840.1| unnamed protein product [Triticum aestivum]
          Length = 210

 Score =  328 bits (842), Expect = 3e-87
 Identities = 156/205 (76%), Positives = 183/205 (89%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + ++ T+ RL RIRRTVM MLRDRGYLVV+HE+ M++ +F  K+GE   R+D+++NK K+
Sbjct: 6   VTEDVTVGRLVRIRRTVMHMLRDRGYLVVEHELSMTRRDFQRKYGESFHREDMLINKCKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDP+DQIYVFFPND+KVGMKHIKKYVE+M ++ V RAILVVQQNLTPFAK+++QEL PK 
Sbjct: 66  NDPNDQIYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAILVVQQNLTPFAKSFLQELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLEVF +AE+L+NIKEHVLVPEHQVL  EEKKTLL RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEVFQDAEMLINIKEHVLVPEHQVLANEEKKTLLARYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 KRGQVVKIIRPSETAGRYVTYRYVV 210


>dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326504136|dbj|BAK02854.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326511589|dbj|BAJ91939.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score =  328 bits (840), Expect = 6e-87
 Identities = 156/205 (76%), Positives = 183/205 (89%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + ++ T+ RL RIRRTVM MLRDRGYLVV+HE+ M++ +F  K+GE   R+D+++NK K+
Sbjct: 6   VTEDVTVGRLVRIRRTVMHMLRDRGYLVVEHELSMTRRDFQRKYGETFHREDMLINKCKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDP+DQIYVFFPND+KVGMKHIKKYVE+M ++ V RAILVVQQNLTPFAK+++QEL PK 
Sbjct: 66  NDPNDQIYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAILVVQQNLTPFAKSFLQELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLEVF +AE+L+NIKEHVLVPEHQVL  EEKKTLL RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEVFQDAEMLINIKEHVLVPEHQVLANEEKKTLLARYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 KRGQVVKIIRPSETAGRYVTYRYVV 210


>ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Brachypodium distachyon] gi|944074733|gb|KQK10217.1|
           hypothetical protein BRADI_2g52777 [Brachypodium
           distachyon]
          Length = 210

 Score =  327 bits (839), Expect = 7e-87
 Identities = 155/205 (75%), Positives = 183/205 (89%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           + D+  + RL RIR TVM MLRDRGYLVV+HE+ M++ +F  K+GE   R+DL++NK K+
Sbjct: 6   VTDDAGVGRLVRIRSTVMHMLRDRGYLVVEHELAMTRRDFERKYGESFHREDLLINKCKK 65

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           NDP+DQIYVFFPND+KVGMKHIKKYVE+M ++ V RA++VVQQNLTPFAK+++QEL PK 
Sbjct: 66  NDPNDQIYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAVVVVQQNLTPFAKSFLQELEPKI 125

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLEVF +AE+L+NIKEHVLVPEHQVLT +EKKTLLERYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEVFQDAEMLINIKEHVLVPEHQVLTNDEKKTLLERYTLKETQLPRIQITDPIARYYGL 185

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 186 KRGQVVKIIRPSETAGRYVTYRYVV 210


>ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Elaeis guineensis] gi|743814587|ref|XP_010930085.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Elaeis guineensis]
           gi|743814591|ref|XP_010930086.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like [Elaeis
           guineensis]
          Length = 204

 Score =  324 bits (831), Expect = 6e-86
 Identities = 159/202 (78%), Positives = 184/202 (91%)
 Frame = -1

Query: 847 EQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRNDP 668
           E  ISRLFRIRRTVM+MLRDRGYLV+D EI M+K++F+ KFGEGVKR+DL++NK+K+NDP
Sbjct: 3   EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDP 62

Query: 667 SDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHLE 488
           +DQIYVFFPND KVG+K IK+YVE MK++NV R ILVVQQ LTPFA+  + E++ K+ LE
Sbjct: 63  ADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEVSQKYMLE 122

Query: 487 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKRG 308
           VF + ELLVNIKEHVLVPEHQVLT+EEKKTLLERYTLKETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 123 VFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRG 182

Query: 307 QVVKIIRPSETAGRYVTYRYVV 242
           QVVKIIRPSETAGRYVTYRYVV
Sbjct: 183 QVVKIIRPSETAGRYVTYRYVV 204


>ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Phoenix dactylifera] gi|672163987|ref|XP_008801857.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Phoenix dactylifera]
          Length = 204

 Score =  323 bits (829), Expect = 1e-85
 Identities = 161/202 (79%), Positives = 182/202 (90%)
 Frame = -1

Query: 847 EQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRNDP 668
           E  I RLFRIRRTVM+MLRDRGYLV+D EI M+K +F+ KFGEGVKRDDL++NK+K+NDP
Sbjct: 3   EDDIGRLFRIRRTVMQMLRDRGYLVLDLEINMNKNQFLEKFGEGVKRDDLVINKAKKNDP 62

Query: 667 SDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHLE 488
           +DQIYVFFPND KVG+K IK+YVE MK++NV R ILVVQQ LTPFAK  + E+  K+ LE
Sbjct: 63  ADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFAKQSLTEVAQKYLLE 122

Query: 487 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKRG 308
           VF +AELLVNIK+HVLVPEHQVLT+EEKKTLLERYTLKETQLPRIQ+TDPVARYYGLKRG
Sbjct: 123 VFQDAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPVARYYGLKRG 182

Query: 307 QVVKIIRPSETAGRYVTYRYVV 242
           QVVKIIRPSETAGRYVTYRYVV
Sbjct: 183 QVVKIIRPSETAGRYVTYRYVV 204


>ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Elaeis guineensis] gi|743809116|ref|XP_010928512.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Elaeis guineensis]
          Length = 204

 Score =  322 bits (826), Expect = 2e-85
 Identities = 159/202 (78%), Positives = 183/202 (90%)
 Frame = -1

Query: 847 EQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRNDP 668
           E  ISRLFRIRRTVM+MLRDRGYLV+D EI M+K +F+ KFGEGVKR+DL++NK+K+NDP
Sbjct: 3   EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKRQFLEKFGEGVKREDLVINKAKKNDP 62

Query: 667 SDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHLE 488
           +DQIYVFFPND KVG+K IK+YVE MK++NV R ILVVQQ LTPFA+  + E++ K+ LE
Sbjct: 63  ADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFARQSLAEVSHKYMLE 122

Query: 487 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKRG 308
           VF ++ELLVNIKEHVLVPEHQVLT EEKKTLLERYTLKETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 123 VFQDSELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRG 182

Query: 307 QVVKIIRPSETAGRYVTYRYVV 242
           QVVKIIRPSETAGRYVTYRYVV
Sbjct: 183 QVVKIIRPSETAGRYVTYRYVV 204


>ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Amborella trichopoda] gi|548863022|gb|ERN20377.1|
           hypothetical protein AMTR_s00068p00034280 [Amborella
           trichopoda]
          Length = 206

 Score =  319 bits (818), Expect = 2e-84
 Identities = 158/203 (77%), Positives = 184/203 (90%)
 Frame = -1

Query: 850 DEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRND 671
           D+QT S+LFRIRRT+M+MLRDRGYLV D EI M+K +FI KFG+ VK+DDL++NK+ RN+
Sbjct: 5   DDQT-SKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63

Query: 670 PSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHL 491
           PS+QIYVFFP + KVG+K +K Y E MKS+NV RAILV+QQNLTPFA+  +QE++ KFHL
Sbjct: 64  PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123

Query: 490 EVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKR 311
           E+F E+ELLVNIKEHVLVPEHQVLT+EEKKTLLERYTLKETQLPRIQITDP+ARYYGLKR
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183

Query: 310 GQVVKIIRPSETAGRYVTYRYVV 242
           GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  317 bits (813), Expect = 8e-84
 Identities = 160/205 (78%), Positives = 182/205 (88%)
 Frame = -1

Query: 856 MADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKR 677
           ++DE+ I RLFRIRRTVM+MLRDRGY V D EI MSK +FI KFGE +KR+DL++NK+ R
Sbjct: 3   LSDEE-IKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALR 61

Query: 676 NDPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKF 497
           ND SDQIYVFFP++ KVG+K +K Y   MKS+NV RAILVVQQNLTPFA+  IQE++ KF
Sbjct: 62  NDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKF 121

Query: 496 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGL 317
           HLEVF EAELLVNIKEHVLVPEHQVLT EEKKTLL+RYT+KETQLPRIQ+TDP+ARYYGL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGL 181

Query: 316 KRGQVVKIIRPSETAGRYVTYRYVV 242
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera]
          Length = 206

 Score =  314 bits (805), Expect = 6e-83
 Identities = 154/204 (75%), Positives = 180/204 (88%)
 Frame = -1

Query: 853 ADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRN 674
           A E+ ISRLFRIR+TVM+ML+DRGY V D EI M+K +F+ KFGE +KR+DL++NK+KR 
Sbjct: 3   ASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRT 62

Query: 673 DPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFH 494
           D SDQIYVFFP + KVG+K +K Y   MKS+NV RAILVVQQNLTPFA+  I E++ KFH
Sbjct: 63  DSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH 122

Query: 493 LEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLK 314
           LEVF EAELLVNIKEHVLVPEHQVLT+EEKKTLLERYT+KETQLPRIQ++DP+ARY+GLK
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLK 182

Query: 313 RGQVVKIIRPSETAGRYVTYRYVV 242
           RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 183 RGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
           polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  311 bits (798), Expect = 4e-82
 Identities = 152/201 (75%), Positives = 177/201 (88%)
 Frame = -1

Query: 847 EQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRNDP 668
           E  I+RLFRIRRTVM+MLRDR YLV D E+ M+K +F +K+GE +KR+DL++NKS+RND 
Sbjct: 5   EDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDS 64

Query: 667 SDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHLE 488
            DQIYVFFP + KVG+K +K Y+  MKS+NV RA+LVVQQNLTPFA+  I E++ KFHLE
Sbjct: 65  PDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLE 124

Query: 487 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKRG 308
           VF EAELLVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRG 184

Query: 307 QVVKIIRPSETAGRYVTYRYV 245
           QVVKIIRPSETAGRY+TYRYV
Sbjct: 185 QVVKIIRPSETAGRYITYRYV 205


>ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Nelumbo nucifera] gi|720057870|ref|XP_010274104.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Nelumbo nucifera]
          Length = 206

 Score =  311 bits (798), Expect = 4e-82
 Identities = 155/204 (75%), Positives = 178/204 (87%)
 Frame = -1

Query: 853 ADEQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRN 674
           + E  I+RLFRIRRTV++ML+DRGYLV D E+ M++ +F+ K+GE VKR+DL++NK+KRN
Sbjct: 3   SSEDEITRLFRIRRTVIQMLKDRGYLVGDFELNMTRSQFVSKYGENVKREDLVINKAKRN 62

Query: 673 DPSDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFH 494
           D SDQI+VFFP + KVG+K +K Y   MKS+NV RAILVVQQNLT FAK  I E+  KFH
Sbjct: 63  DSSDQIFVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTAFAKTCINEIAAKFH 122

Query: 493 LEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLK 314
           LEVF EAELLVNIKEHVLVPEHQVLT+EEKKTLLERYTLKETQLPRIQI DP+ARYYGLK
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQIGDPIARYYGLK 182

Query: 313 RGQVVKIIRPSETAGRYVTYRYVV 242
           RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 183 RGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Jatropha curcas] gi|802658502|ref|XP_012080621.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Jatropha curcas]
           gi|643720408|gb|KDP30787.1| hypothetical protein
           JCGZ_13730 [Jatropha curcas]
          Length = 206

 Score =  311 bits (797), Expect = 5e-82
 Identities = 150/202 (74%), Positives = 178/202 (88%)
 Frame = -1

Query: 847 EQTISRLFRIRRTVMEMLRDRGYLVVDHEIKMSKMEFIHKFGEGVKRDDLMLNKSKRNDP 668
           E  I RLFRIR+TVM+ML+DRGYLV D+EI M++ +FI K+GE +KR+DL++NKS+RN+P
Sbjct: 5   EDEIKRLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSRRNEP 64

Query: 667 SDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKAYIQELTPKFHLE 488
           SDQIYVFFP + KVG+K +K Y   MK++NV RA+LVVQQNLTPFA+  I E+  KF LE
Sbjct: 65  SDQIYVFFPEEQKVGVKTMKTYTNRMKNENVYRAVLVVQQNLTPFARTCISEIASKFQLE 124

Query: 487 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPVARYYGLKRG 308
           VF EAELLVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDP+ARY+GLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRG 184

Query: 307 QVVKIIRPSETAGRYVTYRYVV 242
           QVVKIIRPSETAGRY+TYR+VV
Sbjct: 185 QVVKIIRPSETAGRYITYRFVV 206